data_0WD
# 
_chem_comp.id                                    0WD 
_chem_comp.name                                  
"[[(2R,3S,4R,5R)-5-(3-aminocarbonyl-4H-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H30 N7 O17 P3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-07-23 
_chem_comp.pdbx_modified_date                    2012-09-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        745.421 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0WD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4FS3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0WD O7N   O7N   O 0 1 N N N 107.556 65.235 32.041 7.606  -4.823 -2.425 O7N   0WD 1  
0WD C7N   C7N   C 0 1 N N N 107.738 64.250 32.733 7.600  -3.879 -3.194 C7N   0WD 2  
0WD N7N   N7N   N 0 1 N N N 106.935 63.962 33.757 7.702  -4.090 -4.521 N7N   0WD 3  
0WD C3N   C3N   C 0 1 N N N 108.941 63.386 32.456 7.481  -2.561 -2.695 C3N   0WD 4  
0WD C2N   C2N   C 0 1 N N N 109.504 62.635 33.498 7.374  -2.365 -1.368 C2N   0WD 5  
0WD C4N   C4N   C 0 1 N N N 109.518 63.361 31.178 7.481  -1.407 -3.657 C4N   0WD 6  
0WD C5N   C5N   C 0 1 N N N 110.676 62.580 30.989 7.740  -0.112 -2.940 C5N   0WD 7  
0WD C6N   C6N   C 0 1 N N N 111.188 61.854 32.047 7.625  -0.008 -1.635 C6N   0WD 8  
0WD N1N   N1N   N 0 1 N N N 110.614 61.895 33.274 7.267  -1.101 -0.860 N1N   0WD 9  
0WD C1M   C1M   C 0 1 N N R 111.204 61.049 34.319 6.768  -0.901 0.503  C1M   0WD 10 
0WD C2M   C2M   C 0 1 N N R 111.407 61.577 35.731 7.848  -0.224 1.376  C2M   0WD 11 
0WD O2M   O2M   O 0 1 N N N 112.621 62.264 35.871 8.540  -1.198 2.161  O2M   0WD 12 
0WD C3M   C3M   C 0 1 N N S 111.406 60.299 36.559 7.048  0.735  2.286  C3M   0WD 13 
0WD O3M   O3M   O 0 1 N N N 112.652 59.609 36.544 7.224  0.384  3.660  O3M   0WD 14 
0WD O4M   O4M   O 0 1 N N N 110.300 59.964 34.535 5.661  0.026  0.501  O4M   0WD 15 
0WD C4M   C4M   C 0 1 N N R 110.441 59.394 35.839 5.580  0.524  1.855  C4M   0WD 16 
0WD C5M   C5M   C 0 1 N N N 109.092 59.281 36.550 4.819  1.851  1.889  C5M   0WD 17 
0WD O5M   O5M   O 0 1 N N N 108.390 60.501 36.351 3.454  1.627  1.528  O5M   0WD 18 
0WD PN    PN    P 0 1 N N N 106.831 60.709 36.671 2.361  2.807  1.460  PN    0WD 19 
0WD O1N   O1N   O 0 1 N N N 106.057 59.467 36.246 2.758  3.839  0.290  O1N   0WD 20 
0WD O2N   O2N   O 0 1 N N N 106.595 62.035 36.009 2.322  3.520  2.756  O2N   0WD 21 
0WD O3P   O3P   O 0 1 N N N 106.954 60.856 38.271 0.911  2.177  1.151  O3P   0WD 22 
0WD PA    PA    P 0 1 N N N 105.804 60.610 39.368 -0.596 2.735  1.255  PA    0WD 23 
0WD O1A   O1A   O 0 1 N N N 104.522 60.193 38.686 -0.658 4.098  0.683  O1A   0WD 24 
0WD O2A   O2A   O 0 1 N N N 105.845 61.762 40.335 -1.045 2.780  2.801  O2A   0WD 25 
0WD O5B   O5B   O 0 1 N N N 106.444 59.393 40.188 -1.585 1.764  0.437  O5B   0WD 26 
0WD C5B   C5B   C 0 1 N N N 107.572 59.652 41.015 -2.974 2.044  0.252  C5B   0WD 27 
0WD C4B   C4B   C 0 1 N N R 107.936 58.413 41.802 -3.616 0.923  -0.567 C4B   0WD 28 
0WD C3B   C3B   C 0 1 N N S 107.099 58.265 43.065 -5.089 1.268  -0.864 C3B   0WD 29 
0WD O3B   O3B   O 0 1 N N N 106.882 56.860 43.168 -5.312 1.339  -2.274 O3B   0WD 30 
0WD "P2'" "P2'" P 0 1 N N N 106.313 56.010 44.419 -5.834 2.670  -3.013 "P2'" 0WD 31 
0WD OP2   OP2   O 0 1 N N N 107.287 56.151 45.560 -5.846 2.430  -4.605 OP2   0WD 32 
0WD OP1   OP1   O 0 1 N N N 104.965 56.627 44.718 -7.325 3.013  -2.511 OP1   0WD 33 
0WD OP3   OP3   O 0 1 N N N 106.341 54.604 43.839 -4.933 3.799  -2.692 OP3   0WD 34 
0WD O4B   O4B   O 0 1 N N N 109.319 58.429 42.215 -3.608 -0.300 0.187  O4B   0WD 35 
0WD C1B   C1B   C 0 1 N N R 109.337 58.055 43.595 -4.810 -1.020 -0.162 C1B   0WD 36 
0WD C2B   C2B   C 0 1 N N R 108.088 58.767 44.090 -5.885 0.093  -0.247 C2B   0WD 37 
0WD O2B   O2B   O 0 1 N N N 107.757 58.500 45.444 -6.959 -0.300 -1.104 O2B   0WD 38 
0WD N9A   N9A   N 0 1 Y N N 110.482 58.488 44.422 -5.152 -1.990 0.880  N9A   0WD 39 
0WD C4A   C4A   C 0 1 Y N N 111.175 57.718 45.243 -5.907 -3.124 0.718  C4A   0WD 40 
0WD N3A   N3A   N 0 1 Y N N 111.039 56.300 45.490 -6.530 -3.698 -0.306 N3A   0WD 41 
0WD C2A   C2A   C 0 1 Y N N 111.875 55.704 46.366 -7.194 -4.823 -0.143 C2A   0WD 42 
0WD N1A   N1A   N 0 1 Y N N 112.828 56.398 47.017 -7.278 -5.433 1.025  N1A   0WD 43 
0WD C5A   C5A   C 0 1 Y N N 112.196 58.507 45.899 -5.965 -3.735 1.982  C5A   0WD 44 
0WD C6A   C6A   C 0 1 Y N N 113.040 57.736 46.840 -6.687 -4.935 2.106  C6A   0WD 45 
0WD N6A   N6A   N 0 1 N N N 114.009 58.380 47.519 -6.780 -5.581 3.326  N6A   0WD 46 
0WD N7A   N7A   N 0 1 Y N N 112.045 59.766 45.445 -5.257 -2.957 2.835  N7A   0WD 47 
0WD C8A   C8A   C 0 1 Y N N 111.002 59.734 44.559 -4.774 -1.935 2.189  C8A   0WD 48 
0WD H1    H1    H 0 1 N N N 106.163 64.561 33.971 7.780  -4.994 -4.864 H1    0WD 49 
0WD H2    H2    H 0 1 N N N 107.104 63.147 34.311 7.697  -3.338 -5.134 H2    0WD 50 
0WD H3    H3    H 0 1 N N N 109.052 62.647 34.479 7.373  -3.214 -0.700 H3    0WD 51 
0WD H4    H4    H 0 1 N N N 109.776 64.398 30.916 8.259  -1.564 -4.404 H4    0WD 52 
0WD H5    H5    H 0 1 N N N 111.160 62.549 30.024 8.029  0.756  -3.513 H5    0WD 53 
0WD H6    H6    H 0 1 N N N 112.064 61.241 31.893 7.815  0.942  -1.158 H6    0WD 54 
0WD H7    H7    H 0 1 N N N 112.166 60.657 33.958 6.466  -1.853 0.939  H7    0WD 55 
0WD H8    H8    H 0 1 N N N 110.552 62.206 36.019 8.549  0.332  0.754  H8    0WD 56 
0WD H9    H9    H 0 1 N N N 112.708 62.576 36.764 9.229  -0.827 2.729  H9    0WD 57 
0WD H10   H10   H 0 1 N N N 111.060 60.503 37.583 7.352  1.767  2.114  H10   0WD 58 
0WD H11   H11   H 0 1 N N N 112.587 58.825 37.076 8.139  0.442  3.967  H11   0WD 59 
0WD H12   H12   H 0 1 N N N 110.883 58.390 35.764 5.094  -0.208 2.500  H12   0WD 60 
0WD H13   H13   H 0 1 N N N 108.516 58.445 36.127 4.865  2.270  2.894  H13   0WD 61 
0WD H14   H14   H 0 1 N N N 109.249 59.111 37.625 5.271  2.548  1.184  H14   0WD 62 
0WD H15   H15   H 0 1 N N N 105.457 59.692 35.545 2.802  3.440  -0.589 H15   0WD 63 
0WD H16   H16   H 0 1 N N N 104.976 62.137 40.419 -1.028 1.919  3.240  H16   0WD 64 
0WD H17   H17   H 0 1 N N N 108.425 59.946 40.385 -3.464 2.111  1.224  H17   0WD 65 
0WD H18   H18   H 0 1 N N N 107.332 60.468 41.712 -3.086 2.991  -0.277 H18   0WD 66 
0WD H19   H19   H 0 1 N N N 107.757 57.534 41.166 -3.070 0.787  -1.501 H19   0WD 67 
0WD H20   H20   H 0 1 N N N 106.177 58.863 43.034 -5.363 2.210  -0.388 H20   0WD 68 
0WD H21   H21   H 0 1 N N N 107.735 55.325 45.698 -6.150 3.192  -5.116 H21   0WD 69 
0WD H22   H22   H 0 1 N N N 104.277 56.013 44.488 -7.970 2.316  -2.690 H22   0WD 70 
0WD H23   H23   H 0 1 N N N 109.196 56.969 43.698 -4.694 -1.515 -1.126 H23   0WD 71 
0WD H24   H24   H 0 1 N N N 108.224 59.849 43.946 -6.256 0.352  0.745  H24   0WD 72 
0WD H25   H25   H 0 1 N N N 108.434 58.851 46.011 -7.488 -1.033 -0.761 H25   0WD 73 
0WD H26   H26   H 0 1 N N N 111.777 54.644 46.549 -7.690 -5.262 -0.996 H26   0WD 74 
0WD H27   H27   H 0 1 N N N 114.485 57.733 48.115 -6.344 -5.207 4.108  H27   0WD 75 
0WD H28   H28   H 0 1 N N N 114.660 58.779 46.873 -7.280 -6.409 3.399  H28   0WD 76 
0WD H29   H29   H 0 1 N N N 110.635 60.601 44.030 -4.167 -1.156 2.626  H29   0WD 77 
0WD H30   H30   H 0 1 N N N 108.754 62.986 30.481 6.512  -1.353 -4.153 H30   0WD 78 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0WD C5N   C4N   SING N N 1  
0WD C5N   C6N   DOUB N N 2  
0WD C4N   C3N   SING N N 3  
0WD O7N   C7N   DOUB N N 4  
0WD C6N   N1N   SING N N 5  
0WD C3N   C7N   SING N N 6  
0WD C3N   C2N   DOUB N N 7  
0WD C7N   N7N   SING N N 8  
0WD N1N   C2N   SING N N 9  
0WD N1N   C1M   SING N N 10 
0WD C1M   O4M   SING N N 11 
0WD C1M   C2M   SING N N 12 
0WD O4M   C4M   SING N N 13 
0WD C2M   O2M   SING N N 14 
0WD C2M   C3M   SING N N 15 
0WD C4M   C5M   SING N N 16 
0WD C4M   C3M   SING N N 17 
0WD O2N   PN    DOUB N N 18 
0WD O1N   PN    SING N N 19 
0WD O5M   C5M   SING N N 20 
0WD O5M   PN    SING N N 21 
0WD O3M   C3M   SING N N 22 
0WD PN    O3P   SING N N 23 
0WD O3P   PA    SING N N 24 
0WD O1A   PA    DOUB N N 25 
0WD PA    O5B   SING N N 26 
0WD PA    O2A   SING N N 27 
0WD O5B   C5B   SING N N 28 
0WD C5B   C4B   SING N N 29 
0WD C4B   O4B   SING N N 30 
0WD C4B   C3B   SING N N 31 
0WD O4B   C1B   SING N N 32 
0WD C3B   O3B   SING N N 33 
0WD C3B   C2B   SING N N 34 
0WD O3B   "P2'" SING N N 35 
0WD C1B   C2B   SING N N 36 
0WD C1B   N9A   SING N N 37 
0WD OP3   "P2'" DOUB N N 38 
0WD C2B   O2B   SING N N 39 
0WD "P2'" OP1   SING N N 40 
0WD "P2'" OP2   SING N N 41 
0WD N9A   C8A   SING Y N 42 
0WD N9A   C4A   SING Y N 43 
0WD C8A   N7A   DOUB Y N 44 
0WD C4A   N3A   DOUB Y N 45 
0WD C4A   C5A   SING Y N 46 
0WD N7A   C5A   SING Y N 47 
0WD N3A   C2A   SING Y N 48 
0WD C5A   C6A   DOUB Y N 49 
0WD C2A   N1A   DOUB Y N 50 
0WD C6A   N1A   SING Y N 51 
0WD C6A   N6A   SING N N 52 
0WD N7N   H1    SING N N 53 
0WD N7N   H2    SING N N 54 
0WD C2N   H3    SING N N 55 
0WD C4N   H4    SING N N 56 
0WD C5N   H5    SING N N 57 
0WD C6N   H6    SING N N 58 
0WD C1M   H7    SING N N 59 
0WD C2M   H8    SING N N 60 
0WD O2M   H9    SING N N 61 
0WD C3M   H10   SING N N 62 
0WD O3M   H11   SING N N 63 
0WD C4M   H12   SING N N 64 
0WD C5M   H13   SING N N 65 
0WD C5M   H14   SING N N 66 
0WD O1N   H15   SING N N 67 
0WD O2A   H16   SING N N 68 
0WD C5B   H17   SING N N 69 
0WD C5B   H18   SING N N 70 
0WD C4B   H19   SING N N 71 
0WD C3B   H20   SING N N 72 
0WD OP2   H21   SING N N 73 
0WD OP1   H22   SING N N 74 
0WD C1B   H23   SING N N 75 
0WD C2B   H24   SING N N 76 
0WD O2B   H25   SING N N 77 
0WD C2A   H26   SING N N 78 
0WD N6A   H27   SING N N 79 
0WD N6A   H28   SING N N 80 
0WD C8A   H29   SING N N 81 
0WD C4N   H30   SING N N 82 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0WD InChI            InChI                1.03  
;InChI=1S/C21H30N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-15(31)16(44-46(33,34)35)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)14(30)20(42-10)27-3-1-2-9(4-27)18(23)32/h1,3-4,7-8,10-11,13-16,20-21,29-31H,2,5-6H2,(H2,23,32)(H,36,37)(H,38,39)(H2,22,24,25)(H2,33,34,35)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
;
0WD InChIKey         InChI                1.03  ONOVTRNLNDQWGA-NNYOXOHSSA-N 
0WD SMILES_CANONICAL CACTVS               3.370 "NC(=O)C1=CN(C=CC1)[C@@H]2O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O[P](O)(O)=O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O" 
0WD SMILES           CACTVS               3.370 "NC(=O)C1=CN(C=CC1)[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O[P](O)(O)=O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O" 
0WD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)N5C=CCC(=C5)C(=O)N)O)O)OP(=O)(O)O)O)N" 
0WD SMILES           "OpenEye OEToolkits" 1.7.6 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)N5C=CCC(=C5)C(=O)N)O)O)OP(=O)(O)O)O)N" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0WD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 
"[[(2R,3S,4R,5R)-5-(3-aminocarbonyl-4H-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0WD "Create component" 2012-07-23 RCSB 
0WD "Initial release"  2012-09-14 RCSB 
# 
