data_WLC
# 
_chem_comp.id                                    WLC 
_chem_comp.name                                  "(1S)-1-[(2R,3S)-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-7-methoxy-2,3-dihydro-1-benzofuran-5-yl]propane-1,3-diol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H26 O8" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-10-06 
_chem_comp.pdbx_modified_date                    2025-02-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        406.426 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     WLC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
WLC C1    C1     C 0 1 Y N N N N N 62.788 -2.865 10.513 -2.386 0.579  -0.398 C1    WLC 1  
WLC C2    C2     C 0 1 Y N N N N N 63.547 -3.899 11.087 -3.677 1.014  -0.165 C2    WLC 2  
WLC C3    C3     C 0 1 Y N N N N N 62.876 -4.972 11.675 -4.587 0.182  0.470  C3    WLC 3  
WLC O3    O3     O 0 1 N N N N N N 63.488 -6.007 12.299 -5.858 0.610  0.698  O3    WLC 4  
WLC C4    C4     C 0 1 Y N N N N N 61.479 -5.073 11.551 -4.199 -1.091 0.872  C4    WLC 5  
WLC O4    O4     O 0 1 N N N N N N 60.770 -5.916 12.383 -5.089 -1.910 1.495  O4    WLC 6  
WLC C5    C5     C 0 1 Y N N N N N 60.809 -4.203 10.678 -2.900 -1.524 0.636  C5    WLC 7  
WLC O5    O5     O 0 1 N N N N N N 59.623 -4.615 10.177 -2.515 -2.768 1.028  O5    WLC 8  
WLC C6    C6     C 0 1 Y N N N N N 61.470 -3.095 10.139 -1.998 -0.688 -0.004 C6    WLC 9  
WLC C7    C7     C 0 1 N N R N N N 63.048 -1.554 11.211 -1.400 1.487  -1.087 C7    WLC 10 
WLC C8    C8     C 0 1 N N S N N N 62.267 -0.233 10.986 -0.381 2.060  -0.074 C8    WLC 11 
WLC C9    C9     C 0 1 N N N N N N 62.415 0.524  9.672  0.083  3.456  -0.495 C9    WLC 12 
WLC O9    O9     O 0 1 N N N N N N 61.520 0.039  8.680  0.930  4.002  0.517  O9    WLC 13 
WLC "C0'" "C0'"  C 0 1 N N N N N N 61.324 0.019  15.591 2.239  -2.446 -3.053 "C0'" WLC 14 
WLC C10   C10    C 0 1 N N N N N N 64.805 -6.338 11.909 -6.186 1.929  0.257  C10   WLC 15 
WLC C11   C11    C 0 1 N N N N N N 59.685 -4.782 8.756  -1.165 -3.146 0.753  C11   WLC 16 
WLC "C2'" "C2'"  C 0 1 Y N N N N N 63.961 1.109  14.683 2.541  -0.939 -0.833 "C2'" WLC 17 
WLC "C3'" "C3'"  C 0 1 Y N N N N N 63.362 -0.116 14.470 1.456  -0.689 -1.654 "C3'" WLC 18 
WLC "O3'" "O3'"  O 0 1 N N N N N N 62.639 -0.563 15.531 1.273  -1.428 -2.781 "O3'" WLC 19 
WLC "C6'" "C6'"  C 0 1 Y N N N N N 63.280 1.798  12.430 1.839  0.809  0.642  "C6'" WLC 20 
WLC "C8'" "C8'"  C 0 1 N N N N N N 64.108 3.889  15.475 5.140  0.295  0.677  "C8'" WLC 21 
WLC "C9'" "C9'"  C 0 1 N N N N N N 62.647 3.650  15.867 6.309  0.118  1.648  "C9'" WLC 22 
WLC "O9'" "O9'"  O 0 1 N N N N N N 62.615 2.885  17.084 7.448  0.829  1.157  "O9'" WLC 23 
WLC CP1   CP1    C 0 1 Y N N N N N 63.890 2.076  13.684 2.736  -0.192 0.313  CP1   WLC 24 
WLC CP4   CP4    C 0 1 Y N N N N N 62.935 -0.454 13.170 0.549  0.322  -1.329 CP4   WLC 25 
WLC OP4   OP4    O 0 1 N N N N N N 62.783 -1.728 12.656 -0.566 0.741  -1.990 OP4   WLC 26 
WLC CP5   CP5    C 0 1 Y N N N N N 62.828 0.505  12.181 0.754  1.059  -0.171 CP5   WLC 27 
WLC CP7   CP7    C 0 1 N N S N N N 64.423 3.448  14.038 3.921  -0.466 1.202  CP7   WLC 28 
WLC OP7   OP7    O 0 1 N N N N N N 63.792 4.452  13.254 4.200  -1.868 1.206  OP7   WLC 29 
WLC H2    H2     H 0 1 N N N N N N 64.626 -3.864 11.073 -3.978 2.003  -0.478 H2    WLC 30 
WLC H6    H6     H 0 1 N N N N N N 60.968 -2.434 9.448  -0.988 -1.023 -0.187 H6    WLC 31 
WLC H7    H7     H 0 1 N N N N N N 64.116 -1.321 11.090 -1.918 2.289  -1.613 H7    WLC 32 
WLC H8    H8     H 0 1 N N N N N N 61.199 -0.429 11.160 -0.800 2.078  0.932  H8    WLC 33 
WLC H101  H10    H 0 0 N N N N N N 65.465 -5.475 12.078 -7.227 2.145  0.499  H101  WLC 34 
WLC H103  H10A   H 0 0 N N N N N N 65.160 -7.193 12.503 -5.540 2.651  0.756  H103  WLC 35 
WLC H102  H10B   H 0 0 N N N N N N 64.815 -6.604 10.842 -6.043 1.998  -0.822 H102  WLC 36 
WLC H111  H11    H 0 0 N N N N N N 60.449 -5.534 8.508  -0.990 -4.159 1.116  H111  WLC 37 
WLC H113  H11A   H 0 0 N N N N N N 58.706 -5.117 8.383  -0.989 -3.111 -0.322 H113  WLC 38 
WLC H112  H11B   H 0 0 N N N N N N 59.948 -3.823 8.285  -0.485 -2.458 1.255  H112  WLC 39 
WLC "H2'" "H2'"  H 0 1 N N N N N N 64.476 1.314  15.610 3.240  -1.723 -1.089 "H2'" WLC 40 
WLC "H6'" "H6'"  H 0 1 N N N N N N 63.170 2.573  11.686 1.988  1.395  1.537  "H6'" WLC 41 
WLC "H7'" HOP7   H 0 1 N N N N N N 63.930 4.268  12.332 4.408  -2.229 0.333  "H7'" WLC 42 
WLC "H8'" "H8'"  H 0 1 N N N N N N 64.753 3.324  16.164 4.897  1.354  0.591  "H8'" WLC 43 
WLC H91   H9     H 0 1 N N N N N N 62.207 1.589  9.849  0.634  3.388  -1.433 H91   WLC 44 
WLC H92   H9A    H 0 1 N N N N N N 63.447 0.408  9.308  -0.785 4.102  -0.630 H92   WLC 45 
WLC HO9   HO9    H 0 1 N N N N N N 61.639 0.532  7.877  1.262  4.888  0.317  HO9   WLC 46 
WLC HP1   "H9'"  H 0 1 N N N N N N 62.135 3.095  15.067 6.031  0.508  2.627  HP1   WLC 47 
WLC H1P1  "H0'"  H 0 0 N N N N N N 60.787 -0.377 16.465 3.224  -1.992 -3.158 H1P1  WLC 48 
WLC HP2   "H9'A" H 0 1 N N N N N N 62.143 4.615  16.023 6.552  -0.942 1.734  HP2   WLC 49 
WLC H1P3  "H0'A" H 0 0 N N N N N N 60.770 -0.233 14.675 2.253  -3.162 -2.232 H1P3  WLC 50 
WLC H1P2  "H0'B" H 0 0 N N N N N N 61.411 1.112  15.678 1.975  -2.959 -3.978 H1P2  WLC 51 
WLC HP7   HP7    H 0 1 N N N N N N 65.513 3.466  13.887 3.697  -0.138 2.218  HP7   WLC 52 
WLC HP9   "HO9'" H 0 1 N N N N N N 61.713 2.730  17.338 8.228  0.760  1.723  HP9   WLC 53 
WLC HO4   HO4    H 0 1 N N N N N N 59.845 -5.867 12.170 -5.596 -2.471 0.892  HO4   WLC 54 
WLC H8P   "H8'A" H 0 1 N N N N N N 64.325 4.963  15.567 5.418  -0.095 -0.302 H8P   WLC 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
WLC C6    C1    DOUB Y N 1  
WLC C1    C2    SING Y N 2  
WLC C1    C7    SING N N 3  
WLC C2    H2    SING N N 4  
WLC C2    C3    DOUB Y N 5  
WLC C4    C3    SING Y N 6  
WLC C3    O3    SING N N 7  
WLC C10   O3    SING N N 8  
WLC C5    C4    DOUB Y N 9  
WLC C4    O4    SING N N 10 
WLC O4    HO4   SING N N 11 
WLC C6    C5    SING Y N 12 
WLC O5    C5    SING N N 13 
WLC C11   O5    SING N N 14 
WLC H6    C6    SING N N 15 
WLC C8    C7    SING N N 16 
WLC H7    C7    SING N N 17 
WLC C7    OP4   SING N N 18 
WLC C9    C8    SING N N 19 
WLC C8    H8    SING N N 20 
WLC C8    CP5   SING N N 21 
WLC O9    C9    SING N N 22 
WLC H91   C9    SING N N 23 
WLC C9    H92   SING N N 24 
WLC HO9   O9    SING N N 25 
WLC H1P1  "C0'" SING N N 26 
WLC H1P2  "C0'" SING N N 27 
WLC "O3'" "C0'" SING N N 28 
WLC "C0'" H1P3  SING N N 29 
WLC H103  C10   SING N N 30 
WLC C10   H102  SING N N 31 
WLC C10   H101  SING N N 32 
WLC H113  C11   SING N N 33 
WLC H112  C11   SING N N 34 
WLC H111  C11   SING N N 35 
WLC CP1   "C2'" DOUB Y N 36 
WLC "C3'" "C2'" SING Y N 37 
WLC "C2'" "H2'" SING N N 38 
WLC CP4   "C3'" DOUB Y N 39 
WLC "C3'" "O3'" SING N N 40 
WLC "H6'" "C6'" SING N N 41 
WLC CP5   "C6'" DOUB Y N 42 
WLC "C6'" CP1   SING Y N 43 
WLC CP7   "C8'" SING N N 44 
WLC "C8'" "C9'" SING N N 45 
WLC "C8'" "H8'" SING N N 46 
WLC "C8'" H8P   SING N N 47 
WLC HP2   "C9'" SING N N 48 
WLC "C9'" HP1   SING N N 49 
WLC "C9'" "O9'" SING N N 50 
WLC "O9'" HP9   SING N N 51 
WLC CP1   CP7   SING N N 52 
WLC CP5   CP4   SING Y N 53 
WLC OP4   CP4   SING N N 54 
WLC OP7   CP7   SING N N 55 
WLC HP7   CP7   SING N N 56 
WLC OP7   "H7'" SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
WLC SMILES           ACDLabs              12.01 "OCCC(O)c1cc2c(OC(C2CO)c2cc(OC)c(O)c(OC)c2)c(c1)OC"                                                                                                                
WLC InChI            InChI                1.06  "InChI=1S/C21H26O8/c1-26-16-8-12(9-17(27-2)19(16)25)20-14(10-23)13-6-11(15(24)4-5-22)7-18(28-3)21(13)29-20/h6-9,14-15,20,22-25H,4-5,10H2,1-3H3/t14-,15+,20+/m1/s1" 
WLC InChIKey         InChI                1.06  RUDPHTXEXRMBNX-SIFCLUCFSA-N                                                                                                                                        
WLC SMILES_CANONICAL CACTVS               3.385 "COc1cc(cc(OC)c1O)[C@@H]2Oc3c(OC)cc(cc3[C@H]2CO)[C@@H](O)CCO"                                                                                                      
WLC SMILES           CACTVS               3.385 "COc1cc(cc(OC)c1O)[CH]2Oc3c(OC)cc(cc3[CH]2CO)[CH](O)CCO"                                                                                                           
WLC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc(cc(c1O)OC)[C@H]2[C@@H](c3cc(cc(c3O2)OC)[C@H](CCO)O)CO"                                                                                                     
WLC SMILES           "OpenEye OEToolkits" 2.0.7 "COc1cc(cc(c1O)OC)C2C(c3cc(cc(c3O2)OC)C(CCO)O)CO"                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
WLC "SYSTEMATIC NAME" ACDLabs              12.01 "(1S)-1-[(2R,3S)-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-7-methoxy-2,3-dihydro-1-benzofuran-5-yl]propane-1,3-diol"            
WLC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{S})-1-[(2~{R},3~{S})-2-(3,5-dimethoxy-4-oxidanyl-phenyl)-3-(hydroxymethyl)-7-methoxy-2,3-dihydro-1-benzofuran-5-yl]propane-1,3-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
WLC "Create component"   2023-10-06 RCSB 
WLC "Other modification" 2023-12-06 RCSB 
WLC "Initial release"    2025-02-24 RCSB 
# 
