data_RTD
#

_chem_comp.id                                   RTD
_chem_comp.name                                 "(2R)-phenyl(sulfanyl)ethanoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C8 H8 O2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "alpha-mercaptophenylacetic acid, R-thiomandelic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2013-02-26
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       168.213
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RTD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2M5D
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RTD  O1   O1   O  0  1  N  N  N  6.350  11.875   0.454  -1.268   1.482   0.933  O1   RTD   1  
RTD  C    C    C  0  1  N  N  N  5.733  10.844   0.813  -1.676   0.893  -0.040  C    RTD   2  
RTD  O2   O2   O  0  1  N  N  N  6.144   9.677   0.645  -2.813   1.288  -0.635  O2   RTD   3  
RTD  CA   CA   C  0  1  N  N  R  4.324  11.073   1.524  -0.907  -0.281  -0.589  CA   RTD   4  
RTD  S1   S1   S  0  1  N  N  N  3.153   9.675   1.252  -1.486  -1.807   0.203  S1   RTD   5  
RTD  CB   CB   C  0  1  Y  N  N  3.779  12.425   1.189   0.562  -0.095  -0.307  CB   RTD   6  
RTD  CG1  CG1  C  0  1  Y  N  N  3.387  13.337   2.171   1.464  -0.035  -1.353  CG1  RTD   7  
RTD  CD1  CD1  C  0  1  Y  N  N  2.933  14.604   1.817   2.811   0.135  -1.094  CD1  RTD   8  
RTD  CE   CE   C  0  1  Y  N  N  2.859  14.980   0.482   3.256   0.245   0.210  CE   RTD   9  
RTD  CD2  CD2  C  0  1  Y  N  N  3.242  14.074  -0.504   2.354   0.185   1.255  CD2  RTD  10  
RTD  CG2  CG2  C  0  1  Y  N  N  3.701  12.810  -0.157   1.006   0.021   0.997  CG2  RTD  11  
RTD  H1   H1   H  0  1  N  N  N  6.987   9.698   0.208  -3.269   2.048  -0.249  H1   RTD  12  
RTD  HA   HA   H  0  1  N  N  N  4.517  11.054   2.607  -1.065  -0.347  -1.665  HA   RTD  13  
RTD  H2   H2   H  0  1  N  N  N  2.102  10.072   1.905  -1.234  -1.587   1.505  H2   RTD  14  
RTD  HG1  HG1  H  0  1  N  N  N  3.436  13.057   3.213   1.116  -0.122  -2.372  HG1  RTD  15  
RTD  HD1  HD1  H  0  1  N  N  N  2.636  15.301   2.587   3.516   0.181  -1.911  HD1  RTD  16  
RTD  HE   HE   H  0  1  N  N  N  2.508  15.965   0.211   4.309   0.377   0.412  HE   RTD  17  
RTD  HD2  HD2  H  0  1  N  N  N  3.182  14.356  -1.545   2.701   0.276   2.274  HD2  RTD  18  
RTD  HG2  HG2  H  0  1  N  N  N  4.000  12.118  -0.930   0.301  -0.026   1.814  HG2  RTD  19  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RTD  CD2  CG2  DOUB  Y  N   1  
RTD  CD2  CE   SING  Y  N   2  
RTD  CG2  CB   SING  Y  N   3  
RTD  O1   C    DOUB  N  N   4  
RTD  CE   CD1  DOUB  Y  N   5  
RTD  O2   C    SING  N  N   6  
RTD  C    CA   SING  N  N   7  
RTD  CB   CA   SING  N  N   8  
RTD  CB   CG1  DOUB  Y  N   9  
RTD  S1   CA   SING  N  N  10  
RTD  CD1  CG1  SING  Y  N  11  
RTD  O2   H1   SING  N  N  12  
RTD  CA   HA   SING  N  N  13  
RTD  S1   H2   SING  N  N  14  
RTD  CG1  HG1  SING  N  N  15  
RTD  CD1  HD1  SING  N  N  16  
RTD  CE   HE   SING  N  N  17  
RTD  CD2  HD2  SING  N  N  18  
RTD  CG2  HG2  SING  N  N  19  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RTD  SMILES            ACDLabs               12.01  "O=C(O)C(S)c1ccccc1"  
RTD  InChI             InChI                 1.03   "InChI=1S/C8H8O2S/c9-8(10)7(11)6-4-2-1-3-5-6/h1-5,7,11H,(H,9,10)/t7-/m1/s1"  
RTD  InChIKey          InChI                 1.03   QYIGFZOHYGYBLX-SSDOTTSWSA-N  
RTD  SMILES_CANONICAL  CACTVS                3.370  "OC(=O)[C@H](S)c1ccccc1"  
RTD  SMILES            CACTVS                3.370  "OC(=O)[CH](S)c1ccccc1"  
RTD  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "c1ccc(cc1)[C@H](C(=O)O)S"  
RTD  SMILES            "OpenEye OEToolkits"  1.7.6  "c1ccc(cc1)C(C(=O)O)S"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RTD  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2R)-phenyl(sulfanyl)ethanoic acid"  
RTD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R)-2-phenyl-2-sulfanyl-ethanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RTD  "Create component"  2013-02-26  PDBJ  
RTD  "Initial release"   2013-10-09  RCSB  
RTD  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     RTD
_pdbx_chem_comp_synonyms.name        "alpha-mercaptophenylacetic acid, R-thiomandelic acid"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
