data_ZMB
# 
_chem_comp.id                                    ZMB 
_chem_comp.name                                  "methyl (2S)-3-[(2-acetamido-2-deoxy-beta-D-glucopyranosyl)oxy]-2-methylpropanoate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H23 N O8" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-14 
_chem_comp.pdbx_modified_date                    2023-05-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        321.324 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ZMB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8GEZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ZMB C1  C1  C 0 1 N N N 30.614 64.675 -10.431 6.489  -0.841 0.452  C1  ZMB 1  
ZMB C10 C2  C 0 1 N N R 31.939 63.239 -16.922 -3.162 0.438  0.397  C10 ZMB 2  
ZMB C11 C3  C 0 1 N N R 31.677 63.411 -15.427 -1.810 0.993  -0.062 C11 ZMB 3  
ZMB C12 C4  C 0 1 N N N 29.491 62.995 -14.295 -0.754 3.188  -0.009 C12 ZMB 4  
ZMB C13 C5  C 0 1 N N N 28.555 61.925 -13.822 -0.508 4.523  0.647  C13 ZMB 5  
ZMB C2  C6  C 0 1 N N N 31.523 62.551 -10.945 4.150  -0.430 0.255  C2  ZMB 6  
ZMB C3  C7  C 0 1 N N S 32.756 61.795 -11.443 2.961  0.322  -0.284 C3  ZMB 7  
ZMB C4  C8  C 0 1 N N N 32.316 60.455 -12.015 2.945  0.225  -1.811 C4  ZMB 8  
ZMB C5  C9  C 0 1 N N N 33.607 62.585 -12.421 1.674  -0.285 0.280  C5  ZMB 9  
ZMB C6  C10 C 0 1 N N R 32.970 63.099 -14.660 -0.703 0.015  0.337  C6  ZMB 10 
ZMB C7  C11 C 0 1 N N R 34.359 63.740 -16.483 -2.198 -1.855 0.191  C7  ZMB 11 
ZMB C8  C12 C 0 1 N N N 35.536 64.635 -16.790 -2.363 -3.227 -0.465 C8  ZMB 12 
ZMB C9  C13 C 0 1 N N S 33.148 64.066 -17.354 -3.365 -0.951 -0.214 C9  ZMB 13 
ZMB N1  N1  N 0 1 N N N 30.582 62.583 -14.958 -1.571 2.290  0.576  N1  ZMB 14 
ZMB O1  O1  O 0 1 N N N 31.764 63.847 -10.735 5.392  -0.071 -0.106 O1  ZMB 15 
ZMB O2  O2  O 0 1 N N N 30.450 62.025 -10.772 3.985  -1.358 1.012  O2  ZMB 16 
ZMB O3  O3  O 0 1 N N N 32.725 63.294 -13.300 0.555  0.499  -0.138 O3  ZMB 17 
ZMB O4  O4  O 0 1 N N N 34.022 63.952 -15.098 -0.970 -1.265 -0.239 O4  ZMB 18 
ZMB O5  O5  O 0 1 N N N 36.679 64.315 -15.996 -1.338 -4.105 0.004  O5  ZMB 19 
ZMB O6  O6  O 0 1 N N N 33.499 63.792 -18.708 -4.590 -1.510 0.266  O6  ZMB 20 
ZMB O7  O7  O 0 1 N N N 30.785 63.569 -17.689 -4.209 1.310  -0.034 O7  ZMB 21 
ZMB O8  O8  O 0 1 N N N 29.268 64.180 -14.079 -0.216 2.923  -1.063 O8  ZMB 22 
ZMB H1  H1  H 0 1 N N N 30.940 65.715 -10.280 6.389  -1.885 0.155  H1  ZMB 23 
ZMB H2  H2  H 0 1 N N N 29.900 64.632 -11.267 7.435  -0.447 0.080  H2  ZMB 24 
ZMB H3  H3  H 0 1 N N N 30.129 64.306 -9.515  6.468  -0.768 1.540  H3  ZMB 25 
ZMB H4  H4  H 0 1 N N N 32.186 62.181 -17.093 -3.175 0.363  1.485  H4  ZMB 26 
ZMB H5  H5  H 0 1 N N N 31.426 64.467 -15.247 -1.816 1.116  -1.145 H5  ZMB 27 
ZMB H6  H6  H 0 1 N N N 27.709 62.386 -13.292 -1.249 5.242  0.297  H6  ZMB 28 
ZMB H7  H7  H 0 1 N N N 28.181 61.357 -14.686 -0.588 4.416  1.729  H7  ZMB 29 
ZMB H8  H8  H 0 1 N N N 29.089 61.246 -13.141 0.491  4.875  0.390  H8  ZMB 30 
ZMB H9  H9  H 0 1 N N N 33.382 61.583 -10.564 3.028  1.369  0.013  H9  ZMB 31 
ZMB H10 H10 H 0 1 N N N 31.704 59.922 -11.272 2.085  0.769  -2.201 H10 ZMB 32 
ZMB H11 H11 H 0 1 N N N 31.723 60.622 -12.926 3.861  0.657  -2.212 H11 ZMB 33 
ZMB H12 H12 H 0 1 N N N 33.203 59.852 -12.260 2.877  -0.822 -2.107 H12 ZMB 34 
ZMB H13 H13 H 0 1 N N N 34.242 61.900 -13.002 1.562  -1.304 -0.090 H13 ZMB 35 
ZMB H14 H14 H 0 1 N N N 34.241 63.298 -11.873 1.724  -0.296 1.368  H14 ZMB 36 
ZMB H15 H15 H 0 1 N N N 33.239 62.049 -14.850 -0.672 -0.075 1.423  H15 ZMB 37 
ZMB H16 H16 H 0 1 N N N 34.648 62.691 -16.648 -2.186 -1.969 1.275  H16 ZMB 38 
ZMB H17 H17 H 0 1 N N N 35.800 64.522 -17.852 -3.339 -3.638 -0.207 H17 ZMB 39 
ZMB H18 H18 H 0 1 N N N 35.249 65.678 -16.593 -2.286 -3.124 -1.547 H18 ZMB 40 
ZMB H19 H19 H 0 1 N N N 32.906 65.132 -17.235 -3.402 -0.869 -1.301 H19 ZMB 41 
ZMB H20 H20 H 0 1 N N N 30.647 61.604 -15.149 -2.001 2.503  1.419  H20 ZMB 42 
ZMB H21 H21 H 0 1 N N N 37.394 64.899 -16.220 -1.380 -4.996 -0.371 H21 ZMB 43 
ZMB H22 H22 H 0 1 N N N 34.252 64.317 -18.953 -4.784 -2.391 -0.082 H22 ZMB 44 
ZMB H23 H23 H 0 1 N N N 30.050 63.041 -17.400 -5.094 1.019  0.223  H23 ZMB 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ZMB O6  C9  SING N N 1  
ZMB O7  C10 SING N N 2  
ZMB C9  C10 SING N N 3  
ZMB C9  C7  SING N N 4  
ZMB C10 C11 SING N N 5  
ZMB C8  C7  SING N N 6  
ZMB C8  O5  SING N N 7  
ZMB C7  O4  SING N N 8  
ZMB C11 N1  SING N N 9  
ZMB C11 C6  SING N N 10 
ZMB O4  C6  SING N N 11 
ZMB N1  C12 SING N N 12 
ZMB C6  O3  SING N N 13 
ZMB C12 O8  DOUB N N 14 
ZMB C12 C13 SING N N 15 
ZMB O3  C5  SING N N 16 
ZMB C5  C3  SING N N 17 
ZMB C4  C3  SING N N 18 
ZMB C3  C2  SING N N 19 
ZMB C2  O2  DOUB N N 20 
ZMB C2  O1  SING N N 21 
ZMB O1  C1  SING N N 22 
ZMB C1  H1  SING N N 23 
ZMB C1  H2  SING N N 24 
ZMB C1  H3  SING N N 25 
ZMB C10 H4  SING N N 26 
ZMB C11 H5  SING N N 27 
ZMB C13 H6  SING N N 28 
ZMB C13 H7  SING N N 29 
ZMB C13 H8  SING N N 30 
ZMB C3  H9  SING N N 31 
ZMB C4  H10 SING N N 32 
ZMB C4  H11 SING N N 33 
ZMB C4  H12 SING N N 34 
ZMB C5  H13 SING N N 35 
ZMB C5  H14 SING N N 36 
ZMB C6  H15 SING N N 37 
ZMB C7  H16 SING N N 38 
ZMB C8  H17 SING N N 39 
ZMB C8  H18 SING N N 40 
ZMB C9  H19 SING N N 41 
ZMB N1  H20 SING N N 42 
ZMB O5  H21 SING N N 43 
ZMB O6  H22 SING N N 44 
ZMB O7  H23 SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ZMB SMILES           ACDLabs              12.01 "O=C(OC)C(C)COC1OC(CO)C(O)C(O)C1NC(C)=O"                                                                                                                 
ZMB InChI            InChI                1.06  "InChI=1S/C13H23NO8/c1-6(12(19)20-3)5-21-13-9(14-7(2)16)11(18)10(17)8(4-15)22-13/h6,8-11,13,15,17-18H,4-5H2,1-3H3,(H,14,16)/t6-,8+,9+,10+,11+,13+/m0/s1" 
ZMB InChIKey         InChI                1.06  LMSXTPOWCBFQKY-BCPRKZQJSA-N                                                                                                                              
ZMB SMILES_CANONICAL CACTVS               3.385 "COC(=O)[C@@H](C)CO[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1NC(C)=O"                                                                                      
ZMB SMILES           CACTVS               3.385 "COC(=O)[CH](C)CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1NC(C)=O"                                                                                               
ZMB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](CO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)NC(=O)C)C(=O)OC"                                                                                    
ZMB SMILES           "OpenEye OEToolkits" 2.0.7 "CC(COC1C(C(C(C(O1)CO)O)O)NC(=O)C)C(=O)OC"                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ZMB "SYSTEMATIC NAME" ACDLabs              12.01 "methyl (2S)-3-[(2-acetamido-2-deoxy-beta-D-glucopyranosyl)oxy]-2-methylpropanoate"                                                  
ZMB "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "methyl (2~{S})-3-[(2~{R},3~{R},4~{R},5~{S},6~{R})-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-methyl-propanoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ZMB "Create component" 2023-03-14 RCSB 
ZMB "Initial release"  2023-05-24 RCSB 
# 
