data_2AD
# 
_chem_comp.id                                    2AD 
_chem_comp.name                                  "2'-AMINO-2'-DEOXYADENOSINE" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C10 H14 N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2003-02-04 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        266.257 
_chem_comp.one_letter_code                       X 
_chem_comp.three_letter_code                     2AD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1OBC 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
2AD "O5'"  O5*  O 0 1 N N N 2.507  52.349 59.996 -2.302 0.750  -4.305 "O5'"  2AD 1  
2AD "C5'"  C5*  C 0 1 N N N 1.384  51.926 59.206 -1.225 -0.175 -4.142 "C5'"  2AD 2  
2AD "C4'"  C4*  C 0 1 N N R 0.120  52.600 59.691 -0.195 0.406  -3.172 "C4'"  2AD 3  
2AD "O4'"  O4*  O 0 1 N N N 0.262  54.039 59.573 -0.793 0.605  -1.880 "O4'"  2AD 4  
2AD "C3'"  C3*  C 0 1 N N S -1.115 52.277 58.866 0.970  -0.584 -2.989 "C3'"  2AD 5  
2AD "O3'"  O3*  O 0 1 N N N -1.719 51.072 59.328 2.203  0.008  -3.402 "O3'"  2AD 6  
2AD "C2'"  C2*  C 0 1 N N R -2.011 53.490 59.091 0.990  -0.871 -1.468 "C2'"  2AD 7  
2AD "C1'"  C1*  C 0 1 N N R -1.009 54.616 59.327 0.233  0.354  -0.896 "C1'"  2AD 8  
2AD N9     N9   N 0 1 Y N N -0.892 55.555 58.217 -0.363 0.037  0.403  N9     2AD 9  
2AD C8     C8   C 0 1 Y N N -0.800 55.285 56.872 -1.577 -0.547 0.612  C8     2AD 10 
2AD N7     N7   N 0 1 Y N N -0.671 56.355 56.128 -1.792 -0.681 1.888  N7     2AD 11 
2AD C5     C5   C 0 1 Y N N -0.687 57.399 57.041 -0.733 -0.193 2.578  C5     2AD 12 
2AD C6     C6   C 0 1 Y N N -0.586 58.790 56.885 -0.411 -0.074 3.940  C6     2AD 13 
2AD N6     N6   N 0 1 N N N -0.432 59.391 55.703 -1.286 -0.517 4.916  N6     2AD 14 
2AD N1     N1   N 0 1 Y N N -0.649 59.554 57.999 0.753  0.473  4.270  N1     2AD 15 
2AD C2     C2   C 0 1 Y N N -0.803 58.947 59.184 1.595  0.898  3.346  C2     2AD 16 
2AD N3     N3   N 0 1 Y N N -0.904 57.651 59.458 1.336  0.807  2.058  N3     2AD 17 
2AD C4     C4   C 0 1 Y N N -0.835 56.922 58.330 0.198  0.268  1.633  C4     2AD 18 
2AD N      N    N 0 1 N N N -3.027 53.453 60.159 2.368  -0.919 -0.961 N      2AD 19 
2AD "H5'"  H5*  H 0 1 N N N 2.990  51.554 60.336 -2.927 0.345  -4.922 "H5'"  2AD 20 
2AD "H5'1" 1H5* H 0 0 N N N 1.558  52.195 58.154 -0.753 -0.357 -5.107 "H5'1" 2AD 21 
2AD "H5'2" 2H5* H 0 0 N N N 1.269  50.836 59.301 -1.610 -1.113 -3.743 "H5'2" 2AD 22 
2AD "H4'"  H4*  H 0 1 N N N -0.012 52.236 60.721 0.181  1.354  -3.555 "H4'"  2AD 23 
2AD "H3'"  H3*  H 0 1 N N N -0.906 52.106 57.800 0.783  -1.501 -3.548 "H3'"  2AD 24 
2AD HA     HA   H 0 1 N N N -2.704 51.162 59.293 2.133  0.163  -4.354 HA     2AD 25 
2AD "H2'"  H2*  H 0 1 N N N -2.674 53.589 58.218 0.461  -1.796 -1.239 "H2'"  2AD 26 
2AD "H1'"  H1*  H 0 1 N N N -1.379 55.196 60.185 0.901  1.212  -0.811 "H1'"  2AD 27 
2AD H8     H8   H 0 1 N N N -0.831 54.301 56.474 -2.260 -0.853 -0.166 H8     2AD 28 
2AD H6N1   1H6N H 0 0 N N N -0.383 58.847 54.871 -1.053 -0.429 5.854  H6N1   2AD 29 
2AD H6N2   2H6N H 0 0 N N N -0.366 60.383 55.654 -2.134 -0.915 4.663  H6N2   2AD 30 
2AD H2     H2   H 0 1 N Y N -0.851 59.595 60.024 2.531  1.338  3.658  H2     2AD 31 
2AD HN1    1HN  H 0 1 N N N -3.247 52.474 60.390 2.813  -1.706 -1.408 HN1    2AD 32 
2AD HN2    2HN  H 0 1 N N N -2.663 53.930 60.996 2.832  -0.091 -1.303 HN2    2AD 33 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
2AD "O5'" "C5'"  SING N N 1  
2AD "O5'" "H5'"  SING N N 2  
2AD "C5'" "C4'"  SING N N 3  
2AD "C5'" "H5'1" SING N N 4  
2AD "C5'" "H5'2" SING N N 5  
2AD "C4'" "O4'"  SING N N 6  
2AD "C4'" "C3'"  SING N N 7  
2AD "C4'" "H4'"  SING N N 8  
2AD "O4'" "C1'"  SING N N 9  
2AD "C3'" "O3'"  SING N N 10 
2AD "C3'" "C2'"  SING N N 11 
2AD "C3'" "H3'"  SING N N 12 
2AD "O3'" HA     SING N N 13 
2AD "C2'" "C1'"  SING N N 14 
2AD "C2'" N      SING N N 15 
2AD "C2'" "H2'"  SING N N 16 
2AD "C1'" N9     SING N N 17 
2AD "C1'" "H1'"  SING N N 18 
2AD N9    C8     SING Y N 19 
2AD N9    C4     SING Y N 20 
2AD C8    N7     DOUB Y N 21 
2AD C8    H8     SING N N 22 
2AD N7    C5     SING Y N 23 
2AD C5    C6     DOUB Y N 24 
2AD C5    C4     SING Y N 25 
2AD C6    N6     SING N N 26 
2AD C6    N1     SING Y N 27 
2AD N6    H6N1   SING N N 28 
2AD N6    H6N2   SING N N 29 
2AD N1    C2     DOUB Y N 30 
2AD C2    N3     SING Y N 31 
2AD C2    H2     SING N N 32 
2AD N3    C4     DOUB Y N 33 
2AD N     HN1    SING N N 34 
2AD N     HN2    SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
2AD SMILES           ACDLabs              10.04 "n2c1c(ncnc1n(c2)C3OC(C(O)C3N)CO)N"                                                                                                     
2AD SMILES_CANONICAL CACTVS               3.341 "N[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1n2cnc3c(N)ncnc23"                                                                                     
2AD SMILES           CACTVS               3.341 "N[CH]1[CH](O)[CH](CO)O[CH]1n2cnc3c(N)ncnc23"                                                                                           
2AD SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)N)N"                                                                               
2AD SMILES           "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CO)O)N)N"                                                                                                 
2AD InChI            InChI                1.03  "InChI=1S/C10H14N6O3/c11-5-7(18)4(1-17)19-10(5)16-3-15-6-8(12)13-2-14-9(6)16/h2-5,7,10,17-18H,1,11H2,(H2,12,13,14)/t4-,5-,7-,10-/m1/s1" 
2AD InChIKey         InChI                1.03  CQKMBZHLOYVGHW-QYYRPYCUSA-N                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
2AD "SYSTEMATIC NAME" ACDLabs              10.04 "2'-amino-2'-deoxyadenosine"                                               
2AD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3S,4R,5R)-4-amino-5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-ol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
2AD "Create component"  2003-02-04 EBI  
2AD "Modify descriptor" 2011-06-04 RCSB 
# 
