data_2YC
# 
_chem_comp.id                                    2YC 
_chem_comp.name                                  "N~6~-{[(2S,3S)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C12 H21 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-04-14 
_chem_comp.pdbx_modified_date                    2014-04-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        255.313 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     2YC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4Q3A 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
2YC O2  O2  O 0 1 N Y N 12.528 42.846 -16.369 -6.295 -0.263 -1.525 O2  2YC 1  
2YC C6  C6  C 0 1 N N N 11.800 41.998 -16.900 -5.879 -0.322 -0.250 C6  2YC 2  
2YC O1  O1  O 0 1 N N N 12.158 41.440 -18.063 -6.462 -1.022 0.544  O1  2YC 3  
2YC C5  C5  C 0 1 N N S 10.504 41.587 -16.262 -4.685 0.485  0.191  C5  2YC 4  
2YC N1  N1  N 0 1 N N N 10.585 41.727 -14.822 -4.712 0.640  1.651  N1  2YC 5  
2YC C4  C4  C 0 1 N N N 9.363  42.439 -16.801 -3.401 -0.238 -0.221 C4  2YC 6  
2YC C3  C3  C 0 1 N N N 8.027  42.115 -16.142 -2.193 0.638  0.114  C3  2YC 7  
2YC C2  C2  C 0 1 N N N 6.906  42.870 -16.822 -0.909 -0.085 -0.298 C2  2YC 8  
2YC C1  C1  C 0 1 N N N 5.538  42.382 -16.378 0.300  0.791  0.038  C1  2YC 9  
2YC N   N   N 0 1 N N N 4.463  43.237 -16.845 1.530  0.100  -0.357 N   2YC 10 
2YC C   C   C 0 1 N N N 3.767  42.930 -17.945 2.727  0.685  -0.156 C   2YC 11 
2YC O   O   O 0 1 N N N 4.004  41.921 -18.592 2.786  1.785  0.352  O   2YC 12 
2YC C7  C7  C 0 1 N N S 2.677  43.867 -18.403 3.991  -0.027 -0.562 C7  2YC 13 
2YC C10 C10 C 0 1 N N S 3.171  44.758 -19.544 4.423  -1.025 0.537  C10 2YC 14 
2YC C11 C11 C 0 1 N N N 2.112  44.961 -20.623 3.993  -2.451 0.188  C11 2YC 15 
2YC C9  C9  C 0 1 N N N 3.590  46.076 -18.907 5.963  -0.876 0.478  C9  2YC 16 
2YC C8  C8  C 0 1 N N N 2.860  45.986 -17.604 6.168  0.498  -0.122 C8  2YC 17 
2YC N2  N2  N 0 1 N N N 2.344  44.852 -17.393 5.101  0.927  -0.668 N2  2YC 18 
2YC H1  H1  H 0 1 N N N 13.296 42.987 -16.909 -7.066 -0.798 -1.761 H1  2YC 19 
2YC H2  H2  H 0 1 N Y N 10.303 40.536 -16.516 -4.716 1.467  -0.280 H2  2YC 20 
2YC H3  H3  H 0 1 N N N 9.717  41.450 -14.410 -5.518 1.171  1.944  H3  2YC 21 
2YC H4  H4  H 0 1 N N N 11.320 41.146 -14.472 -4.684 -0.257 2.111  H4  2YC 22 
2YC H6  H6  H 0 1 N N N 9.598  43.498 -16.619 -3.326 -1.182 0.318  H6  2YC 23 
2YC H7  H7  H 0 1 N N N 9.274  42.264 -17.883 -3.422 -0.433 -1.294 H7  2YC 24 
2YC H8  H8  H 0 1 N N N 8.067  42.403 -15.081 -2.267 1.582  -0.425 H8  2YC 25 
2YC H9  H9  H 0 1 N N N 7.836  41.035 -16.221 -2.172 0.833  1.186  H9  2YC 26 
2YC H10 H10 H 0 1 N N N 6.995  42.734 -17.910 -0.834 -1.029 0.241  H10 2YC 27 
2YC H11 H11 H 0 1 N N N 6.998  43.938 -16.577 -0.929 -0.279 -1.370 H11 2YC 28 
2YC H12 H12 H 0 1 N N N 5.514  42.354 -15.279 0.225  1.736  -0.502 H12 2YC 29 
2YC H13 H13 H 0 1 N N N 5.380  41.368 -16.774 0.321  0.986  1.110  H13 2YC 30 
2YC H14 H14 H 0 1 N N N 4.239  44.069 -16.337 1.482  -0.780 -0.764 H14 2YC 31 
2YC H15 H15 H 0 1 N N N 1.789  43.300 -18.720 3.846  -0.545 -1.510 H15 2YC 32 
2YC H16 H16 H 0 1 N N N 4.055  44.289 -20.000 4.036  -0.728 1.512  H16 2YC 33 
2YC H17 H17 H 0 1 N N N 1.838  43.988 -21.056 4.417  -3.147 0.912  H17 2YC 34 
2YC H18 H18 H 0 1 N N N 1.221  45.428 -20.179 2.905  -2.520 0.213  H18 2YC 35 
2YC H19 H19 H 0 1 N N N 2.513  45.614 -21.412 4.350  -2.704 -0.811 H19 2YC 36 
2YC H20 H20 H 0 1 N N N 4.679  46.130 -18.761 6.391  -0.925 1.479  H20 2YC 37 
2YC H21 H21 H 0 1 N N N 3.257  46.940 -19.501 6.397  -1.642 -0.164 H21 2YC 38 
2YC H22 H22 H 0 1 N N N 2.782  46.811 -16.911 7.099  1.044  -0.089 H22 2YC 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
2YC C11 C10 SING N N 1  
2YC C10 C9  SING N N 2  
2YC C10 C7  SING N N 3  
2YC C9  C8  SING N N 4  
2YC O   C   DOUB N N 5  
2YC C7  C   SING N N 6  
2YC C7  N2  SING N N 7  
2YC O1  C6  DOUB N N 8  
2YC C   N   SING N N 9  
2YC C8  N2  DOUB N N 10 
2YC C6  O2  SING N N 11 
2YC C6  C5  SING N N 12 
2YC N   C1  SING N N 13 
2YC C2  C1  SING N N 14 
2YC C2  C3  SING N N 15 
2YC C4  C5  SING N N 16 
2YC C4  C3  SING N N 17 
2YC C5  N1  SING N N 18 
2YC O2  H1  SING N N 19 
2YC C5  H2  SING N N 20 
2YC N1  H3  SING N N 21 
2YC N1  H4  SING N N 22 
2YC C4  H6  SING N N 23 
2YC C4  H7  SING N N 24 
2YC C3  H8  SING N N 25 
2YC C3  H9  SING N N 26 
2YC C2  H10 SING N N 27 
2YC C2  H11 SING N N 28 
2YC C1  H12 SING N N 29 
2YC C1  H13 SING N N 30 
2YC N   H14 SING N N 31 
2YC C7  H15 SING N N 32 
2YC C10 H16 SING N N 33 
2YC C11 H17 SING N N 34 
2YC C11 H18 SING N N 35 
2YC C11 H19 SING N N 36 
2YC C9  H20 SING N N 37 
2YC C9  H21 SING N N 38 
2YC C8  H22 SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
2YC SMILES           ACDLabs              12.01 "O=C(NCCCCC(C(=O)O)N)C1N=CCC1C"                                                                                               
2YC InChI            InChI                1.03  "InChI=1S/C12H21N3O3/c1-8-5-7-14-10(8)11(16)15-6-3-2-4-9(13)12(17)18/h7-10H,2-6,13H2,1H3,(H,15,16)(H,17,18)/t8-,9-,10-/m0/s1" 
2YC InChIKey         InChI                1.03  ZFOMKMMPBOQKMC-GUBZILKMSA-N                                                                                                   
2YC SMILES_CANONICAL CACTVS               3.385 "C[C@H]1CC=N[C@@H]1C(=O)NCCCC[C@H](N)C(O)=O"                                                                                  
2YC SMILES           CACTVS               3.385 "C[CH]1CC=N[CH]1C(=O)NCCCC[CH](N)C(O)=O"                                                                                      
2YC SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H]1CC=N[C@@H]1C(=O)NCCCC[C@@H](C(=O)O)N"                                                                                 
2YC SMILES           "OpenEye OEToolkits" 1.7.6 "CC1CC=NC1C(=O)NCCCCC(C(=O)O)N"                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
2YC "SYSTEMATIC NAME" ACDLabs              12.01 "N~6~-{[(2S,3S)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine"                     
2YC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-2-azanyl-6-[[(2S,3S)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonylamino]hexanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
2YC "Create component"       2014-04-14 RCSB 
2YC "Initial release"        2014-04-23 RCSB 
2YC "Modify one letter code" 2014-04-22 RCSB 
# 
