data_POD
#

_chem_comp.id                                   POD
_chem_comp.name                                 "9-HYDROXY-5-(3,4,5-TRIMETHOXYPHENYL)-5,8,8A,9-TETRAHYDROFURO[3',4':6,7]NAPHTHO[2,3-D][1,3]DIOXOL-6(5AH)-ONE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H22 O8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        PODOPHYLLOTOXIN
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-03-04
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       414.405
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    POD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1SA1
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
POD  O5    O5    O  0  1  N  N  N  115.817  88.087   9.521  -2.614  -1.787   2.116  O5    POD   1  
POD  C13   C13   C  0  1  N  N  N  116.759  88.776   9.288  -2.808  -0.884   1.336  C13   POD   2  
POD  O4    O4    O  0  1  N  N  N  117.856  89.097  10.154  -3.582   0.216   1.564  O4    POD   3  
POD  C10   C10   C  0  1  N  N  R  116.860  89.602   8.132  -2.226  -0.754  -0.039  C10   POD   4  
POD  C9    C9    C  0  1  N  N  R  118.162  90.326   8.185  -2.194   0.793  -0.246  C9    POD   5  
POD  C12   C12   C  0  1  N  N  N  118.758  90.063   9.574  -3.535   1.137   0.420  C12   POD   6  
POD  C11   C11   C  0  1  N  N  R  115.834  89.541   7.111  -0.800  -1.232  -0.224  C11   POD   7  
POD  C5    C5    C  0  1  Y  N  N  116.034  90.758   6.281  -0.324  -0.766  -1.589  C5    POD   8  
POD  C6    C6    C  0  1  Y  N  N  117.120  91.593   6.378  -0.926   0.247  -2.276  C6    POD   9  
POD  C8    C8    C  0  1  N  N  R  118.301  91.595   7.350  -2.132   1.003  -1.747  C8    POD  10  
POD  O3    O3    O  0  1  N  N  N  119.602  91.654   6.717  -1.994   2.397  -2.034  O3    POD  11  
POD  C7    C7    C  0  1  Y  N  N  116.936  92.433   5.495  -0.462   0.637  -3.534  C7    POD  12  
POD  C2    C2    C  0  1  Y  N  N  116.246  92.860   4.588   0.642  -0.017  -4.051  C2    POD  13  
POD  C3    C3    C  0  1  Y  N  N  115.213  92.086   4.479   1.274  -1.041  -3.329  C3    POD  14  
POD  C4    C4    C  0  1  Y  N  N  115.082  91.022   5.325   0.805  -1.426  -2.085  C4    POD  15  
POD  O2    O2    O  0  1  N  N  N  116.249  93.936   3.642   1.291   0.153  -5.225  O2    POD  16  
POD  C1    C1    C  0  1  N  N  N  115.044  93.761   2.862   2.094  -1.033  -5.398  C1    POD  17  
POD  O1    O1    O  0  1  N  N  N  114.392  92.589   3.399   2.319  -1.504  -4.053  O1    POD  18  
POD  C14   C14   C  0  1  Y  N  N  116.033  88.288   6.364   0.076  -0.644   0.850  C14   POD  19  
POD  C15   C15   C  0  1  Y  N  N  115.267  87.207   6.729   0.312  -1.353   2.013  C15   POD  20  
POD  C16   C16   C  0  1  Y  N  N  115.341  85.983   6.067   1.119  -0.816   3.004  C16   POD  21  
POD  O6    O6    O  0  1  N  N  N  114.572  84.905   6.410   1.351  -1.515   4.147  O6    POD  22  
POD  C20   C20   C  0  1  N  N  N  114.683  84.133   7.600   0.636  -2.747   4.030  C20   POD  23  
POD  C17   C17   C  0  1  Y  N  N  116.189  85.821   5.025   1.687   0.440   2.830  C17   POD  24  
POD  O7    O7    O  0  1  N  N  N  116.239  84.614   4.394   2.480   0.971   3.800  O7    POD  25  
POD  C21   C21   C  0  1  N  N  N  115.209  83.638   4.238   1.625   1.718   4.668  C21   POD  26  
POD  C18   C18   C  0  1  Y  N  N  116.958  86.884   4.652   1.452   1.148   1.657  C18   POD  27  
POD  C19   C19   C  0  1  Y  N  N  116.898  88.119   5.302   0.644   0.603   0.671  C19   POD  28  
POD  O8    O8    O  0  1  N  N  N  117.784  86.680   3.607   2.009   2.375   1.480  O8    POD  29  
POD  C22   C22   C  0  1  N  N  N  117.422  87.296   2.370   1.581   2.842   0.198  C22   POD  30  
POD  H10   H10   H  0  1  N  N  N  116.378  90.297   7.405  -2.880  -1.224  -0.774  H10   POD  31  
POD  H9    H9    H  0  1  N  N  N  118.978  89.963   7.517  -1.353   1.262   0.264  H9    POD  32  
POD  H121  1H12  H  0  0  N  N  N  118.911  90.979  10.190  -3.543   2.173   0.759  H121  POD  33  
POD  H122  2H12  H  0  0  N  N  N  119.827  89.747   9.564  -4.365   0.948  -0.261  H122  POD  34  
POD  H11   H11   H  0  1  N  N  N  114.788  89.530   7.497  -0.766  -2.320  -0.173  H11   POD  35  
POD  H8    H8    H  0  1  N  N  N  118.259  92.523   7.965  -3.041   0.620  -2.211  H8    POD  36  
POD  HO3   HO3   H  0  1  N  N  N  119.688  92.444   6.197  -1.959   2.481  -2.996  HO3   POD  37  
POD  H7    H7    H  0  1  N  N  N  117.789  93.130   5.535  -0.950   1.425  -4.088  H7    POD  38  
POD  H4    H4    H  0  1  N  N  N  114.197  90.368   5.235   1.287  -2.217  -1.528  H4    POD  39  
POD  H11A  1H1   H  0  0  N  N  N  114.390  94.664   2.842   1.551  -1.779  -5.978  H11A  POD  40  
POD  H12   2H1   H  0  1  N  N  N  115.228  93.704   1.763   3.040  -0.787  -5.880  H12   POD  41  
POD  H15   H15   H  0  1  N  N  N  114.572  87.325   7.577  -0.132  -2.328   2.149  H15   POD  42  
POD  H201  1H20  H  0  0  N  N  N  114.056  83.254   7.879   0.792  -3.345   4.928  H201  POD  43  
POD  H202  2H20  H  0  0  N  N  N  115.742  83.789   7.651  -0.427  -2.540   3.912  H202  POD  44  
POD  H203  3H20  H  0  0  N  N  N  114.606  84.853   8.447   0.998  -3.296   3.160  H203  POD  45  
POD  H211  1H21  H  0  0  N  N  N  115.249  82.650   3.721   2.218   2.165   5.466  H211  POD  46  
POD  H212  2H21  H  0  0  N  N  N  114.851  83.417   5.270   1.129   2.505   4.100  H212  POD  47  
POD  H213  3H21  H  0  0  N  N  N  114.355  84.181   3.770   0.876   1.055   5.100  H213  POD  48  
POD  H19   H19   H  0  1  N  N  N  117.533  88.960   4.976   0.457   1.154  -0.238  H19   POD  49  
POD  H221  1H22  H  0  0  N  N  N  118.105  87.127   1.505   2.005   3.829   0.011  H221  POD  50  
POD  H222  2H22  H  0  0  N  N  N  116.385  86.992   2.091   1.919   2.149  -0.571  H222  POD  51  
POD  H223  3H22  H  0  0  N  N  N  117.280  88.391   2.525   0.493   2.905   0.179  H223  POD  52  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
POD  O5   C13   DOUB  N  N   1  
POD  C13  O4    SING  N  N   2  
POD  C13  C10   SING  N  N   3  
POD  O4   C12   SING  N  N   4  
POD  C10  C9    SING  N  N   5  
POD  C10  C11   SING  N  N   6  
POD  C10  H10   SING  N  N   7  
POD  C9   C12   SING  N  N   8  
POD  C9   C8    SING  N  N   9  
POD  C9   H9    SING  N  N  10  
POD  C12  H121  SING  N  N  11  
POD  C12  H122  SING  N  N  12  
POD  C11  C5    SING  N  N  13  
POD  C11  C14   SING  N  N  14  
POD  C11  H11   SING  N  N  15  
POD  C5   C6    SING  Y  N  16  
POD  C5   C4    DOUB  Y  N  17  
POD  C6   C8    SING  N  N  18  
POD  C6   C7    DOUB  Y  N  19  
POD  C8   O3    SING  N  N  20  
POD  C8   H8    SING  N  N  21  
POD  O3   HO3   SING  N  N  22  
POD  C7   C2    SING  Y  N  23  
POD  C7   H7    SING  N  N  24  
POD  C2   C3    DOUB  Y  N  25  
POD  C2   O2    SING  N  N  26  
POD  C3   C4    SING  Y  N  27  
POD  C3   O1    SING  N  N  28  
POD  C4   H4    SING  N  N  29  
POD  O2   C1    SING  N  N  30  
POD  C1   O1    SING  N  N  31  
POD  C1   H11A  SING  N  N  32  
POD  C1   H12   SING  N  N  33  
POD  C14  C15   SING  Y  N  34  
POD  C14  C19   DOUB  Y  N  35  
POD  C15  C16   DOUB  Y  N  36  
POD  C15  H15   SING  N  N  37  
POD  C16  O6    SING  N  N  38  
POD  C16  C17   SING  Y  N  39  
POD  O6   C20   SING  N  N  40  
POD  C20  H201  SING  N  N  41  
POD  C20  H202  SING  N  N  42  
POD  C20  H203  SING  N  N  43  
POD  C17  O7    SING  N  N  44  
POD  C17  C18   DOUB  Y  N  45  
POD  O7   C21   SING  N  N  46  
POD  C21  H211  SING  N  N  47  
POD  C21  H212  SING  N  N  48  
POD  C21  H213  SING  N  N  49  
POD  C18  C19   SING  Y  N  50  
POD  C18  O8    SING  N  N  51  
POD  C19  H19   SING  N  N  52  
POD  O8   C22   SING  N  N  53  
POD  C22  H221  SING  N  N  54  
POD  C22  H222  SING  N  N  55  
POD  C22  H223  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
POD  SMILES            ACDLabs               10.04  "O=C4OCC5C(O)c2cc1OCOc1cc2C(c3cc(OC)c(OC)c(OC)c3)C45"  
POD  SMILES_CANONICAL  CACTVS                3.341  "COc1cc(cc(OC)c1OC)[C@H]2[C@@H]3[C@H](COC3=O)[C@@H](O)c4cc5OCOc5cc24"  
POD  SMILES            CACTVS                3.341  "COc1cc(cc(OC)c1OC)[CH]2[CH]3[CH](COC3=O)[CH](O)c4cc5OCOc5cc24"  
POD  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "COc1cc(cc(c1OC)OC)[C@@H]2c3cc4c(cc3[C@@H]([C@@H]5C2C(=O)OC5)O)OCO4"  
POD  SMILES            "OpenEye OEToolkits"  1.5.0  "COc1cc(cc(c1OC)OC)C2c3cc4c(cc3C(C5C2C(=O)OC5)O)OCO4"  
POD  InChI             InChI                 1.03   "InChI=1S/C22H22O8/c1-25-16-4-10(5-17(26-2)21(16)27-3)18-11-6-14-15(30-9-29-14)7-12(11)20(23)13-8-28-22(24)19(13)18/h4-7,13,18-20,23H,8-9H2,1-3H3/t13-,18+,19-,20-/m0/s1"  
POD  InChIKey          InChI                 1.03   YJGVMLPVUAXIQN-XVVDYKMHSA-N  
#
_pdbx_chem_comp_identifier.comp_id          POD
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          ACDLabs
_pdbx_chem_comp_identifier.program_version  10.04
_pdbx_chem_comp_identifier.identifier       "(5R,5aR,8aR,9R)-9-hydroxy-5-(3,4,5-trimethoxyphenyl)-5,8,8a,9-tetrahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol-6(5aH)-one"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
POD  "Create component"   2004-03-04  RCSB  
POD  "Modify descriptor"  2011-06-04  RCSB  
POD  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     POD
_pdbx_chem_comp_synonyms.name        PODOPHYLLOTOXIN
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
