data_3JD
#

_chem_comp.id                                   3JD
_chem_comp.name                                 "2-{4-[(3S)-piperidin-3-yl]phenyl}-2H-indazole-7-carboxamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H20 N4 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        Niraparib
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-08-26
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       320.388
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    3JD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4R6E
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
3JD  CAM  CAM  C  0  1  N  N  N  -65.336  25.275  29.660  -5.016  -0.347   1.266  CAM  3JD   1  
3JD  CAK  CAK  C  0  1  N  N  N  -65.225  25.639  31.189  -6.540  -0.490   1.227  CAK  3JD   2  
3JD  CAL  CAL  C  0  1  N  N  N  -65.709  27.059  31.517  -6.946  -1.228  -0.050  CAL  3JD   3  
3JD  NAP  NAP  N  0  1  N  N  N  -67.098  27.280  31.094  -6.477  -0.475  -1.221  NAP  3JD   4  
3JD  CAN  CAN  C  0  1  N  N  N  -67.669  26.369  30.011  -5.013  -0.366  -1.231  CAN  3JD   5  
3JD  CAW  CAW  C  0  1  N  N  S  -66.649  25.819  28.981  -4.549   0.397   0.012  CAW  3JD   6  
3JD  CAR  CAR  C  0  1  Y  N  N  -67.301  24.867  28.057  -3.045   0.490   0.012  CAR  3JD   7  
3JD  CAF  CAF  C  0  1  Y  N  N  -67.233  25.056  26.663  -2.282  -0.664   0.014  CAF  3JD   8  
3JD  CAH  CAH  C  0  1  Y  N  N  -67.791  24.095  25.804  -0.904  -0.582   0.010  CAH  3JD   9  
3JD  CAE  CAE  C  0  1  Y  N  N  -68.024  23.727  28.561  -2.430   1.728   0.005  CAE  3JD  10  
3JD  CAG  CAG  C  0  1  Y  N  N  -68.652  22.790  27.649  -1.052   1.817   0.005  CAG  3JD  11  
3JD  CAS  CAS  C  0  1  Y  N  N  -68.612  23.052  26.212  -0.283   0.660   0.003  CAS  3JD  12  
3JD  NAX  NAX  N  0  1  Y  N  N  -69.187  22.194  25.304   1.115   0.747  -0.002  NAX  3JD  13  
3JD  CAJ  CAJ  C  0  1  Y  N  N  -68.720  21.955  24.062   1.816   1.891  -0.003  CAJ  3JD  14  
3JD  NAO  NAO  N  0  1  Y  N  N  -70.118  21.366  25.560   1.988  -0.348   0.001  NAO  3JD  15  
3JD  CAV  CAV  C  0  1  Y  N  N  -70.468  20.646  24.516   3.227   0.092  -0.004  CAV  3JD  16  
3JD  CAU  CAU  C  0  1  Y  N  N  -69.538  21.003  23.499   3.161   1.563  -0.001  CAU  3JD  17  
3JD  CAI  CAI  C  0  1  Y  N  N  -69.576  20.419  22.220   4.363   2.297  -0.002  CAI  3JD  18  
3JD  CAC  CAC  C  0  1  Y  N  N  -70.622  19.469  21.974   5.562   1.659  -0.001  CAC  3JD  19  
3JD  CAD  CAD  C  0  1  Y  N  N  -71.558  19.101  23.024   5.673   0.275   0.001  CAD  3JD  20  
3JD  CAT  CAT  C  0  1  Y  N  N  -71.487  19.697  24.341   4.551  -0.539  -0.004  CAT  3JD  21  
3JD  CAQ  CAQ  C  0  1  N  N  N  -72.426  19.345  25.372   4.685  -2.005  -0.002  CAQ  3JD  22  
3JD  OAB  OAB  O  0  1  N  N  N  -73.282  18.501  25.186   3.691  -2.706  -0.007  OAB  3JD  23  
3JD  NAA  NAA  N  0  1  N  N  N  -72.425  19.933  26.575   5.908  -2.569   0.005  NAA  3JD  24  
3JD  H1   H1   H  0  1  N  N  N  -65.320  24.180  29.560  -4.725   0.215   2.153  H1   3JD  25  
3JD  H2   H2   H  0  1  N  N  N  -64.469  25.704  29.136  -4.558  -1.336   1.295  H2   3JD  26  
3JD  H3   H3   H  0  1  N  N  N  -65.832  24.923  31.762  -6.874  -1.057   2.097  H3   3JD  27  
3JD  H4   H4   H  0  1  N  N  N  -64.171  25.552  31.492  -6.998   0.499   1.238  H4   3JD  28  
3JD  H5   H5   H  0  1  N  N  N  -65.061  27.783  31.001  -6.498  -2.221  -0.054  H5   3JD  29  
3JD  H6   H6   H  0  1  N  N  N  -65.640  27.215  32.604  -8.032  -1.318  -0.088  H6   3JD  30  
3JD  H7   H7   H  0  1  N  N  N  -67.160  28.219  30.756  -6.908   0.436  -1.262  H7   3JD  31  
3JD  H9   H9   H  0  1  N  N  N  -68.431  26.938  29.459  -4.575  -1.364  -1.229  H9   3JD  32  
3JD  H10  H10  H  0  1  N  N  N  -68.142  25.510  30.509  -4.695   0.169  -2.126  H10  3JD  33  
3JD  H11  H11  H  0  1  N  N  N  -66.335  26.683  28.376  -4.976   1.400   0.004  H11  3JD  34  
3JD  H12  H12  H  0  1  N  N  N  -66.755  25.935  26.257  -2.765  -1.630   0.020  H12  3JD  35  
3JD  H13  H13  H  0  1  N  N  N  -67.565  24.173  24.751  -0.308  -1.484   0.012  H13  3JD  36  
3JD  H14  H14  H  0  1  N  N  N  -68.099  23.569  29.627  -3.028   2.628   0.000  H14  3JD  37  
3JD  H15  H15  H  0  1  N  N  N  -69.145  21.907  28.029  -0.572   2.785  -0.001  H15  3JD  38  
3JD  H16  H16  H  0  1  N  N  N  -67.865  22.423  23.597   1.404   2.889  -0.005  H16  3JD  39  
3JD  H17  H17  H  0  1  N  N  N  -68.852  20.674  21.460   4.330   3.377  -0.004  H17  3JD  40  
3JD  H18  H18  H  0  1  N  N  N  -70.716  19.021  20.996   6.465   2.252  -0.002  H18  3JD  41  
3JD  H19  H19  H  0  1  N  N  N  -72.323  18.367  22.817   6.654  -0.177   0.001  H19  3JD  42  
3JD  H20  H20  H  0  1  N  N  N  -73.104  19.670  27.261   6.701  -2.010   0.009  H20  3JD  43  
3JD  H21  H21  H  0  1  N  N  N  -71.745  20.635  26.788   5.997  -3.535   0.007  H21  3JD  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3JD  CAC  CAI  DOUB  Y  N   1  
3JD  CAC  CAD  SING  Y  N   2  
3JD  CAI  CAU  SING  Y  N   3  
3JD  CAD  CAT  DOUB  Y  N   4  
3JD  CAU  CAJ  DOUB  Y  N   5  
3JD  CAU  CAV  SING  Y  N   6  
3JD  CAJ  NAX  SING  Y  N   7  
3JD  CAT  CAV  SING  Y  N   8  
3JD  CAT  CAQ  SING  N  N   9  
3JD  CAV  NAO  DOUB  Y  N  10  
3JD  OAB  CAQ  DOUB  N  N  11  
3JD  NAX  NAO  SING  Y  N  12  
3JD  NAX  CAS  SING  N  N  13  
3JD  CAQ  NAA  SING  N  N  14  
3JD  CAH  CAS  DOUB  Y  N  15  
3JD  CAH  CAF  SING  Y  N  16  
3JD  CAS  CAG  SING  Y  N  17  
3JD  CAF  CAR  DOUB  Y  N  18  
3JD  CAG  CAE  DOUB  Y  N  19  
3JD  CAR  CAE  SING  Y  N  20  
3JD  CAR  CAW  SING  N  N  21  
3JD  CAW  CAM  SING  N  N  22  
3JD  CAW  CAN  SING  N  N  23  
3JD  CAM  CAK  SING  N  N  24  
3JD  CAN  NAP  SING  N  N  25  
3JD  NAP  CAL  SING  N  N  26  
3JD  CAK  CAL  SING  N  N  27  
3JD  CAM  H1   SING  N  N  28  
3JD  CAM  H2   SING  N  N  29  
3JD  CAK  H3   SING  N  N  30  
3JD  CAK  H4   SING  N  N  31  
3JD  CAL  H5   SING  N  N  32  
3JD  CAL  H6   SING  N  N  33  
3JD  NAP  H7   SING  N  N  34  
3JD  CAN  H9   SING  N  N  35  
3JD  CAN  H10  SING  N  N  36  
3JD  CAW  H11  SING  N  N  37  
3JD  CAF  H12  SING  N  N  38  
3JD  CAH  H13  SING  N  N  39  
3JD  CAE  H14  SING  N  N  40  
3JD  CAG  H15  SING  N  N  41  
3JD  CAJ  H16  SING  N  N  42  
3JD  CAI  H17  SING  N  N  43  
3JD  CAC  H18  SING  N  N  44  
3JD  CAD  H19  SING  N  N  45  
3JD  NAA  H20  SING  N  N  46  
3JD  NAA  H21  SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
3JD  SMILES            ACDLabs               12.01  "O=C(c1cccc2cn(nc12)c3ccc(cc3)C4CCCNC4)N"  
3JD  InChI             InChI                 1.03   "InChI=1S/C19H20N4O/c20-19(24)17-5-1-3-15-12-23(22-18(15)17)16-8-6-13(7-9-16)14-4-2-10-21-11-14/h1,3,5-9,12,14,21H,2,4,10-11H2,(H2,20,24)/t14-/m1/s1"  
3JD  InChIKey          InChI                 1.03   PCHKPVIQAHNQLW-CQSZACIVSA-N  
3JD  SMILES_CANONICAL  CACTVS                3.385  "NC(=O)c1cccc2cn(nc12)c3ccc(cc3)[C@@H]4CCCNC4"  
3JD  SMILES            CACTVS                3.385  "NC(=O)c1cccc2cn(nc12)c3ccc(cc3)[CH]4CCCNC4"  
3JD  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "c1cc2cn(nc2c(c1)C(=O)N)c3ccc(cc3)[C@@H]4CCCNC4"  
3JD  SMILES            "OpenEye OEToolkits"  1.7.6  "c1cc2cn(nc2c(c1)C(=O)N)c3ccc(cc3)C4CCCNC4"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
3JD  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-{4-[(3S)-piperidin-3-yl]phenyl}-2H-indazole-7-carboxamide"  
3JD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "2-[4-[(3S)-piperidin-3-yl]phenyl]indazole-7-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
3JD  "Create component"  2014-08-26  RCSB  
3JD  "Initial release"   2015-09-09  RCSB  
3JD  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     3JD
_pdbx_chem_comp_synonyms.name        Niraparib
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
