data_9JC
# 
_chem_comp.id                                    9JC 
_chem_comp.name                                  "4-(aminomethyl)-8-azanyl-quinoline-2-carbaldehyde" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C11 H11 N3 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-11-15 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        217.224 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9JC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7Q8U 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9JC C    C92  C 0 1 N N N N Y Y -4.768 19.591 27.249 3.034  0.186  -0.004 C    9JC 1  
9JC C93  C93  C 0 1 N N N N N N -5.811 14.592 27.883 -0.836 -2.930 0.422  C93  9JC 2  
9JC C94  C94  C 0 1 Y N N N N N -5.950 16.061 28.318 -0.275 -1.540 0.266  C94  9JC 3  
9JC C95  C95  C 0 1 Y N N N N N -5.318 17.091 27.586 1.072  -1.331 0.205  C95  9JC 4  
9JC CA   C96  C 0 1 Y N N N Y N -5.472 18.433 28.011 1.570  -0.027 0.060  CA   9JC 5  
9JC C97  C97  C 0 1 Y N N N N N -7.406 15.443 30.254 -2.522 -0.567 0.223  C97  9JC 6  
9JC C98  C98  C 0 1 Y N N N N N -6.731 16.427 29.470 -1.127 -0.423 0.174  C98  9JC 7  
9JC C99  C99  C 0 1 Y N N N Y N -6.828 17.754 29.816 -0.558 0.869  0.027  C99  9JC 8  
9JC N    N27  N 0 1 N N N Y Y N -7.655 19.601 31.228 -0.889 3.270  -0.210 N    9JC 9  
9JC N4   N4   N 0 1 Y N N N Y N -6.194 18.734 29.087 0.763  1.014  -0.021 N4   9JC 10 
9JC N5   N5   N 0 1 N N N N N N -5.303 14.537 26.522 -1.276 -3.430 -0.887 N5   9JC 11 
9JC O    O17  O 0 1 N N N N Y Y -4.451 19.471 26.108 3.789  -0.763 0.064  O    9JC 12 
9JC C100 C100 C 0 0 Y N N N Y N -7.577 18.151 30.961 -1.418 1.991  -0.065 C100 9JC 13 
9JC C101 C101 C 0 0 Y N N N N N -8.250 17.191 31.722 -2.782 1.805  -0.012 C101 9JC 14 
9JC C102 C102 C 0 0 Y N N N N N -8.159 15.832 31.370 -3.323 0.531  0.132  C102 9JC 15 
9JC H6   H2   H 0 1 N N N N N N -6.795 14.101 27.928 -0.066 -3.589 0.824  H6   9JC 16 
9JC H3   H3   H 0 1 N N N N N N -5.112 14.074 28.557 -1.685 -2.904 1.105  H3   9JC 17 
9JC H4   H4   H 0 1 N N N N N N -4.725 16.858 26.714 1.753  -2.167 0.269  H4   9JC 18 
9JC H5   H5   H 0 1 N N N N N N -7.336 14.399 29.987 -2.960 -1.548 0.334  H5   9JC 19 
9JC H    H6   H 0 1 N N N Y Y N -8.202 19.760 32.050 0.072  3.396  -0.247 H    9JC 20 
9JC H2   H7   H 0 1 N Y N Y Y N -6.734 19.965 31.365 -1.481 4.036  -0.273 H2   9JC 21 
9JC H8   H8   H 0 1 N N N N N N -5.212 13.583 26.238 -1.656 -4.362 -0.809 H8   9JC 22 
9JC H9   H9   H 0 1 N N N N N N -5.938 15.008 25.910 -1.942 -2.802 -1.309 H9   9JC 23 
9JC H11  H11  H 0 1 N N N N N N -8.838 17.491 32.577 -3.439 2.659  -0.083 H11  9JC 24 
9JC H12  H12  H 0 1 N N N N N N -8.671 15.087 31.961 -4.396 0.411  0.170  H12  9JC 25 
9JC OXT  OXT  O 0 1 N Y N N Y Y ?      ?      ?      3.528  1.431  -0.144 O1   9JC 26 
9JC HXT  HXT  H 0 1 N Y N N Y Y ?      ?      ?      4.490  1.520  -0.181 H1   9JC 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9JC O    C    DOUB N N 1  
9JC N5   C93  SING N N 2  
9JC C    CA   SING N N 3  
9JC C95  CA   DOUB Y N 4  
9JC C95  C94  SING Y N 5  
9JC C93  C94  SING N N 6  
9JC CA   N4   SING Y N 7  
9JC C94  C98  DOUB Y N 8  
9JC N4   C99  DOUB Y N 9  
9JC C98  C99  SING Y N 10 
9JC C98  C97  SING Y N 11 
9JC C99  C100 SING Y N 12 
9JC C97  C102 DOUB Y N 13 
9JC C100 N    SING N N 14 
9JC C100 C101 DOUB Y N 15 
9JC C102 C101 SING Y N 16 
9JC C93  H6   SING N N 17 
9JC C93  H3   SING N N 18 
9JC C95  H4   SING N N 19 
9JC C97  H5   SING N N 20 
9JC N    H    SING N N 21 
9JC N    H2   SING N N 22 
9JC N5   H8   SING N N 23 
9JC N5   H9   SING N N 24 
9JC C101 H11  SING N N 25 
9JC C102 H12  SING N N 26 
9JC C    OXT  SING N N 27 
9JC OXT  HXT  SING N N 28 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9JC InChI            InChI                1.06  "InChI=1S/C11H11N3O2/c12-5-6-4-9(11(15)16)14-10-7(6)2-1-3-8(10)13/h1-4H,5,12-13H2,(H,15,16)" 
9JC InChIKey         InChI                1.06  AMKRFCLMQBLGKF-UHFFFAOYSA-N                                                                  
9JC SMILES_CANONICAL CACTVS               3.385 "NCc1cc(nc2c(N)cccc12)C(O)=O"                                                                
9JC SMILES           CACTVS               3.385 "NCc1cc(nc2c(N)cccc12)C(O)=O"                                                                
9JC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc(nc2c(c1)N)C(=O)O)CN"                                                              
9JC SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc(nc2c(c1)N)C(=O)O)CN"                                                              
# 
_pdbx_chem_comp_identifier.comp_id           9JC 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "4-(aminomethyl)-8-azanyl-quinoline-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9JC "Create component"   2021-11-15 PDBE 
9JC "Modify descriptor"  2022-08-22 RCSB 
9JC "Initial release"    2023-09-27 RCSB 
9JC "Modify backbone"    2023-11-03 PDBE 
9JC "Other modification" 2024-06-28 PDBE 
9JC "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            9JC 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain and backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
