data_LLD
#

_chem_comp.id                                   LLD
_chem_comp.name                                 "2-(pyridin-3-ylcarbonylamino)ethyl (2~{S})-1-(phenylmethyl)sulfonylpiperidine-2-carboxylate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H25 N3 O5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-01
_chem_comp.pdbx_modified_date                   2020-02-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       431.505
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LLD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6O4A
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LLD  C15  C1   C  0  1  Y  N  N  -62.923  -33.988  226.083  -5.877   0.684  -0.068  C15  LLD   1  
LLD  C17  C2   C  0  1  Y  N  N  -60.974  -33.682  227.450  -8.213   0.178  -0.067  C17  LLD   2  
LLD  C20  C3   C  0  1  Y  N  N  -62.350  -33.146  225.141  -5.699  -0.342   0.860  C20  LLD   3  
LLD  C24  C4   C  0  1  Y  N  N  -67.616  -32.385  222.382   4.475   1.019   0.707  C24  LLD   4  
LLD  C26  C5   C  0  1  Y  N  N  -67.557  -29.985  222.517   4.668   3.395   0.932  C26  LLD   5  
LLD  C28  C6   C  0  1  Y  N  N  -69.577  -31.118  221.866   6.582   2.091   0.325  C28  LLD   6  
LLD  C04  C7   C  0  1  N  N  N  -63.754  -34.925  221.715   2.618  -3.249  -0.947  C04  LLD   7  
LLD  C05  C8   C  0  1  N  N  N  -62.667  -35.827  221.118   2.456  -4.149   0.282  C05  LLD   8  
LLD  C06  C9   C  0  1  N  N  N  -63.052  -37.317  220.952   0.979  -4.201   0.680  C06  LLD   9  
LLD  C07  C10  C  0  1  N  N  N  -64.425  -37.461  220.282   0.498  -2.795   1.044  C07  LLD  10  
LLD  C08  C11  C  0  1  N  N  S  -65.524  -36.802  221.150   0.638  -1.879  -0.176  C08  LLD  11  
LLD  C09  C12  C  0  1  N  N  N  -65.663  -37.652  222.406   0.296  -0.464   0.213  C09  LLD  12  
LLD  C11  C13  C  0  1  N  N  N  -65.639  -37.559  224.852  -1.065   1.491   0.122  C11  LLD  13  
LLD  C12  C14  C  0  1  N  N  N  -65.748  -36.509  225.969  -2.342   1.991  -0.556  C12  LLD  14  
LLD  C14  C15  C  0  1  N  N  N  -64.269  -34.557  225.774  -4.723   1.474  -0.547  C14  LLD  15  
LLD  C16  C16  C  0  1  Y  N  N  -62.218  -34.262  227.264  -7.167   0.950  -0.543  C16  LLD  16  
LLD  C18  C17  C  0  1  Y  N  N  -60.480  -32.844  226.463  -7.953  -0.821   0.853  C18  LLD  17  
LLD  C23  C18  C  0  1  N  N  N  -66.918  -33.701  222.539   3.640  -0.235   0.767  C23  LLD  18  
LLD  C25  C19  C  0  1  Y  N  N  -66.933  -31.211  222.637   3.902   2.245   0.987  C25  LLD  19  
LLD  C27  C20  C  0  1  Y  N  N  -68.881  -29.941  222.117   6.007   3.318   0.599  C27  LLD  20  
LLD  C29  C21  C  0  1  Y  N  N  -68.944  -32.351  222.000   5.816   0.941   0.380  C29  LLD  21  
LLD  N03  N1   N  0  1  N  N  N  -65.156  -35.406  221.487   2.025  -1.936  -0.657  N03  LLD  22  
LLD  N13  N2   N  0  1  N  N  N  -64.473  -35.826  226.185  -3.486   1.209  -0.082  N13  LLD  23  
LLD  N19  N3   N  0  1  Y  N  N  -61.148  -32.593  225.337  -6.727  -1.049   1.283  N19  LLD  24  
LLD  O01  O1   O  0  1  N  N  N  -67.304  -34.971  220.074   1.933   0.441  -1.169  O01  LLD  25  
LLD  O10  O2   O  0  1  N  N  N  -65.605  -36.928  223.518  -0.797   0.126  -0.296  O10  LLD  26  
LLD  O21  O3   O  0  1  N  N  N  -65.152  -33.889  225.243  -4.889   2.363  -1.359  O21  LLD  27  
LLD  O22  O4   O  0  1  N  N  N  -65.826  -38.839  222.420   1.005   0.140   0.983  O22  LLD  28  
LLD  O30  O5   O  0  1  N  N  N  -65.415  -33.065  220.226   3.909  -0.906  -1.802  O30  LLD  29  
LLD  S02  S1   S  0  1  N  N  N  -66.249  -34.200  220.907   2.905  -0.549  -0.862  S02  LLD  30  
LLD  H1   H1   H  0  1  N  N  N  -60.402  -33.879  228.345  -9.222   0.355  -0.411  H1   LLD  31  
LLD  H2   H2   H  0  1  N  N  N  -62.887  -32.932  224.229  -4.710  -0.559   1.235  H2   LLD  32  
LLD  H3   H3   H  0  1  N  N  N  -67.019  -29.073  222.732   4.219   4.353   1.150  H3   LLD  33  
LLD  H4   H4   H  0  1  N  N  N  -70.614  -31.076  221.566   7.629   2.030   0.070  H4   LLD  34  
LLD  H5   H5   H  0  1  N  N  N  -63.586  -34.857  222.800   3.677  -3.129  -1.175  H5   LLD  35  
LLD  H6   H6   H  0  1  N  N  N  -63.656  -33.926  221.266   2.109  -3.699  -1.800  H6   LLD  36  
LLD  H7   H7   H  0  1  N  N  N  -61.786  -35.776  221.775   2.804  -5.155   0.044  H7   LLD  37  
LLD  H8   H8   H  0  1  N  N  N  -62.407  -35.432  220.125   3.042  -3.747   1.107  H8   LLD  38  
LLD  H9   H9   H  0  1  N  N  N  -63.084  -37.792  221.943   0.391  -4.581  -0.155  H9   LLD  39  
LLD  H10  H10  H  0  1  N  N  N  -62.295  -37.817  220.330   0.858  -4.860   1.539  H10  LLD  40  
LLD  H11  H11  H  0  1  N  N  N  -64.400  -36.972  219.297  -0.548  -2.836   1.350  H11  LLD  41  
LLD  H12  H12  H  0  1  N  N  N  -64.656  -38.529  220.155   1.102  -2.405   1.863  H12  LLD  42  
LLD  H13  H13  H  0  1  N  N  N  -66.474  -36.815  220.595  -0.035  -2.216  -0.965  H13  LLD  43  
LLD  H14  H14  H  0  1  N  N  N  -66.508  -38.231  224.907  -0.228   2.129  -0.162  H14  LLD  44  
LLD  H15  H15  H  0  1  N  N  N  -64.716  -38.140  224.996  -1.193   1.520   1.204  H15  LLD  45  
LLD  H16  H16  H  0  1  N  N  N  -66.509  -35.766  225.689  -2.494   3.043  -0.313  H16  LLD  46  
LLD  H17  H17  H  0  1  N  N  N  -66.049  -37.008  226.902  -2.247   1.878  -1.636  H17  LLD  47  
LLD  H18  H18  H  0  1  N  N  N  -62.638  -34.914  228.016  -7.342   1.737  -1.261  H18  LLD  48  
LLD  H19  H19  H  0  1  N  N  N  -59.518  -32.377  226.612  -8.767  -1.425   1.226  H19  LLD  49  
LLD  H20  H20  H  0  1  N  N  N  -67.631  -34.459  222.896   4.270  -1.078   1.050  H20  LLD  50  
LLD  H21  H21  H  0  1  N  N  N  -66.096  -33.601  223.263   2.848  -0.109   1.505  H21  LLD  51  
LLD  H22  H22  H  0  1  N  N  N  -65.896  -31.253  222.935   2.855   2.305   1.247  H22  LLD  52  
LLD  H23  H23  H  0  1  N  N  N  -69.376  -28.988  221.999   6.605   4.216   0.557  H23  LLD  53  
LLD  H24  H24  H  0  1  N  N  N  -69.483  -33.267  221.808   6.265  -0.018   0.166  H24  LLD  54  
LLD  H25  H25  H  0  1  N  N  N  -63.733  -36.312  226.650  -3.353   0.500   0.567  H25  LLD  55  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LLD  O01  S02  DOUB  N  N   1  
LLD  O30  S02  DOUB  N  N   2  
LLD  C07  C06  SING  N  N   3  
LLD  C07  C08  SING  N  N   4  
LLD  S02  N03  SING  N  N   5  
LLD  S02  C23  SING  N  N   6  
LLD  C06  C05  SING  N  N   7  
LLD  C05  C04  SING  N  N   8  
LLD  C08  N03  SING  N  N   9  
LLD  C08  C09  SING  N  N  10  
LLD  N03  C04  SING  N  N  11  
LLD  C28  C29  DOUB  Y  N  12  
LLD  C28  C27  SING  Y  N  13  
LLD  C29  C24  SING  Y  N  14  
LLD  C27  C26  DOUB  Y  N  15  
LLD  C24  C23  SING  N  N  16  
LLD  C24  C25  DOUB  Y  N  17  
LLD  C09  O22  DOUB  N  N  18  
LLD  C09  O10  SING  N  N  19  
LLD  C26  C25  SING  Y  N  20  
LLD  O10  C11  SING  N  N  21  
LLD  C11  C12  SING  N  N  22  
LLD  C20  N19  DOUB  Y  N  23  
LLD  C20  C15  SING  Y  N  24  
LLD  O21  C14  DOUB  N  N  25  
LLD  N19  C18  SING  Y  N  26  
LLD  C14  C15  SING  N  N  27  
LLD  C14  N13  SING  N  N  28  
LLD  C12  N13  SING  N  N  29  
LLD  C15  C16  DOUB  Y  N  30  
LLD  C18  C17  DOUB  Y  N  31  
LLD  C16  C17  SING  Y  N  32  
LLD  C17  H1   SING  N  N  33  
LLD  C20  H2   SING  N  N  34  
LLD  C26  H3   SING  N  N  35  
LLD  C28  H4   SING  N  N  36  
LLD  C04  H5   SING  N  N  37  
LLD  C04  H6   SING  N  N  38  
LLD  C05  H7   SING  N  N  39  
LLD  C05  H8   SING  N  N  40  
LLD  C06  H9   SING  N  N  41  
LLD  C06  H10  SING  N  N  42  
LLD  C07  H11  SING  N  N  43  
LLD  C07  H12  SING  N  N  44  
LLD  C08  H13  SING  N  N  45  
LLD  C11  H14  SING  N  N  46  
LLD  C11  H15  SING  N  N  47  
LLD  C12  H16  SING  N  N  48  
LLD  C12  H17  SING  N  N  49  
LLD  C16  H18  SING  N  N  50  
LLD  C18  H19  SING  N  N  51  
LLD  C23  H20  SING  N  N  52  
LLD  C23  H21  SING  N  N  53  
LLD  C25  H22  SING  N  N  54  
LLD  C27  H23  SING  N  N  55  
LLD  C29  H24  SING  N  N  56  
LLD  N13  H25  SING  N  N  57  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LLD  InChI             InChI                 1.03   "InChI=1S/C21H25N3O5S/c25-20(18-9-6-11-22-15-18)23-12-14-29-21(26)19-10-4-5-13-24(19)30(27,28)16-17-7-2-1-3-8-17/h1-3,6-9,11,15,19H,4-5,10,12-14,16H2,(H,23,25)/t19-/m0/s1"  
LLD  InChIKey          InChI                 1.03   YBYJEZJXJIOQAP-IBGZPJMESA-N  
LLD  SMILES_CANONICAL  CACTVS                3.385  "O=C(NCCOC(=O)[C@@H]1CCCCN1[S](=O)(=O)Cc2ccccc2)c3cccnc3"  
LLD  SMILES            CACTVS                3.385  "O=C(NCCOC(=O)[CH]1CCCCN1[S](=O)(=O)Cc2ccccc2)c3cccnc3"  
LLD  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)CS(=O)(=O)N2CCCC[C@H]2C(=O)OCCNC(=O)c3cccnc3"  
LLD  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)CS(=O)(=O)N2CCCCC2C(=O)OCCNC(=O)c3cccnc3"  
#
_pdbx_chem_comp_identifier.comp_id          LLD
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "2-(pyridin-3-ylcarbonylamino)ethyl (2~{S})-1-(phenylmethyl)sulfonylpiperidine-2-carboxylate"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LLD  "Create component"  2019-03-01  RCSB  
LLD  "Initial release"   2020-02-12  RCSB  
##
