data_NWD
#

_chem_comp.id                                   NWD
_chem_comp.name                                 "3-(5-nitro-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-L-alanine"
_chem_comp.type                                 "L-peptide linking"
_chem_comp.pdbx_type                            ATOMP
_chem_comp.formula                              "C7 H8 N4 O6"
_chem_comp.mon_nstd_parent_comp_id              ALA
_chem_comp.pdbx_synonyms                        nitrowillardiine
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2011-05-05
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       244.162
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    NWD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3RTW
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NWD  N1    N1    N   0  1  N  N  N  18.318  12.078  -26.815  -0.203  -0.228  -0.516  N1    NWD   1  
NWD  O1    O1    O   0  1  N  N  N  15.747  12.287  -23.257   2.831   2.551  -0.035  O1    NWD   2  
NWD  C2    C2    C   0  1  N  N  N  17.710  12.280  -28.061   0.092  -1.533  -0.381  C2    NWD   3  
NWD  N2    N2    N   1  1  N  N  N  15.353  11.817  -24.517   3.095   1.368   0.086  N2    NWD   4  
NWD  O2    O2    O   0  1  N  N  N  18.486  12.382  -29.222  -0.786  -2.364  -0.518  O2    NWD   5  
NWD  N3    N3    N   0  1  N  N  N  16.286  12.362  -28.156   1.345  -1.934  -0.096  N3    NWD   6  
NWD  O3    O3    O  -1  1  N  N  N  14.264  10.959  -24.595   4.234   1.022   0.344  O3    NWD   7  
NWD  C4    C4    C   0  1  N  N  N  15.523  12.220  -27.022   2.329  -1.026   0.059  C4    NWD   8  
NWD  O4    O4    O   0  1  N  N  N  14.093  12.253  -27.132   3.464  -1.387   0.317  O4    NWD   9  
NWD  C5    C5    C   0  1  N  N  N  16.155  12.003  -25.708   2.033   0.352  -0.080  C5    NWD  10  
NWD  C6    C6    C   0  1  N  N  N  17.518  11.916  -25.611   0.767   0.725  -0.366  C6    NWD  11  
NWD  C7    C7    C   0  1  N  N  N  19.794  11.932  -26.705  -1.575   0.177  -0.832  C7    NWD  12  
NWD  C8    C8    C   0  1  N  N  S  20.238  10.447  -26.995  -2.355   0.396   0.466  C8    NWD  13  
NWD  N8    N8    N   0  1  N  N  N  19.869   9.498  -25.939  -2.278  -0.816   1.293  N8    NWD  14  
NWD  C9    C9    C   0  1  N  N  N  21.718  10.381  -27.417  -3.797   0.692   0.142  C9    NWD  15  
NWD  O91   O91   O   0  1  N  N  N  22.493   9.994  -26.607  -4.627  -0.181   0.229  O91   NWD  16  
NWD  O92   O92   O   0  1  N  N  N  22.115  11.405  -28.340  -4.158   1.926  -0.243  O92   NWD  17  
NWD  HN3   HN3   H   0  1  N  N  N  15.848  12.521  -29.041   1.540  -2.879  -0.002  HN3   NWD  18  
NWD  H6    H6    H   0  1  N  N  N  17.991  11.730  -24.658   0.522   1.771  -0.476  H6    NWD  19  
NWD  H7    H7    H   0  1  N  N  N  20.275  12.598  -27.437  -1.557   1.104  -1.406  H7    NWD  20  
NWD  H7A   H7A   H   0  1  N  N  N  20.105  12.206  -25.686  -2.058  -0.604  -1.419  H7A   NWD  21  
NWD  H8    H8    H   0  1  N  N  N  19.651  10.101  -27.859  -1.925   1.236   1.011  H8    NWD  22  
NWD  HN8   HN8   H   0  1  N  N  N  20.181   8.582  -26.190  -2.671  -1.610   0.809  HN8   NWD  23  
NWD  HN8A  HN8A  H   0  0  N  N  N  20.299   9.773  -25.079  -1.327  -1.000   1.577  HN8A  NWD  24  
NWD  H81   H81   H   0  1  N  N  N  23.015  11.657  -28.167  -5.094   2.068  -0.440  H81   NWD  25  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NWD  N1   C2    SING  N  N   1  
NWD  N1   C6    SING  N  N   2  
NWD  N1   C7    SING  N  N   3  
NWD  O1   N2    DOUB  N  N   4  
NWD  C2   O2    DOUB  N  N   5  
NWD  C2   N3    SING  N  N   6  
NWD  N2   O3    SING  N  N   7  
NWD  N2   C5    SING  N  N   8  
NWD  N3   C4    SING  N  N   9  
NWD  N3   HN3   SING  N  N  10  
NWD  C4   O4    DOUB  N  N  11  
NWD  C4   C5    SING  N  N  12  
NWD  C5   C6    DOUB  N  N  13  
NWD  C6   H6    SING  N  N  14  
NWD  C7   C8    SING  N  N  15  
NWD  C7   H7    SING  N  N  16  
NWD  C7   H7A   SING  N  N  17  
NWD  C8   N8    SING  N  N  18  
NWD  C8   C9    SING  N  N  19  
NWD  C8   H8    SING  N  N  20  
NWD  N8   HN8   SING  N  N  21  
NWD  N8   HN8A  SING  N  N  22  
NWD  C9   O91   DOUB  N  N  23  
NWD  C9   O92   SING  N  N  24  
NWD  O92  H81   SING  N  N  25  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NWD  SMILES            ACDLabs               12.01  "O=C(O)C(N)CN1C=C(C(=O)NC1=O)[N+]([O-])=O"  
NWD  SMILES_CANONICAL  CACTVS                3.370  "N[C@@H](CN1C=C(C(=O)NC1=O)[N+]([O-])=O)C(O)=O"  
NWD  SMILES            CACTVS                3.370  "N[CH](CN1C=C(C(=O)NC1=O)[N+]([O-])=O)C(O)=O"  
NWD  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.2  "C1=C(C(=O)NC(=O)N1C[C@@H](C(=O)O)N)[N+](=O)[O-]"  
NWD  SMILES            "OpenEye OEToolkits"  1.7.2  "C1=C(C(=O)NC(=O)N1CC(C(=O)O)N)[N+](=O)[O-]"  
NWD  InChI             InChI                 1.03   "InChI=1S/C7H8N4O6/c8-3(6(13)14)1-10-2-4(11(16)17)5(12)9-7(10)15/h2-3H,1,8H2,(H,13,14)(H,9,12,15)/t3-/m0/s1"  
NWD  InChIKey          InChI                 1.03   IEBVITXSHAFLJR-VKHMYHEASA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NWD  "SYSTEMATIC NAME"  ACDLabs               12.01  "3-(5-nitro-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-L-alanine"  
NWD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.2  "(2S)-2-azanyl-3-[5-nitro-2,4-bis(oxidanylidene)pyrimidin-1-yl]propanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NWD  "Create component"   2011-05-05  RCSB  
NWD  "Modify descriptor"  2011-06-04  RCSB  
NWD  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     NWD
_pdbx_chem_comp_synonyms.name        nitrowillardiine
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
