data_P9D
# 
_chem_comp.id                                    P9D 
_chem_comp.name                                  "[{2-[({[(3R)-1-{8-[(4-tert-butyl-1,3-thiazol-2-yl)carbamoyl]-4-oxo-3-[(E)-2-(1H-tetrazol-5-yl)ethenyl]-4H-pyrido[1,2-a]pyrimidin-2-yl}piperidin-3-yl]oxy}carbonyl)amino]ethyl}(dimethyl)ammonio]acetate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H39 N11 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-01-06 
_chem_comp.pdbx_modified_date                    2013-06-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        693.776 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     P9D 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3VMU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
P9D C1   C1   C 0  1 N N N -59.006 30.897 -42.959 10.017  -4.856 -1.867 C1   P9D 1  
P9D C2   C2   C 0  1 N N N -58.777 32.059 -43.902 10.078  -3.862 -0.705 C2   P9D 2  
P9D C3   C3   C 0  1 N N N -59.141 31.627 -45.320 10.759  -2.573 -1.172 C3   P9D 3  
P9D C4   C4   C 0  1 Y N N -57.346 32.459 -43.765 8.681   -3.549 -0.236 C4   P9D 4  
P9D C5   C5   C 0  1 N N N -59.613 33.252 -43.477 10.878  -4.472 0.447  C5   P9D 5  
P9D N6   N6   N 0  1 Y N N -56.374 31.818 -44.463 8.074   -2.410 -0.510 N6   P9D 6  
P9D C7   C7   C 0  1 Y N N -55.218 32.410 -44.102 6.871   -2.260 -0.050 C7   P9D 7  
P9D S8   S8   S 0  1 Y N N -55.380 33.607 -43.017 6.397   -3.653 0.820  S8   P9D 8  
P9D C9   C9   C 0  1 Y N N -57.010 33.484 -42.883 7.954   -4.406 0.485  C9   P9D 9  
P9D N10  N10  N 0  1 N N N -54.031 32.050 -44.597 6.083   -1.132 -0.237 N10  P9D 10 
P9D C11  C11  C 0  1 N N N -53.056 32.922 -44.800 4.842   -1.083 0.286  C11  P9D 11 
P9D C12  C12  C 0  1 N N N -51.915 32.377 -45.579 4.001   0.120  0.086  C12  P9D 12 
P9D O13  O13  O 0  1 N N N -53.032 34.074 -44.382 4.413   -2.025 0.922  O13  P9D 13 
P9D C14  C14  C 0  1 N N N -52.175 31.327 -46.469 2.726   0.180  0.620  C14  P9D 14 
P9D C15  C15  C 0  1 N N N -51.135 30.786 -47.196 1.947   1.336  0.416  C15  P9D 15 
P9D N16  N16  N 0  1 N N N -49.795 31.331 -46.982 2.460   2.378  -0.305 N16  P9D 16 
P9D C17  C17  C 0  1 N N N -49.564 32.414 -46.053 3.718   2.312  -0.830 C17  P9D 17 
P9D C18  C18  C 0  1 N N N -50.645 32.917 -45.356 4.493   1.223  -0.647 C18  P9D 18 
P9D N19  N19  N 0  1 N N N -51.377 29.779 -48.083 0.721   1.388  0.932  N19  P9D 19 
P9D C20  C20  C 0  1 N N N -48.680 30.791 -47.725 1.721   3.492  -0.508 C20  P9D 20 
P9D C21  C21  C 0  1 N N N -50.382 29.195 -48.832 -0.057  2.450  0.771  C21  P9D 21 
P9D C22  C22  C 0  1 N N N -48.963 29.677 -48.692 0.419   3.557  0.037  C22  P9D 22 
P9D O23  O23  O 0  1 N N N -47.537 31.266 -47.543 2.172   4.426  -1.150 O23  P9D 23 
P9D N24  N24  N 0  1 N N N -50.683 28.146 -49.728 -1.323  2.473  1.318  N24  P9D 24 
P9D C25  C25  C 0  1 N N N -47.861 29.075 -49.481 -0.416  4.744  -0.157 C25  P9D 25 
P9D C26  C26  C 0  1 N N N -46.662 29.164 -48.932 0.006   5.743  -0.962 C26  P9D 26 
P9D C27  C27  C 0  1 Y N N -45.406 28.645 -49.516 -0.755  6.992  -1.041 C27  P9D 27 
P9D N28  N28  N 0  1 Y N N -45.310 27.422 -50.041 -1.866  7.281  -0.385 N28  P9D 28 
P9D N29  N29  N 0  1 Y N N -43.969 27.333 -50.438 -2.271  8.462  -0.686 N29  P9D 29 
P9D N30  N30  N 0  1 Y N N -43.336 28.555 -50.109 -1.474  9.012  -1.536 N30  P9D 30 
P9D N31  N31  N 0  1 Y N N -44.284 29.387 -49.498 -0.451  8.086  -1.801 N31  P9D 31 
P9D C32  C32  C 0  1 N N N -51.263 26.888 -49.200 -2.492  2.083  0.517  C32  P9D 32 
P9D C33  C33  C 0  1 N N R -50.785 25.627 -49.940 -3.266  0.997  1.270  C33  P9D 33 
P9D O34  O34  O 0  1 N N N -50.209 24.592 -49.090 -4.491  0.690  0.555  O34  P9D 34 
P9D C35  C35  C 0  1 N N N -49.842 26.024 -51.063 -3.606  1.499  2.675  C35  P9D 35 
P9D C36  C36  C 0  1 N N N -50.480 27.109 -51.906 -2.313  1.791  3.441  C36  P9D 36 
P9D C37  C37  C 0  1 N N N -50.418 28.415 -51.142 -1.528  2.881  2.714  C37  P9D 37 
P9D C38  C38  C 0  1 N N N -48.771 24.623 -48.719 -4.965  -0.565 0.664  C38  P9D 38 
P9D N39  N39  N 0  1 N N N -47.849 23.835 -49.320 -6.099  -0.915 0.025  N39  P9D 39 
P9D C40  C40  C 0  1 N N N -46.748 24.329 -50.142 -6.615  -2.281 0.143  C40  P9D 40 
P9D C41  C41  C 0  1 N N N -46.482 23.473 -51.393 -7.903  -2.413 -0.673 C41  P9D 41 
P9D N42  N42  N 1  1 N N N -46.479 24.149 -52.734 -8.420  -3.782 -0.554 N42  P9D 42 
P9D C43  C43  C 0  1 N N N -47.799 24.765 -53.045 -9.656  -3.909 -1.337 C43  P9D 43 
P9D O44  O44  O 0  1 N N N -48.458 25.367 -47.810 -4.371  -1.383 1.338  O44  P9D 44 
P9D C45  C45  C 0  1 N N N -48.955 23.958 -53.666 -10.163 -5.325 -1.252 C45  P9D 45 
P9D O46  O46  O -1 1 N N N -49.207 22.756 -53.351 -9.615  -6.125 -0.512 O46  P9D 46 
P9D O47  O47  O 0  1 N N N -49.668 24.583 -54.497 -11.120 -5.672 -1.923 O47  P9D 47 
P9D C48  C48  C 0  1 N N N -45.455 25.210 -52.793 -7.419  -4.729 -1.063 C48  P9D 48 
P9D C49  C49  C 0  1 N N N -46.078 23.176 -53.773 -8.702  -4.079 0.857  C49  P9D 49 
P9D H1   H1   H 0  1 N N N -58.746 31.199 -41.934 11.028  -5.081 -2.206 H1   P9D 50 
P9D H1A  H1A  H 0  1 N N N -60.064 30.598 -42.996 9.532   -5.773 -1.534 H1A  P9D 51 
P9D H1B  H1B  H 0  1 N N N -58.375 30.049 -43.262 9.447   -4.420 -2.688 H1B  P9D 52 
P9D H3   H3   H 0  1 N N N -58.978 32.466 -46.013 10.189  -2.138 -1.993 H3   P9D 53 
P9D H3A  H3A  H 0  1 N N N -58.509 30.777 -45.618 10.803  -1.865 -0.344 H3A  P9D 54 
P9D H3B  H3B  H 0  1 N N N -60.199 31.326 -45.351 11.770  -2.799 -1.511 H3B  P9D 55 
P9D H5   H5   H 0  1 N N N -59.438 34.089 -44.169 11.889  -4.698 0.108  H5   P9D 56 
P9D H5A  H5A  H 0  1 N N N -60.678 32.978 -43.495 10.922  -3.764 1.275  H5A  P9D 57 
P9D H5B  H5B  H 0  1 N N N -59.329 33.554 -42.458 10.394  -5.390 0.780  H5B  P9D 58 
P9D H9   H9   H 0  1 N N N -57.671 34.064 -42.256 8.266   -5.388 0.807  H9   P9D 59 
P9D HN10 HN10 H 0  0 N N N -53.873 31.088 -44.822 6.425   -0.380 -0.745 HN10 P9D 60 
P9D H14  H14  H 0  1 N N N -53.179 30.945 -46.585 2.332   -0.650 1.188  H14  P9D 61 
P9D H17  H17  H 0  1 N N N -48.573 32.819 -45.908 4.102   3.148  -1.396 H17  P9D 62 
P9D H18  H18  H 0  1 N N N -50.511 33.719 -44.646 5.489   1.193  -1.065 H18  P9D 63 
P9D H25  H25  H 0  1 N N N -48.026 28.598 -50.436 -1.370  4.821  0.344  H25  P9D 64 
P9D H26  H26  H 0  1 N N N -46.593 29.658 -47.974 0.905   5.621  -1.548 H26  P9D 65 
P9D HN31 HN31 H 0  0 N N N -44.157 30.310 -49.136 0.307   8.198  -2.396 HN31 P9D 66 
P9D H32  H32  H 0  1 N N N -50.984 26.795 -48.140 -3.135  2.950  0.363  H32  P9D 67 
P9D H32A H32A H 0  0 N N N -52.358 26.947 -49.287 -2.161  1.695  -0.447 H32A P9D 68 
P9D H33  H33  H 0  1 N N N -51.676 25.195 -50.419 -2.653  0.098  1.343  H33  P9D 69 
P9D H35  H35  H 0  1 N N N -48.901 26.400 -50.635 -4.198  2.411  2.601  H35  P9D 70 
P9D H35A H35A H 0  0 N N N -49.634 25.147 -51.693 -4.178  0.738  3.205  H35A P9D 71 
P9D H36  H36  H 0  1 N N N -49.934 27.209 -52.856 -2.556  2.127  4.449  H36  P9D 72 
P9D H36A H36A H 0  0 N N N -51.529 26.850 -52.112 -1.710  0.885  3.494  H36A P9D 73 
P9D H37  H37  H 0  1 N N N -51.175 29.110 -51.535 -0.562  3.019  3.200  H37  P9D 74 
P9D H37A H37A H 0  0 N N N -49.419 28.861 -51.253 -2.091  3.814  2.743  H37A P9D 75 
P9D HN39 HN39 H 0  0 N N N -47.927 22.846 -49.192 -6.574  -0.262 -0.513 HN39 P9D 76 
P9D H40  H40  H 0  1 N N N -46.987 25.353 -50.465 -5.872  -2.984 -0.235 H40  P9D 77 
P9D H40A H40A H 0  0 N N N -45.835 24.342 -49.529 -6.824  -2.501 1.190  H40A P9D 78 
P9D H41  H41  H 0  1 N N N -45.495 23.005 -51.263 -8.646  -1.710 -0.295 H41  P9D 79 
P9D H41A H41A H 0  0 N N N -47.257 22.693 -51.424 -7.694  -2.193 -1.720 H41A P9D 80 
P9D H43  H43  H 0  1 N N N -48.181 25.168 -52.095 -10.410 -3.229 -0.939 H43  P9D 81 
P9D H43A H43A H 0  0 N N N -47.595 25.594 -53.739 -9.454  -3.657 -2.378 H43A P9D 82 
P9D H48  H48  H 0  1 N N N -45.476 25.686 -53.784 -6.533  -4.698 -0.429 H48  P9D 83 
P9D H48A H48A H 0  0 N N N -45.663 25.964 -52.020 -7.835  -5.737 -1.056 H48A P9D 84 
P9D H48B H48B H 0  0 N N N -44.462 24.771 -52.619 -7.146  -4.457 -2.082 H48B P9D 85 
P9D H49  H49  H 0  1 N N N -46.075 23.669 -54.756 -9.510  -3.438 1.208  H49  P9D 86 
P9D H49A H49A H 0  0 N N N -45.070 22.797 -53.550 -8.996  -5.123 0.957  H49A P9D 87 
P9D H49B H49B H 0  0 N N N -46.791 22.338 -53.785 -7.807  -3.895 1.452  H49B P9D 88 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
P9D C1  C2   SING N N 1  
P9D C2  C3   SING N N 2  
P9D C2  C4   SING N N 3  
P9D C2  C5   SING N N 4  
P9D C4  N6   SING Y N 5  
P9D C4  C9   DOUB Y N 6  
P9D N6  C7   DOUB Y N 7  
P9D C7  S8   SING Y N 8  
P9D C7  N10  SING N N 9  
P9D S8  C9   SING Y N 10 
P9D N10 C11  SING N N 11 
P9D C11 C12  SING N N 12 
P9D C11 O13  DOUB N N 13 
P9D C12 C14  DOUB N N 14 
P9D C12 C18  SING N N 15 
P9D C14 C15  SING N N 16 
P9D C15 N16  SING N N 17 
P9D C15 N19  DOUB N N 18 
P9D N16 C17  SING N N 19 
P9D N16 C20  SING N N 20 
P9D C17 C18  DOUB N N 21 
P9D N19 C21  SING N N 22 
P9D C20 C22  SING N N 23 
P9D C20 O23  DOUB N N 24 
P9D C21 C22  DOUB N N 25 
P9D C21 N24  SING N N 26 
P9D C22 C25  SING N N 27 
P9D N24 C32  SING N N 28 
P9D N24 C37  SING N N 29 
P9D C25 C26  DOUB N E 30 
P9D C26 C27  SING N N 31 
P9D C27 N28  DOUB Y N 32 
P9D C27 N31  SING Y N 33 
P9D N28 N29  SING Y N 34 
P9D N29 N30  DOUB Y N 35 
P9D N30 N31  SING Y N 36 
P9D C32 C33  SING N N 37 
P9D C33 O34  SING N N 38 
P9D C33 C35  SING N N 39 
P9D O34 C38  SING N N 40 
P9D C35 C36  SING N N 41 
P9D C36 C37  SING N N 42 
P9D C38 N39  SING N N 43 
P9D C38 O44  DOUB N N 44 
P9D N39 C40  SING N N 45 
P9D C40 C41  SING N N 46 
P9D C41 N42  SING N N 47 
P9D N42 C43  SING N N 48 
P9D N42 C48  SING N N 49 
P9D N42 C49  SING N N 50 
P9D C43 C45  SING N N 51 
P9D C45 O46  SING N N 52 
P9D C45 O47  DOUB N N 53 
P9D C1  H1   SING N N 54 
P9D C1  H1A  SING N N 55 
P9D C1  H1B  SING N N 56 
P9D C3  H3   SING N N 57 
P9D C3  H3A  SING N N 58 
P9D C3  H3B  SING N N 59 
P9D C5  H5   SING N N 60 
P9D C5  H5A  SING N N 61 
P9D C5  H5B  SING N N 62 
P9D C9  H9   SING N N 63 
P9D N10 HN10 SING N N 64 
P9D C14 H14  SING N N 65 
P9D C17 H17  SING N N 66 
P9D C18 H18  SING N N 67 
P9D C25 H25  SING N N 68 
P9D C26 H26  SING N N 69 
P9D N31 HN31 SING N N 70 
P9D C32 H32  SING N N 71 
P9D C32 H32A SING N N 72 
P9D C33 H33  SING N N 73 
P9D C35 H35  SING N N 74 
P9D C35 H35A SING N N 75 
P9D C36 H36  SING N N 76 
P9D C36 H36A SING N N 77 
P9D C37 H37  SING N N 78 
P9D C37 H37A SING N N 79 
P9D N39 HN39 SING N N 80 
P9D C40 H40  SING N N 81 
P9D C40 H40A SING N N 82 
P9D C41 H41  SING N N 83 
P9D C41 H41A SING N N 84 
P9D C43 H43  SING N N 85 
P9D C43 H43A SING N N 86 
P9D C48 H48  SING N N 87 
P9D C48 H48A SING N N 88 
P9D C48 H48B SING N N 89 
P9D C49 H49  SING N N 90 
P9D C49 H49A SING N N 91 
P9D C49 H49B SING N N 92 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
P9D SMILES           ACDLabs              12.01 "O=C(Nc1nc(cs1)C(C)(C)C)C5=CC4=NC(N2CCCC(OC(=O)NCC[N+](CC([O-])=O)(C)C)C2)=C(\C=C\c3nnnn3)C(=O)N4C=C5" 
P9D InChI            InChI                1.03  
;InChI=1S/C31H39N11O6S/c1-31(2,3)22-18-49-29(33-22)35-27(45)19-10-13-41-24(15-19)34-26(21(28(41)46)8-9-23-36-38-39-37-23)40-12-6-7-20(16-40)48-30(47)32-11-14-42(4,5)17-25(43)44/h8-10,13,15,18,20H,6-7,11-12,14,16-17H2,1-5H3,(H3-,32,33,35,36,37,38,39,43,44,45,47)/t20-/m1/s1
;
P9D InChIKey         InChI                1.03  RVJNIKFVEAWLQC-HXUWFJFHSA-N 
P9D SMILES_CANONICAL CACTVS               3.370 "CC(C)(C)c1csc(NC(=O)C2=CC3=NC(=C(\C=C\c4[nH]nnn4)C(=O)N3C=C2)N5CCC[C@H](C5)OC(=O)NCC[N+](C)(C)CC([O-])=O)n1" 
P9D SMILES           CACTVS               3.370 "CC(C)(C)c1csc(NC(=O)C2=CC3=NC(=C(C=Cc4[nH]nnn4)C(=O)N3C=C2)N5CCC[CH](C5)OC(=O)NCC[N+](C)(C)CC([O-])=O)n1" 
P9D SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)(C)c1csc(n1)NC(=O)C2=CC3=NC(=C(C(=O)N3C=C2)/C=C/c4[nH]nnn4)N5CCC[C@H](C5)OC(=O)NCC[N+](C)(C)CC(=O)[O-]" 
P9D SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C)(C)c1csc(n1)NC(=O)C2=CC3=NC(=C(C(=O)N3C=C2)C=Cc4[nH]nnn4)N5CCCC(C5)OC(=O)NCC[N+](C)(C)CC(=O)[O-]" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
P9D "SYSTEMATIC NAME" ACDLabs              12.01 "[{2-[({[(3R)-1-{8-[(4-tert-butyl-1,3-thiazol-2-yl)carbamoyl]-4-oxo-3-[(E)-2-(1H-tetrazol-5-yl)ethenyl]-4H-pyrido[1,2-a]pyrimidin-2-yl}piperidin-3-yl]oxy}carbonyl)amino]ethyl}(dimethyl)ammonio]acetate" 
P9D "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 
"2-[2-[[(3R)-1-[8-[(4-tert-butyl-1,3-thiazol-2-yl)carbamoyl]-4-oxidanylidene-3-[(E)-2-(1H-1,2,3,4-tetrazol-5-yl)ethenyl]pyrido[1,2-a]pyrimidin-2-yl]piperidin-3-yl]oxycarbonylamino]ethyl-dimethyl-azaniumyl]ethanoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
P9D "Create component" 2012-01-06 PDBJ 
P9D "Initial release"  2013-07-03 RCSB 
# 
