data_CTD
# 
_chem_comp.id                                    CTD 
_chem_comp.name                                  3-DEAZACYTIDINE 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H14 N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        242.229 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     CTD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1ALN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
CTD N1     N1   N 0 1 N N N 35.234 48.795 9.511  -0.055 -0.153 1.019  N1     CTD 1  
CTD C2     C2   C 0 1 N N N 36.089 47.970 8.832  -0.438 -1.019 1.975  C2     CTD 2  
CTD C3     C3   C 0 1 N N N 35.648 46.637 8.615  -0.163 -0.749 3.319  C3     CTD 3  
CTD C4     C4   C 0 1 N N N 34.389 46.278 8.902  0.505  0.418  3.649  C4     CTD 4  
CTD C5     C5   C 0 1 N N N 33.542 47.193 9.601  0.883  1.302  2.616  C5     CTD 5  
CTD C6     C6   C 0 1 N N N 33.979 48.428 9.900  0.600  0.995  1.333  C6     CTD 6  
CTD O2     O2   O 0 1 N N N 37.145 48.357 8.329  -1.026 -2.044 1.668  O2     CTD 7  
CTD N4     N4   N 0 1 N N N 33.946 45.083 8.542  0.791  0.715  4.969  N4     CTD 8  
CTD "C1'"  C1*  C 0 1 N N R 35.754 50.283 9.862  -0.351 -0.452 -0.383 "C1'"  CTD 9  
CTD "C2'"  C2*  C 0 1 N N R 35.661 51.640 9.271  -1.206 0.673  -1.005 "C2'"  CTD 10 
CTD "O2'"  O2*  O 0 1 N N N 36.553 51.751 8.130  -2.589 0.313  -1.015 "O2'"  CTD 11 
CTD "C3'"  C3*  C 0 1 N N S 35.989 52.454 10.432 -0.668 0.797  -2.450 "C3'"  CTD 12 
CTD "C4'"  C4*  C 0 1 N N R 35.504 51.602 11.604 0.444  -0.271 -2.529 "C4'"  CTD 13 
CTD "O4'"  O4*  O 0 1 N N N 35.707 50.234 11.289 0.864  -0.467 -1.161 "O4'"  CTD 14 
CTD "O3'"  O3*  O 0 1 N N N 37.377 52.621 10.545 -1.701 0.515  -3.396 "O3'"  CTD 15 
CTD "C5'"  C5*  C 0 1 N N N 34.147 51.898 12.094 1.612  0.234  -3.378 "C5'"  CTD 16 
CTD "O5'"  O5*  O 0 1 N N N 33.248 51.652 11.021 2.658  -0.738 -3.377 "O5'"  CTD 17 
CTD H3     H3   H 0 1 N N N 36.307 45.851 8.208  -0.467 -1.442 4.090  H3     CTD 18 
CTD H5     H5   H 0 1 N N N 32.517 46.937 9.920  1.405  2.218  2.851  H5     CTD 19 
CTD H6     H6   H 0 1 N N N 33.323 49.123 10.451 0.895  1.672  0.546  H6     CTD 20 
CTD HN41   1HN4 H 0 0 N N N 32.987 44.809 8.760  1.259  1.535  5.191  HN41   CTD 21 
CTD HN42   2HN4 H 0 0 N N N 34.577 44.376 8.919  0.520  0.105  5.673  HN42   CTD 22 
CTD "H1'"  H1*  H 0 1 N N N 36.573 50.362 9.110  -0.866 -1.409 -0.466 "H1'"  CTD 23 
CTD "H2'"  H2*  H 0 1 N N N 34.684 51.942 8.826  -1.059 1.607  -0.461 "H2'"  CTD 24 
CTD "HO2'" *HO2 H 0 0 N N N 36.493 52.620 7.751  -3.060 1.026  -1.468 "HO2'" CTD 25 
CTD "H3'"  H3*  H 0 1 N N N 35.533 53.470 10.381 -0.256 1.791  -2.621 "H3'"  CTD 26 
CTD "H4'"  H4*  H 0 1 N N N 36.124 51.879 12.487 0.050  -1.199 -2.942 "H4'"  CTD 27 
CTD "HO3'" *HO3 H 0 0 N N N 37.591 53.152 11.302 -1.294 0.546  -4.272 "HO3'" CTD 28 
CTD "H5'1" 1H5* H 0 0 N N N 33.885 51.335 13.020 1.273  0.402  -4.400 "H5'1" CTD 29 
CTD "H5'2" 2H5* H 0 0 N N N 34.050 52.925 12.517 1.986  1.170  -2.961 "H5'2" CTD 30 
CTD "HO5'" *HO5 H 0 0 N N N 32.372 51.842 11.337 3.373  -0.381 -3.922 "HO5'" CTD 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CTD N1    C2     SING N N 1  
CTD N1    C6     SING N N 2  
CTD N1    "C1'"  SING N N 3  
CTD C2    C3     SING N N 4  
CTD C2    O2     DOUB N N 5  
CTD C3    C4     DOUB N N 6  
CTD C3    H3     SING N N 7  
CTD C4    C5     SING N N 8  
CTD C4    N4     SING N N 9  
CTD C5    C6     DOUB N N 10 
CTD C5    H5     SING N N 11 
CTD C6    H6     SING N N 12 
CTD N4    HN41   SING N N 13 
CTD N4    HN42   SING N N 14 
CTD "C1'" "C2'"  SING N N 15 
CTD "C1'" "O4'"  SING N N 16 
CTD "C1'" "H1'"  SING N N 17 
CTD "C2'" "O2'"  SING N N 18 
CTD "C2'" "C3'"  SING N N 19 
CTD "C2'" "H2'"  SING N N 20 
CTD "O2'" "HO2'" SING N N 21 
CTD "C3'" "C4'"  SING N N 22 
CTD "C3'" "O3'"  SING N N 23 
CTD "C3'" "H3'"  SING N N 24 
CTD "C4'" "O4'"  SING N N 25 
CTD "C4'" "C5'"  SING N N 26 
CTD "C4'" "H4'"  SING N N 27 
CTD "O3'" "HO3'" SING N N 28 
CTD "C5'" "O5'"  SING N N 29 
CTD "C5'" "H5'1" SING N N 30 
CTD "C5'" "H5'2" SING N N 31 
CTD "O5'" "HO5'" SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
CTD SMILES           ACDLabs              10.04 "O=C1C=C(N)C=CN1C2OC(C(O)C2O)CO"                                                                                       
CTD SMILES_CANONICAL CACTVS               3.341 "NC1=CC(=O)N(C=C1)[C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O"                                                                   
CTD SMILES           CACTVS               3.341 "NC1=CC(=O)N(C=C1)[CH]2O[CH](CO)[CH](O)[CH]2O"                                                                         
CTD SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1=CN(C(=O)C=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O"                                                                 
CTD SMILES           "OpenEye OEToolkits" 1.5.0 "C1=CN(C(=O)C=C1N)C2C(C(C(O2)CO)O)O"                                                                                   
CTD InChI            InChI                1.03  "InChI=1S/C10H14N2O5/c11-5-1-2-12(7(14)3-5)10-9(16)8(15)6(4-13)17-10/h1-3,6,8-10,13,15-16H,4,11H2/t6-,8-,9-,10-/m1/s1" 
CTD InChIKey         InChI                1.03  OGADSZTVCUXSOK-PEBGCTIMSA-N                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
CTD "SYSTEMATIC NAME" ACDLabs              10.04 "4-amino-1-beta-D-ribofuranosylpyridin-2(1H)-one"                                   
CTD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "4-amino-1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyridin-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
CTD "Create component"  1999-07-08 RCSB 
CTD "Modify descriptor" 2011-06-04 RCSB 
# 
