data_IXC
# 
_chem_comp.id                                    IXC 
_chem_comp.name                                  "3-hydroxy-N-{(3P)-3-[(4P)-2-(methylsulfanyl)-5-{2-[4-(piperazin-1-yl)anilino]pyridin-4-yl}-1H-imidazol-4-yl]phenyl}-2-[(1-oxo-1,3-dihydro-2H-isoindol-2-yl)methyl]benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C41 H38 N8 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-03 
_chem_comp.pdbx_modified_date                    2024-08-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        722.857 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IXC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8TO3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IXC C10 C1  C 0 1 Y N N N N N 27.287 -15.771 -14.980 -1.828  3.757  -0.052 C10 IXC 1  
IXC C13 C2  C 0 1 Y N N N N N 27.136 -17.134 -11.299 -3.294  0.488  -1.178 C13 IXC 2  
IXC C15 C3  C 0 1 Y N N N N N 28.612 -15.323 -11.360 -4.786  1.462  0.299  C15 IXC 3  
IXC C17 C4  C 0 1 Y N N N N N 30.465 -13.455 -11.122 -6.898  0.357  0.706  C17 IXC 4  
IXC C20 C5  C 0 1 Y N N N N N 32.369 -11.505 -11.825 -8.672  -1.702 0.174  C20 IXC 5  
IXC C22 C6  C 0 1 N N N N N N 34.738 -11.018 -12.580 -9.483  -3.162 -1.501 C22 IXC 6  
IXC C26 C7  C 0 1 N N N N N N 32.979 -9.455  -13.230 -9.340  -3.881 0.806  C26 IXC 7  
IXC C28 C8  C 0 1 Y N N N N N 31.412 -12.959 -10.194 -7.714  -0.134 1.716  C28 IXC 8  
IXC C02 C9  C 0 1 N N N N N N 21.705 -20.538 -16.267 4.691   0.605  -0.189 C02 IXC 9  
IXC C04 C10 C 0 1 Y N N N N N 23.190 -18.530 -15.542 2.424   1.320  -0.276 C04 IXC 10 
IXC C05 C11 C 0 1 Y N N N N N 22.327 -18.004 -14.568 1.907   0.172  0.313  C05 IXC 11 
IXC C06 C12 C 0 1 Y N N N N N 22.696 -16.836 -13.937 0.628   0.176  0.837  C06 IXC 12 
IXC C07 C13 C 0 1 Y N N N N N 23.893 -16.204 -14.268 -0.143  1.319  0.779  C07 IXC 13 
IXC C08 C14 C 0 1 Y N N N N N 24.740 -16.757 -15.228 0.367   2.476  0.190  C08 IXC 14 
IXC C09 C15 C 0 1 Y N N N N N 26.139 -16.105 -15.706 -0.459  3.704  0.126  C09 IXC 15 
IXC C11 C16 C 0 1 Y N N N N N 27.507 -15.982 -13.408 -2.744  2.613  -0.213 C11 IXC 16 
IXC C12 C17 C 0 1 Y N N N N N 26.870 -16.999 -12.671 -2.415  1.540  -1.058 C12 IXC 17 
IXC C18 C18 C 0 1 Y N N N N N 30.485 -12.963 -12.400 -6.975  -0.181 -0.572 C18 IXC 18 
IXC C19 C19 C 0 1 Y N N N N N 31.447 -11.981 -12.765 -7.859  -1.207 -0.837 C19 IXC 19 
IXC C23 C20 C 0 1 N N N N N N 35.617 -10.091 -13.434 -10.531 -4.243 -1.773 C23 IXC 20 
IXC C25 C21 C 0 1 N N N N N N 33.985 -8.297  -13.298 -10.388 -4.962 0.534  C25 IXC 21 
IXC C27 C22 C 0 1 Y N N N N N 32.364 -11.989 -10.547 -8.599  -1.161 1.451  C27 IXC 22 
IXC C29 C23 C 0 1 Y N N N N N 28.386 -15.150 -12.738 -3.957  2.559  0.482  C29 IXC 23 
IXC C31 C24 C 0 1 Y N N N N N 27.633 -15.239 -17.081 -1.019  5.804  0.133  C31 IXC 24 
IXC C33 C25 C 0 1 N N N N N N 28.796 -16.322 -19.398 0.884   7.745  0.449  C33 IXC 25 
IXC C35 C26 C 0 1 Y N N N N N 24.364 -17.921 -15.843 1.657   2.473  -0.339 C35 IXC 26 
IXC C36 C27 C 0 1 Y N N N N N 21.815 -21.821 -17.048 6.082   0.676  -0.684 C36 IXC 27 
IXC C37 C28 C 0 1 Y N N N N N 21.679 -21.790 -18.446 7.106   0.029  0.008  C37 IXC 28 
IXC C38 C29 C 0 1 N N N N N N 21.380 -20.447 -19.182 6.798   -0.742 1.266  C38 IXC 29 
IXC C40 C30 C 0 1 N N N N N N 19.760 -19.760 -21.040 7.303   -3.148 0.815  C40 IXC 30 
IXC C41 C31 C 0 1 Y N N N N N 18.261 -19.993 -21.367 6.583   -4.383 0.451  C41 IXC 31 
IXC C42 C32 C 0 1 Y N N N N N 17.459 -19.558 -22.431 7.015   -5.692 0.226  C42 IXC 32 
IXC C43 C33 C 0 1 Y N N N N N 16.097 -19.913 -22.502 6.099   -6.668 -0.109 C43 IXC 33 
IXC C44 C34 C 0 1 Y N N N N N 15.544 -20.703 -21.493 4.756   -6.356 -0.223 C44 IXC 34 
IXC C45 C35 C 0 1 Y N N N N N 16.343 -21.146 -20.419 4.320   -5.060 -0.003 C45 IXC 35 
IXC C46 C36 C 0 1 Y N N N N N 17.714 -20.784 -20.360 5.225   -4.080 0.333  C46 IXC 36 
IXC C47 C37 C 0 1 N N N N N N 18.830 -21.081 -19.344 5.089   -2.608 0.632  C47 IXC 37 
IXC C49 C38 C 0 1 Y N N N N N 21.818 -22.981 -19.121 8.406   0.095  -0.465 C49 IXC 38 
IXC C51 C39 C 0 1 Y N N N N N 22.092 -24.112 -18.428 8.688   0.805  -1.624 C51 IXC 39 
IXC C52 C40 C 0 1 Y N N N N N 22.236 -24.126 -17.019 7.674   1.448  -2.311 C52 IXC 40 
IXC C53 C41 C 0 1 Y N N N N N 22.099 -22.948 -16.340 6.376   1.388  -1.849 C53 IXC 41 
IXC N03 N1  N 0 1 N N N N N N 22.954 -19.788 -16.258 3.721   1.314  -0.800 N03 IXC 42 
IXC N14 N2  N 0 1 Y N N N N N 27.980 -16.297 -10.699 -4.436  0.475  -0.513 N14 IXC 43 
IXC N16 N3  N 0 1 N N N N N N 29.521 -14.458 -10.617 -6.000  1.398  0.975  N16 IXC 44 
IXC N21 N4  N 0 1 N N N N N N 33.376 -10.492 -12.216 -9.569  -2.742 -0.095 N21 IXC 45 
IXC N24 N5  N 0 1 N N N N N N 35.351 -8.687  -13.275 -10.302 -5.381 -0.872 N24 IXC 46 
IXC N30 N6  N 0 1 Y N N N N N 28.189 -15.254 -15.852 -2.170  5.098  -0.041 N30 IXC 47 
IXC N34 N7  N 0 1 Y N N N N N 26.369 -15.792 -16.965 -0.010  4.969  0.231  N34 IXC 48 
IXC N39 N8  N 0 1 N N N N N N 20.050 -20.447 -19.815 6.443   -2.120 0.920  N39 IXC 49 
IXC O01 O1  O 0 1 N N N N N N 20.706 -20.207 -15.683 4.422   -0.094 0.769  O01 IXC 50 
IXC O48 O2  O 0 1 N N N N N N 20.568 -19.141 -21.647 8.503   -3.071 0.998  O48 IXC 51 
IXC O50 O3  O 0 1 N N N N N N 21.683 -23.020 -20.486 9.406   -0.534 0.207  O50 IXC 52 
IXC S32 S1  S 0 1 N N N N N N 28.319 -14.708 -18.688 -0.901  7.560  0.213  S32 IXC 53 
IXC H1  H1  H 0 1 N N N N N N 26.656 -17.917 -10.730 -3.049  -0.338 -1.829 H1  IXC 54 
IXC H2  H2  H 0 1 N N N N N N 34.598 -11.955 -13.138 -8.488  -3.561 -1.701 H2  IXC 55 
IXC H3  H3  H 0 1 N N N N N N 35.279 -11.225 -11.645 -9.667  -2.304 -2.148 H3  IXC 56 
IXC H4  H4  H 0 1 N N N N N N 31.993 -9.052  -12.957 -9.421  -3.548 1.841  H4  IXC 57 
IXC H5  H5  H 0 1 N N N N N N 32.920 -9.931  -14.220 -8.344  -4.288 0.632  H5  IXC 58 
IXC H6  H6  H 0 1 N N N N N N 31.402 -13.338 -9.183  -7.658  0.286  2.709  H6  IXC 59 
IXC H7  H7  H 0 1 N N N N N N 21.400 -18.500 -14.320 2.506   -0.725 0.362  H7  IXC 60 
IXC H8  H8  H 0 1 N N N N N N 22.054 -16.408 -13.182 0.231   -0.719 1.293  H8  IXC 61 
IXC H9  H9  H 0 1 N N N N N N 24.166 -15.281 -13.778 -1.142  1.318  1.189  H9  IXC 62 
IXC H10 H10 H 0 1 N N N N N N 26.180 -17.672 -13.159 -1.484  1.540  -1.605 H10 IXC 63 
IXC H11 H11 H 0 1 N N N N N N 29.772 -13.320 -13.129 -6.342  0.205  -1.359 H11 IXC 64 
IXC H12 H12 H 0 1 N N N N N N 31.466 -11.600 -13.775 -7.919  -1.625 -1.832 H12 IXC 65 
IXC H13 H13 H 0 1 N N N N N N 35.460 -10.351 -14.491 -11.527 -3.836 -1.599 H13 IXC 66 
IXC H14 H14 H 0 1 N N N N N N 36.668 -10.272 -13.164 -10.449 -4.576 -2.808 H14 IXC 67 
IXC H15 H15 H 0 1 N N N N N N 33.804 -7.637  -12.437 -10.203 -5.819 1.181  H15 IXC 68 
IXC H16 H16 H 0 1 N N N N N N 33.804 -7.742  -14.230 -11.383 -4.563 0.734  H16 IXC 69 
IXC H17 H17 H 0 1 N N N N N N 33.080 -11.632 -9.821  -9.231  -1.546 2.238  H17 IXC 70 
IXC H18 H18 H 0 1 N N N N N N 28.900 -14.366 -13.274 -4.242  3.358  1.150  H18 IXC 71 
IXC H19 H19 H 0 1 N N N N N N 29.238 -16.169 -20.394 1.183   7.238  1.367  H19 IXC 72 
IXC H20 H20 H 0 1 N N N N N N 29.532 -16.808 -18.741 1.410   7.304  -0.397 H20 IXC 73 
IXC H21 H21 H 0 1 N N N N N N 27.905 -16.961 -19.486 1.133   8.803  0.521  H21 IXC 74 
IXC H22 H22 H 0 1 N N N N N N 25.015 -18.363 -16.583 2.057   3.366  -0.796 H22 IXC 75 
IXC H23 H23 H 0 1 N N N N N N 22.143 -20.291 -19.959 7.675   -0.744 1.914  H23 IXC 76 
IXC H24 H24 H 0 1 N N N N N N 21.426 -19.625 -18.453 5.964   -0.271 1.786  H24 IXC 77 
IXC H25 H25 H 0 1 N N N N N N 17.890 -18.943 -23.207 8.062   -5.939 0.314  H25 IXC 78 
IXC H26 H26 H 0 1 N N N N N N 15.488 -19.577 -23.328 6.433   -7.680 -0.283 H26 IXC 79 
IXC H27 H27 H 0 1 N N N N N N 14.500 -20.976 -21.535 4.045   -7.126 -0.486 H27 IXC 80 
IXC H28 H28 H 0 1 N N N N N N 15.912 -21.760 -19.642 3.272   -4.820 -0.093 H28 IXC 81 
IXC H29 H29 H 0 1 N N N N N N 18.555 -20.675 -18.359 4.680   -2.086 -0.233 H29 IXC 82 
IXC H30 H30 H 0 1 N N N N N N 18.982 -22.168 -19.264 4.445   -2.459 1.498  H30 IXC 83 
IXC H31 H31 H 0 1 N N N N N N 22.205 -25.039 -18.971 9.702   0.856  -1.990 H31 IXC 84 
IXC H32 H32 H 0 1 N N N N N N 22.449 -25.045 -16.494 7.900   1.998  -3.212 H32 IXC 85 
IXC H33 H33 H 0 1 N N N N N N 22.213 -22.912 -15.267 5.586   1.887  -2.390 H33 IXC 86 
IXC H34 H34 H 0 1 N N N N N N 23.716 -20.163 -16.786 3.923   1.820  -1.602 H34 IXC 87 
IXC H35 H35 H 0 1 N N N N N N 29.498 -14.563 -9.623  -6.226  2.074  1.633  H35 IXC 88 
IXC H36 H36 H 0 1 N N N N N N 35.734 -8.402  -12.396 -10.948 -6.131 -1.066 H36 IXC 89 
IXC H38 H38 H 0 1 N N N N N N 29.110 -14.938 -15.623 -3.061  5.466  -0.143 H38 IXC 90 
IXC H40 H40 H 0 1 N N N N N N 21.808 -23.911 -20.792 9.559   -1.445 -0.078 H40 IXC 91 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IXC C43 C42 DOUB Y N 1  
IXC C43 C44 SING Y N 2  
IXC C42 C41 SING Y N 3  
IXC O48 C40 DOUB N N 4  
IXC C44 C45 DOUB Y N 5  
IXC C41 C40 SING N N 6  
IXC C41 C46 DOUB Y N 7  
IXC C40 N39 SING N N 8  
IXC O50 C49 SING N N 9  
IXC C45 C46 SING Y N 10 
IXC C46 C47 SING N N 11 
IXC N39 C47 SING N N 12 
IXC N39 C38 SING N N 13 
IXC C33 S32 SING N N 14 
IXC C38 C37 SING N N 15 
IXC C49 C37 DOUB Y N 16 
IXC C49 C51 SING Y N 17 
IXC S32 C31 SING N N 18 
IXC C37 C36 SING Y N 19 
IXC C51 C52 DOUB Y N 20 
IXC C31 N34 DOUB Y N 21 
IXC C31 N30 SING Y N 22 
IXC C36 C53 DOUB Y N 23 
IXC C36 C02 SING N N 24 
IXC C52 C53 SING Y N 25 
IXC N34 C09 SING Y N 26 
IXC C02 N03 SING N N 27 
IXC C02 O01 DOUB N N 28 
IXC N03 C04 SING N N 29 
IXC N30 C10 SING Y N 30 
IXC C35 C04 DOUB Y N 31 
IXC C35 C08 SING Y N 32 
IXC C09 C08 SING N N 33 
IXC C09 C10 DOUB Y N 34 
IXC C04 C05 SING Y N 35 
IXC C08 C07 DOUB Y N 36 
IXC C10 C11 SING N N 37 
IXC C05 C06 DOUB Y N 38 
IXC C07 C06 SING Y N 39 
IXC C23 N24 SING N N 40 
IXC C23 C22 SING N N 41 
IXC C11 C29 DOUB Y N 42 
IXC C11 C12 SING Y N 43 
IXC C25 N24 SING N N 44 
IXC C25 C26 SING N N 45 
IXC C26 N21 SING N N 46 
IXC C19 C18 DOUB Y N 47 
IXC C19 C20 SING Y N 48 
IXC C29 C15 SING Y N 49 
IXC C12 C13 DOUB Y N 50 
IXC C22 N21 SING N N 51 
IXC C18 C17 SING Y N 52 
IXC N21 C20 SING N N 53 
IXC C20 C27 DOUB Y N 54 
IXC C15 N14 DOUB Y N 55 
IXC C15 N16 SING N N 56 
IXC C13 N14 SING Y N 57 
IXC C17 N16 SING N N 58 
IXC C17 C28 DOUB Y N 59 
IXC C27 C28 SING Y N 60 
IXC C13 H1  SING N N 61 
IXC C22 H2  SING N N 62 
IXC C22 H3  SING N N 63 
IXC C26 H4  SING N N 64 
IXC C26 H5  SING N N 65 
IXC C28 H6  SING N N 66 
IXC C05 H7  SING N N 67 
IXC C06 H8  SING N N 68 
IXC C07 H9  SING N N 69 
IXC C12 H10 SING N N 70 
IXC C18 H11 SING N N 71 
IXC C19 H12 SING N N 72 
IXC C23 H13 SING N N 73 
IXC C23 H14 SING N N 74 
IXC C25 H15 SING N N 75 
IXC C25 H16 SING N N 76 
IXC C27 H17 SING N N 77 
IXC C29 H18 SING N N 78 
IXC C33 H19 SING N N 79 
IXC C33 H20 SING N N 80 
IXC C33 H21 SING N N 81 
IXC C35 H22 SING N N 82 
IXC C38 H23 SING N N 83 
IXC C38 H24 SING N N 84 
IXC C42 H25 SING N N 85 
IXC C43 H26 SING N N 86 
IXC C44 H27 SING N N 87 
IXC C45 H28 SING N N 88 
IXC C47 H29 SING N N 89 
IXC C47 H30 SING N N 90 
IXC C51 H31 SING N N 91 
IXC C52 H32 SING N N 92 
IXC C53 H33 SING N N 93 
IXC N03 H34 SING N N 94 
IXC N16 H35 SING N N 95 
IXC N24 H36 SING N N 96 
IXC N30 H38 SING N N 97 
IXC O50 H40 SING N N 98 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IXC SMILES           ACDLabs              12.01 "CSc1[NH]c(c2ccnc(Nc3ccc(cc3)N3CCNCC3)c2)c(n1)c1cc(ccc1)NC(=O)c1cccc(O)c1CN1Cc2ccccc2C1=O"                                                                                                                                                                             
IXC InChI            InChI                1.06  "InChI=1S/C41H38N8O3S/c1-53-41-46-37(38(47-41)27-16-17-43-36(23-27)44-29-12-14-31(15-13-29)48-20-18-42-19-21-48)26-7-4-8-30(22-26)45-39(51)33-10-5-11-35(50)34(33)25-49-24-28-6-2-3-9-32(28)40(49)52/h2-17,22-23,42,50H,18-21,24-25H2,1H3,(H,43,44)(H,45,51)(H,46,47)" 
IXC InChIKey         InChI                1.06  DBLFPZMZQSDENE-UHFFFAOYSA-N                                                                                                                                                                                                                                            
IXC SMILES_CANONICAL CACTVS               3.385 "CSc1[nH]c(c2ccnc(Nc3ccc(cc3)N4CCNCC4)c2)c(n1)c5cccc(NC(=O)c6cccc(O)c6CN7Cc8ccccc8C7=O)c5"                                                                                                                                                                             
IXC SMILES           CACTVS               3.385 "CSc1[nH]c(c2ccnc(Nc3ccc(cc3)N4CCNCC4)c2)c(n1)c5cccc(NC(=O)c6cccc(O)c6CN7Cc8ccccc8C7=O)c5"                                                                                                                                                                             
IXC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CSc1[nH]c(c(n1)c2cccc(c2)NC(=O)c3cccc(c3CN4Cc5ccccc5C4=O)O)c6ccnc(c6)Nc7ccc(cc7)N8CCNCC8"                                                                                                                                                                             
IXC SMILES           "OpenEye OEToolkits" 2.0.7 "CSc1[nH]c(c(n1)c2cccc(c2)NC(=O)c3cccc(c3CN4Cc5ccccc5C4=O)O)c6ccnc(c6)Nc7ccc(cc7)N8CCNCC8"                                                                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
IXC "SYSTEMATIC NAME" ACDLabs              12.01 "3-hydroxy-N-{(3P)-3-[(4P)-2-(methylsulfanyl)-5-{2-[4-(piperazin-1-yl)anilino]pyridin-4-yl}-1H-imidazol-4-yl]phenyl}-2-[(1-oxo-1,3-dihydro-2H-isoindol-2-yl)methyl]benzamide" 
IXC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[3-[2-methylsulfanyl-5-[2-[(4-piperazin-1-ylphenyl)amino]pyridin-4-yl]-1~{H}-imidazol-4-yl]phenyl]-3-oxidanyl-2-[(3-oxidanylidene-1~{H}-isoindol-2-yl)methyl]benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IXC "Create component" 2023-08-03 RCSB 
IXC "Initial release"  2024-08-28 RCSB 
# 
