data_3LC
# 
_chem_comp.id                                    3LC 
_chem_comp.name                                  "(3S,4S,7Z)-7-(2-amino-1,3-thiazol-4-yl)-3-ethenyl-4-formyl-1-[({3-(5-hydroxy-4-oxo-3,4-dihydropyridin-2-yl)-4-[3-(methylsulfonyl)propyl]-5-oxo-4,5-dihydro-1H-1,2,4-triazol-1-yl}sulfonyl)amino]-10,10-dimethyl-1,6-dioxo-9-oxa-2,5,8-triazaundec-7-en-11-oic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H32 N10 O13 S3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-09-12 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        788.786 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3LC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4WEK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3LC C1  C1  C 0 1 N N N N N N 6.887  41.548 15.082 8.269  -0.362 -2.105 C1  3LC 1  
3LC C2  C2  C 0 1 N N N N N N 6.088  41.024 13.900 9.336  -0.508 -1.017 C2  3LC 2  
3LC C3  C3  C 0 1 N N N N N N 7.913  42.627 14.646 8.467  -1.431 -3.149 C3  3LC 3  
3LC O4  O1  O 0 1 N N N N N N 5.719  35.153 16.258 1.935  -0.190 -1.809 O4  3LC 4  
3LC O5  O2  O 0 1 N N N N N N 2.866  37.429 16.255 -1.185 -1.867 2.117  O5  3LC 5  
3LC N6  N1  N 0 1 N N N N N N -0.403 37.315 17.218 -4.054 -2.256 1.131  N6  3LC 6  
3LC C7  C4  C 0 1 Y N N N N N 11.275 37.194 13.268 3.798  2.587  2.439  C7  3LC 7  
3LC C8  C5  C 0 1 N N N N N N 8.225  38.147 16.766 4.570  -0.650 -0.182 C8  3LC 8  
3LC C9  C6  C 0 1 N N S N N N 6.354  36.881 17.721 2.348  -1.631 0.009  C9  3LC 9  
3LC C10 C7  C 0 1 N N N N N N 5.930  35.483 17.408 1.641  -1.224 -1.259 C10 3LC 10 
3LC C11 C8  C 0 1 N N S N N N 5.115  37.785 17.932 1.327  -1.766 1.140  C11 3LC 11 
3LC C12 C9  C 0 1 N N N N N N 5.351  38.908 18.932 2.033  -2.173 2.408  C12 3LC 12 
3LC C13 C10 C 0 1 N N N N N N 5.547  38.434 20.344 1.715  -3.295 3.004  C13 3LC 13 
3LC C14 C11 C 0 1 N N N N N N 2.915  36.869 17.349 -0.895 -2.747 1.330  C14 3LC 14 
3LC C15 C12 C 0 1 N N N N N N -1.547 37.687 16.557 -4.006 -1.045 1.722  C15 3LC 15 
3LC C16 C13 C 0 1 N N N N N N -0.965 39.252 18.037 -5.229 -0.888 -0.118 C16 3LC 16 
3LC C19 C14 C 0 1 N N N N N N -1.289 42.988 18.753 -7.412 -0.524 -3.368 C19 3LC 17 
3LC C20 C15 C 0 1 N N N N N N -1.556 42.864 20.221 -7.668 0.855  -3.179 C20 3LC 18 
3LC C21 C16 C 0 1 N N N N N N -1.601 41.652 20.790 -7.156 1.505  -2.102 C21 3LC 19 
3LC C22 C17 C 0 1 N N N N N N -3.075 39.679 16.620 -4.935 1.233  1.248  C22 3LC 20 
3LC C24 C18 C 0 1 N N N N N N -4.700 38.482 18.121 -4.046 3.538  0.879  C24 3LC 21 
3LC O12 O3  O 0 1 N N N N N N -6.321 36.445 17.851 -1.495 4.185  0.717  O12 3LC 22 
3LC S2  S1  S 0 1 N N N N N N -6.326 37.795 18.348 -2.730 4.510  0.095  S2  3LC 23 
3LC O11 O4  O 0 1 N N N N N N -7.286 38.707 17.779 -2.852 4.383  -1.315 O11 3LC 24 
3LC C25 C19 C 0 1 N N N N N N -6.542 37.760 20.086 -3.184 6.203  0.563  C25 3LC 25 
3LC C23 C20 C 0 1 N N N N N N -4.396 38.919 16.705 -3.826 2.053  0.587  C23 3LC 26 
3LC N7  N2  N 0 1 N N N N N N -1.905 38.906 17.084 -4.724 -0.190 0.968  N7  3LC 27 
3LC O8  O5  O 0 1 N N N N N N -2.145 37.101 15.695 -3.420 -0.773 2.754  O8  3LC 28 
3LC C17 C21 C 0 1 N N N N N N -1.152 40.540 18.700 -6.063 -0.330 -1.181 C17 3LC 29 
3LC N9  N3  N 0 1 N N N N N N -1.407 40.514 20.063 -6.402 0.937  -1.169 N9  3LC 30 
3LC O10 O6  O 0 1 N N N N N N -1.746 43.997 20.927 -8.430 1.532  -4.080 O10 3LC 31 
3LC O9  O7  O 0 1 N N N N N N -1.246 44.119 18.217 -7.856 -1.132 -4.321 O9  3LC 32 
3LC C18 C22 C 0 1 N N N N N N -1.091 41.740 18.039 -6.547 -1.203 -2.321 C18 3LC 33 
3LC N8  N4  N 0 1 N N N N N N -0.014 38.276 18.182 -4.831 -2.133 -0.029 N8  3LC 34 
3LC S1  S2  S 0 1 N N N N N N 0.507  35.842 17.020 -3.320 -3.638 1.674  S1  3LC 35 
3LC O6  O8  O 0 1 N N N N N N 0.674  35.672 15.611 -3.134 -3.471 3.072  O6  3LC 36 
3LC O7  O9  O 0 1 N N N N N N -0.205 34.853 17.762 -4.043 -4.724 1.110  O7  3LC 37 
3LC N5  N5  N 0 1 N N N N N N 1.930  36.003 17.760 -1.807 -3.685 1.003  N5  3LC 38 
3LC N4  N6  N 0 1 N N N N N N 3.926  36.996 18.221 0.336  -2.786 0.785  N4  3LC 39 
3LC N3  N7  N 0 1 N N N N N N 7.119  37.420 16.601 3.338  -0.611 0.364  N3  3LC 40 
3LC O3  O10 O 0 1 N N N N N N 8.683  38.443 17.864 4.891  -1.581 -0.893 O3  3LC 41 
3LC C4  C23 C 0 1 N N N N N N 8.847  38.634 15.493 5.533  0.444  0.086  C4  3LC 42 
3LC N   N8  N 0 1 N N N N N N 8.490  39.777 15.035 6.685  0.462  -0.523 N   3LC 43 
3LC O2  O11 O 0 1 N N N N N N 7.476  40.404 15.826 6.972  -0.500 -1.522 O2  3LC 44 
3LC O1  O12 O 0 1 N N N N N N 7.514  43.433 13.784 7.587  -2.229 -3.371 O1  3LC 45 
3LC O   O13 O 0 1 N N N N N N 9.030  42.640 15.195 9.620  -1.497 -3.832 O   3LC 46 
3LC C   C24 C 0 1 N N N N N N 5.981  42.185 16.119 8.392  1.016  -2.757 C   3LC 47 
3LC C5  C25 C 0 1 Y N N N N N 9.828  37.730 14.864 5.187  1.516  1.044  C5  3LC 48 
3LC N1  N9  N 0 1 Y N N N N N 10.527 38.165 13.737 3.985  1.604  1.615  N1  3LC 49 
3LC N2  N10 N 0 1 N N N N N N 12.061 37.295 12.185 2.624  2.838  3.129  N2  3LC 50 
3LC S   S3  S 0 1 Y N N N N N 11.190 35.702 14.173 5.269  3.549  2.551  S   3LC 51 
3LC C6  C26 C 0 1 Y N N N N N 10.111 36.471 15.277 6.064  2.474  1.403  C6  3LC 52 
3LC H1  H1  H 0 1 N N N N N N 5.374  40.263 14.248 9.248  -1.490 -0.553 H1  3LC 53 
3LC H2  H2  H 0 1 N N N N N N 5.540  41.854 13.431 10.325 -0.403 -1.462 H2  3LC 54 
3LC H3  H3  H 0 1 N N N N N N 6.772  40.575 13.165 9.193  0.265  -0.262 H3  3LC 55 
3LC H4  H4  H 0 1 N N N N N N 6.964  36.888 18.637 2.849  -2.586 -0.145 H4  3LC 56 
3LC H5  H5  H 0 1 N N N N N N 5.811  34.765 18.205 0.873  -1.858 -1.676 H5  3LC 57 
3LC H6  H6  H 0 1 N N N N N N 4.939  38.276 16.964 0.826  -0.811 1.294  H6  3LC 58 
3LC H7  H7  H 0 1 N N N N N N 5.375  39.951 18.652 2.802  -1.539 2.825  H7  3LC 59 
3LC H9  H9  H 0 1 N N N N N N 5.722  39.149 21.134 0.946  -3.928 2.588  H9  3LC 60 
3LC H10 H10 H 0 1 N N N N N N 5.513  37.378 20.569 2.221  -3.586 3.913  H10 3LC 61 
3LC H12 H12 H 0 1 N N N N N N -1.795 41.574 21.849 -7.376 2.557  -1.998 H12 3LC 62 
3LC H13 H13 H 0 1 N N N N N N -2.907 39.964 15.571 -4.916 1.398  2.325  H13 3LC 63 
3LC H14 H14 H 0 1 N N N N N N -3.157 40.586 17.238 -5.902 1.542  0.850  H14 3LC 64 
3LC H15 H15 H 0 1 N N N N N N -3.962 37.720 18.412 -4.027 3.703  1.956  H15 3LC 65 
3LC H16 H16 H 0 1 N N N N N N -4.602 39.358 18.779 -5.012 3.848  0.481  H16 3LC 66 
3LC H17 H17 H 0 1 N N N N N N -5.814 37.067 20.533 -3.191 6.290  1.650  H17 3LC 67 
3LC H18 H18 H 0 1 N N N N N N -6.386 38.769 20.495 -2.459 6.902  0.147  H18 3LC 68 
3LC H19 H19 H 0 1 N N N N N N -7.562 37.423 20.322 -4.176 6.434  0.175  H19 3LC 69 
3LC H20 H20 H 0 1 N N N N N N -5.207 39.573 16.352 -2.859 1.743  0.985  H20 3LC 70 
3LC H21 H21 H 0 1 N N N N N N -4.337 38.028 16.062 -3.845 1.888  -0.491 H21 3LC 71 
3LC H22 H22 H 0 1 N N N N N N -1.676 44.747 20.348 -8.550 2.468  -3.869 H22 3LC 72 
3LC H23 H23 H 0 1 N N N N N N -0.093 41.796 17.579 -7.124 -2.025 -1.897 H23 3LC 73 
3LC H24 H24 H 0 1 N N N N N N -1.857 41.704 17.250 -5.674 -1.629 -2.815 H24 3LC 74 
3LC H25 H25 H 0 1 N N N N N N 2.107  35.439 18.567 -1.576 -4.387 0.375  H25 3LC 75 
3LC H26 H26 H 0 1 N N N N N N 3.861  36.531 19.104 0.567  -3.488 0.157  H26 3LC 76 
3LC H27 H27 H 0 1 N N N N N N 6.801  37.237 15.671 3.108  0.091  0.992  H27 3LC 77 
3LC H28 H28 H 0 1 N N N N N N 9.542  43.365 14.856 9.700  -2.200 -4.491 H28 3LC 78 
3LC H29 H29 H 0 1 N N N N N N 6.587  42.553 16.960 8.249  1.789  -2.003 H29 3LC 79 
3LC H30 H30 H 0 1 N N N N N N 5.437  43.025 15.664 9.381  1.121  -3.202 H30 3LC 80 
3LC H31 H31 H 0 1 N N N N N N 5.262  41.438 16.486 7.632  1.120  -3.532 H31 3LC 81 
3LC H32 H32 H 0 1 N N N N N N 11.984 38.215 11.801 1.859  2.254  3.013  H32 3LC 82 
3LC H33 H33 H 0 1 N N N N N N 13.011 37.121 12.445 2.568  3.599  3.729  H33 3LC 83 
3LC H34 H34 H 0 1 N N N N N N 9.716  36.013 16.172 7.080  2.568  1.049  H34 3LC 84 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3LC N2  C7  SING N N 1  
3LC C7  N1  DOUB Y N 2  
3LC C7  S   SING Y N 3  
3LC N1  C5  SING Y N 4  
3LC O1  C3  DOUB N N 5  
3LC C2  C1  SING N N 6  
3LC S   C6  SING Y N 7  
3LC C3  C1  SING N N 8  
3LC C3  O   SING N N 9  
3LC C5  C6  DOUB Y N 10 
3LC C5  C4  SING N N 11 
3LC N   C4  DOUB N Z 12 
3LC N   O2  SING N N 13 
3LC C1  O2  SING N N 14 
3LC C1  C   SING N N 15 
3LC C4  C8  SING N N 16 
3LC O6  S1  DOUB N N 17 
3LC O8  C15 DOUB N N 18 
3LC O5  C14 DOUB N N 19 
3LC O4  C10 DOUB N N 20 
3LC C15 N7  SING N N 21 
3LC C15 N6  SING N N 22 
3LC N3  C8  SING N N 23 
3LC N3  C9  SING N N 24 
3LC C22 C23 SING N N 25 
3LC C22 N7  SING N N 26 
3LC C23 C24 SING N N 27 
3LC C8  O3  DOUB N N 28 
3LC S1  N6  SING N N 29 
3LC S1  N5  SING N N 30 
3LC S1  O7  DOUB N N 31 
3LC N7  C16 SING N N 32 
3LC N6  N8  SING N N 33 
3LC C14 N5  SING N N 34 
3LC C14 N4  SING N N 35 
3LC C10 C9  SING N N 36 
3LC C9  C11 SING N N 37 
3LC O11 S2  DOUB N N 38 
3LC O12 S2  DOUB N N 39 
3LC C11 N4  SING N N 40 
3LC C11 C12 SING N N 41 
3LC C16 N8  DOUB N N 42 
3LC C16 C17 SING N N 43 
3LC C18 C17 SING N N 44 
3LC C18 C19 SING N N 45 
3LC C24 S2  SING N N 46 
3LC O9  C19 DOUB N N 47 
3LC S2  C25 SING N N 48 
3LC C17 N9  DOUB N N 49 
3LC C19 C20 SING N N 50 
3LC C12 C13 DOUB N N 51 
3LC N9  C21 SING N N 52 
3LC C20 C21 DOUB N N 53 
3LC C20 O10 SING N N 54 
3LC C2  H1  SING N N 55 
3LC C2  H2  SING N N 56 
3LC C2  H3  SING N N 57 
3LC C9  H4  SING N N 58 
3LC C10 H5  SING N N 59 
3LC C11 H6  SING N N 60 
3LC C12 H7  SING N N 61 
3LC C13 H9  SING N N 62 
3LC C13 H10 SING N N 63 
3LC C21 H12 SING N N 64 
3LC C22 H13 SING N N 65 
3LC C22 H14 SING N N 66 
3LC C24 H15 SING N N 67 
3LC C24 H16 SING N N 68 
3LC C25 H17 SING N N 69 
3LC C25 H18 SING N N 70 
3LC C25 H19 SING N N 71 
3LC C23 H20 SING N N 72 
3LC C23 H21 SING N N 73 
3LC O10 H22 SING N N 74 
3LC C18 H23 SING N N 75 
3LC C18 H24 SING N N 76 
3LC N5  H25 SING N N 77 
3LC N4  H26 SING N N 78 
3LC N3  H27 SING N N 79 
3LC O   H28 SING N N 80 
3LC C   H29 SING N N 81 
3LC C   H30 SING N N 82 
3LC C   H31 SING N N 83 
3LC N2  H32 SING N N 84 
3LC N2  H33 SING N N 85 
3LC C6  H34 SING N N 86 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3LC SMILES           ACDLabs              12.01 "O=S(=O)(C)CCCN2C(=O)N(N=C2C1=NC=C(O)C(=O)C1)S(=O)(=O)NC(=O)NC(\C=C)C(C=O)NC(=O)C(=N\OC(C(=O)O)(C)C)/c3nc(sc3)N"                                                                                                                                                                      
3LC InChI            InChI                1.03  "InChI=1S/C26H32N10O13S3/c1-5-13(15(11-37)29-21(40)19(16-12-50-23(27)30-16)33-49-26(2,3)22(41)42)31-24(43)34-52(47,48)36-25(44)35(7-6-8-51(4,45)46)20(32-36)14-9-17(38)18(39)10-28-14/h5,10-13,15,39H,1,6-9H2,2-4H3,(H2,27,30)(H,29,40)(H,41,42)(H2,31,34,43)/b33-19-/t13-,15+/m0/s1" 
3LC InChIKey         InChI                1.03  AHKKXUZADGDRIH-JNUWSLPISA-N                                                                                                                                                                                                                                                           
3LC SMILES_CANONICAL CACTVS               3.385 "CC(C)(O\N=C(/C(=O)N[C@H](C=O)[C@@H](NC(=O)N[S](=O)(=O)N1N=C(N(CCC[S](C)(=O)=O)C1=O)C2=NC=C(O)C(=O)C2)C=C)c3csc(N)n3)C(O)=O"                                                                                                                                                          
3LC SMILES           CACTVS               3.385 "CC(C)(ON=C(C(=O)N[CH](C=O)[CH](NC(=O)N[S](=O)(=O)N1N=C(N(CCC[S](C)(=O)=O)C1=O)C2=NC=C(O)C(=O)C2)C=C)c3csc(N)n3)C(O)=O"                                                                                                                                                               
3LC SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC(C)(C(=O)O)O/N=C(/c1csc(n1)N)\C(=O)N[C@H](C=O)[C@H](C=C)NC(=O)NS(=O)(=O)N2C(=O)N(C(=N2)C3=NC=C(C(=O)C3)O)CCCS(=O)(=O)C"                                                                                                                                                            
3LC SMILES           "OpenEye OEToolkits" 1.9.2 "CC(C)(C(=O)O)ON=C(c1csc(n1)N)C(=O)NC(C=O)C(C=C)NC(=O)NS(=O)(=O)N2C(=O)N(C(=N2)C3=NC=C(C(=O)C3)O)CCCS(=O)(=O)C"                                                                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3LC "SYSTEMATIC NAME" ACDLabs              12.01 "(3S,4S,7Z)-7-(2-amino-1,3-thiazol-4-yl)-3-ethenyl-4-formyl-1-[({3-(5-hydroxy-4-oxo-3,4-dihydropyridin-2-yl)-4-[3-(methylsulfonyl)propyl]-5-oxo-4,5-dihydro-1H-1,2,4-triazol-1-yl}sulfonyl)amino]-10,10-dimethyl-1,6-dioxo-9-oxa-2,5,8-triazaundec-7-en-11-oic acid"                            
3LC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-[(Z)-[1-(2-azanyl-1,3-thiazol-4-yl)-2-[[(2S,3S)-3-[[4-(3-methylsulfonylpropyl)-5-oxidanylidene-3-(5-oxidanyl-4-oxidanylidene-3H-pyridin-2-yl)-1,2,4-triazol-1-yl]sulfonylcarbamoylamino]-1-oxidanylidene-pent-4-en-2-yl]amino]-2-oxidanylidene-ethylidene]amino]oxy-2-methyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3LC "Create component" 2014-09-12 RCSB 
3LC "Initial release"  2015-04-22 RCSB 
3LC "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            3LC 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C10 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
