data_JPD
# 
_chem_comp.id                                    JPD 
_chem_comp.name                                  "methyl (1S,3S,4R)-4-hydroxy-3-[(1S)-1-hydroxypropyl]-2-azabicyclo[2.2.2]octane-2-carboxylate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H21 N O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-09-12 
_chem_comp.pdbx_modified_date                    2018-10-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        243.299 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JPD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5QG4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JPD C10  C1  C 0 1 N N N -36.243 31.640 -9.466  1.977  -0.163 -0.197 C10  JPD 1  
JPD C13  C2  C 0 1 N N N -34.058 31.141 -8.330  1.196  -2.511 -0.596 C13  JPD 2  
JPD C17  C3  C 0 1 N N N -37.531 33.868 -4.395  -3.968 -1.276 0.003  C17  JPD 3  
JPD C01  C4  C 0 1 N N N -40.021 33.564 -8.285  -1.415 3.421  0.672  C01  JPD 4  
JPD C02  C5  C 0 1 N N N -38.690 32.928 -8.729  -1.168 2.066  0.006  C02  JPD 5  
JPD C03  C6  C 0 1 N N S -38.209 31.770 -7.850  0.279  1.632  0.254  C03  JPD 6  
JPD O04  O1  O 0 1 N N N -38.579 31.930 -6.566  1.166  2.668  -0.171 O04  JPD 7  
JPD C05  C7  C 0 1 N N S -36.640 31.561 -7.992  0.571  0.355  -0.536 C05  JPD 8  
JPD N06  N1  N 0 1 N N N -35.667 32.437 -7.190  -0.378 -0.708 -0.147 N06  JPD 9  
JPD C07  C8  C 0 1 N N N -34.377 32.515 -7.842  0.222  -1.926 0.434  C07  JPD 10 
JPD C08  C9  C 0 1 N N N -34.440 33.338 -9.105  1.014  -1.515 1.681  C08  JPD 11 
JPD C09  C10 C 0 1 N N N -35.784 33.035 -9.784  2.052  -0.457 1.303  C09  JPD 12 
JPD O11  O2  O 0 1 N N N -37.353 31.146 -10.262 2.949  0.826  -0.543 O11  JPD 13 
JPD C12  C11 C 0 1 N N N -34.989 30.799 -9.528  2.234  -1.455 -0.976 C12  JPD 14 
JPD C14  C12 C 0 1 N N N -35.934 32.761 -5.800  -1.709 -0.574 -0.311 C14  JPD 15 
JPD O15  O3  O 0 1 N N N -35.154 32.689 -4.903  -2.152 0.368  -0.939 O15  JPD 16 
JPD O16  O4  O 0 1 N N N -37.227 33.159 -5.570  -2.548 -1.483 0.220  O16  JPD 17 
JPD H132 H1  H 0 0 N N N -34.219 30.415 -7.519  1.699  -3.378 -0.168 H132 JPD 18 
JPD H131 H2  H 0 0 N N N -33.008 31.100 -8.656  0.644  -2.814 -1.485 H131 JPD 19 
JPD H171 H3  H 0 0 N N N -38.605 34.104 -4.376  -4.530 -2.078 0.482  H171 JPD 20 
JPD H172 H4  H 0 0 N N N -37.275 33.253 -3.519  -4.265 -0.318 0.431  H172 JPD 21 
JPD H173 H5  H 0 0 N N N -36.950 34.802 -4.370  -4.176 -1.275 -1.067 H173 JPD 22 
JPD H013 H6  H 0 0 N N N -40.284 34.382 -8.972  -2.445 3.730  0.495  H013 JPD 23 
JPD H011 H7  H 0 0 N N N -40.814 32.802 -8.301  -1.240 3.336  1.744  H011 JPD 24 
JPD H012 H8  H 0 0 N N N -39.915 33.962 -7.265  -0.736 4.162  0.250  H012 JPD 25 
JPD H021 H9  H 0 0 N N N -38.816 32.550 -9.754  -1.846 1.325  0.428  H021 JPD 26 
JPD H022 H10 H 0 0 N N N -37.916 33.710 -8.719  -1.343 2.150  -1.066 H022 JPD 27 
JPD H031 H11 H 0 0 N N N -38.675 30.856 -8.248  0.424  1.443  1.317  H031 JPD 28 
JPD H041 H12 H 0 0 N N N -38.265 31.196 -6.052  1.092  2.890  -1.110 H041 JPD 29 
JPD H051 H13 H 0 0 N N N -36.450 30.524 -7.677  0.494  0.552  -1.605 H051 JPD 30 
JPD H071 H14 H 0 0 N N N -33.595 32.890 -7.165  -0.552 -2.652 0.684  H071 JPD 31 
JPD H081 H15 H 0 0 N N N -33.611 33.064 -9.774  0.331  -1.104 2.425  H081 JPD 32 
JPD H082 H16 H 0 0 N N N -34.375 34.408 -8.860  1.519  -2.388 2.094  H082 JPD 33 
JPD H092 H17 H 0 0 N N N -35.668 33.137 -10.873 3.048  -0.824 1.550  H092 JPD 34 
JPD H091 H18 H 0 0 N N N -36.538 33.752 -9.427  1.856  0.458  1.862  H091 JPD 35 
JPD H111 H19 H 0 0 N N N -37.570 30.262 -9.990  3.861  0.563  -0.354 H111 JPD 36 
JPD H121 H20 H 0 0 N N N -35.262 29.734 -9.484  2.169  -1.252 -2.045 H121 JPD 37 
JPD H122 H21 H 0 0 N N N -34.460 31.004 -10.470 3.231  -1.827 -0.741 H122 JPD 38 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JPD O11 C10  SING N N 1  
JPD C09 C10  SING N N 2  
JPD C09 C08  SING N N 3  
JPD C12 C10  SING N N 4  
JPD C12 C13  SING N N 5  
JPD C10 C05  SING N N 6  
JPD C08 C07  SING N N 7  
JPD C02 C01  SING N N 8  
JPD C02 C03  SING N N 9  
JPD C13 C07  SING N N 10 
JPD C05 C03  SING N N 11 
JPD C05 N06  SING N N 12 
JPD C03 O04  SING N N 13 
JPD C07 N06  SING N N 14 
JPD N06 C14  SING N N 15 
JPD C14 O16  SING N N 16 
JPD C14 O15  DOUB N N 17 
JPD O16 C17  SING N N 18 
JPD C13 H132 SING N N 19 
JPD C13 H131 SING N N 20 
JPD C17 H171 SING N N 21 
JPD C17 H172 SING N N 22 
JPD C17 H173 SING N N 23 
JPD C01 H013 SING N N 24 
JPD C01 H011 SING N N 25 
JPD C01 H012 SING N N 26 
JPD C02 H021 SING N N 27 
JPD C02 H022 SING N N 28 
JPD C03 H031 SING N N 29 
JPD O04 H041 SING N N 30 
JPD C05 H051 SING N N 31 
JPD C07 H071 SING N N 32 
JPD C08 H081 SING N N 33 
JPD C08 H082 SING N N 34 
JPD C09 H092 SING N N 35 
JPD C09 H091 SING N N 36 
JPD O11 H111 SING N N 37 
JPD C12 H121 SING N N 38 
JPD C12 H122 SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JPD SMILES           ACDLabs              12.01 "C21(C(C(CC)O)N(C(OC)=O)C(CC1)CC2)O"                                                                                
JPD InChI            InChI                1.03  "InChI=1S/C12H21NO4/c1-3-9(14)10-12(16)6-4-8(5-7-12)13(10)11(15)17-2/h8-10,14,16H,3-7H2,1-2H3/t8-,9-,10-,12-/m0/s1" 
JPD InChIKey         InChI                1.03  VZRPKINLZWKPDQ-GMOBBJLQSA-N                                                                                         
JPD SMILES_CANONICAL CACTVS               3.385 "CC[C@H](O)[C@@H]1N(C2CCC1(O)CC2)C(=O)OC"                                                                           
JPD SMILES           CACTVS               3.385 "CC[CH](O)[CH]1N(C2CCC1(O)CC2)C(=O)OC"                                                                              
JPD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC[C@@H]([C@H]1C2(CCC(N1C(=O)OC)CC2)O)O"                                                                           
JPD SMILES           "OpenEye OEToolkits" 2.0.6 "CCC(C1C2(CCC(N1C(=O)OC)CC2)O)O"                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JPD "SYSTEMATIC NAME" ACDLabs              12.01 "methyl (1S,3S,4R)-4-hydroxy-3-[(1S)-1-hydroxypropyl]-2-azabicyclo[2.2.2]octane-2-carboxylate"   
JPD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "methyl (3~{S})-4-oxidanyl-3-[(1~{S})-1-oxidanylpropyl]-2-azabicyclo[2.2.2]octane-2-carboxylate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JPD "Create component" 2018-09-12 RCSB 
JPD "Initial release"  2018-10-10 RCSB 
# 
