data_YPD
# 
_chem_comp.id                                    YPD 
_chem_comp.name                                  "(2Z)-N-[4-(4-chlorobenzene-1-sulfonyl)phenyl]-2-cyano-3-hydroxy-3-(5-methyl-1,2-oxazol-4-yl)prop-2-enamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H14 Cl N3 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-15 
_chem_comp.pdbx_modified_date                    2024-02-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        443.860 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YPD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7FTU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YPD C13  C1  C  0 1 N N N N N N 16.711 7.611  16.566 -6.957 1.519  2.378  C13  YPD 1  
YPD C15  C2  C  0 1 Y N N N N N 15.009 9.829  22.669 -0.383 -0.468 -0.677 C15  YPD 2  
YPD C16  C3  C  0 1 Y N N N N N 16.331 9.586  23.023 0.449  -0.841 -1.724 C16  YPD 3  
YPD C17  C4  C  0 1 Y N N N N N 16.748 9.748  24.334 1.732  -1.280 -1.462 C17  YPD 4  
YPD C18  C5  C  0 1 Y N N N N N 15.841 10.173 25.293 2.188  -1.350 -0.158 C18  YPD 5  
YPD C19  C6  C  0 1 Y N N N N N 14.521 10.430 24.957 1.361  -0.981 0.887  C19  YPD 6  
YPD C20  C7  C  0 1 Y N N N N N 14.107 10.259 23.644 0.077  -0.539 0.632  C20  YPD 7  
YPD C22  C8  C  0 1 Y N N N N N 17.117 11.959 27.056 4.874  -0.497 0.158  C22  YPD 8  
YPD C23  C9  C  0 1 Y N N N N N 16.458 12.989 27.711 5.101  0.207  1.325  C23  YPD 9  
YPD C24  C10 C  0 1 Y N N N N N 17.048 14.240 27.782 5.929  1.314  1.315  C24  YPD 10 
YPD C25  C11 C  0 1 Y N N N N N 18.289 14.435 27.209 6.531  1.717  0.137  C25  YPD 11 
YPD C26  C12 C  0 1 Y N N N N N 18.948 13.416 26.556 6.304  1.011  -1.031 C26  YPD 12 
YPD C27  C13 C  0 1 Y N N N N N 18.360 12.166 26.480 5.476  -0.095 -1.020 C27  YPD 13 
YPD C1   C14 C  0 1 N N N N N N 13.418 9.446  20.759 -2.685 -0.324 -0.094 C1   YPD 14 
YPD O2   O1  O  0 1 N N N N N N 12.367 9.558  21.400 -2.449 -0.923 0.940  O2   YPD 15 
YPD C3   C15 C  0 1 N N N N N N 13.365 9.131  19.329 -4.060 0.063  -0.419 C3   YPD 16 
YPD C4   C16 C  0 1 N N N N N N 12.073 8.906  18.781 -4.337 0.767  -1.634 C4   YPD 17 
YPD N5   N1  N  0 1 N N N N N N 11.021 8.737  18.381 -4.557 1.326  -2.599 N5   YPD 18 
YPD C6   C17 C  0 1 N N N N N N 14.451 9.043  18.475 -5.097 -0.254 0.454  C6   YPD 19 
YPD O7   O2  O  0 1 N N N N N N 15.677 9.244  18.927 -4.853 -1.009 1.546  O7   YPD 20 
YPD C8   C18 C  0 1 Y N N N N N 14.398 8.758  17.040 -6.456 0.233  0.187  C8   YPD 21 
YPD C9   C19 C  0 1 Y N N N N N 15.367 8.173  16.282 -7.278 0.999  1.001  C9   YPD 22 
YPD O10  O3  O  0 1 Y N N N N N 14.950 8.085  15.007 -8.410 1.181  0.317  O10  YPD 23 
YPD N11  N2  N  0 1 Y N N N N N 13.662 8.659  14.905 -8.401 0.653  -0.767 N11  YPD 24 
YPD C12  C20 C  0 1 Y N N N N N 13.375 9.049  16.111 -7.285 0.035  -1.014 C12  YPD 25 
YPD N14  N3  N  0 1 N N N N N N 14.656 9.648  21.307 -1.681 -0.017 -0.939 N14  YPD 26 
YPD S21  S1  S  0 1 N N N N N N 16.377 10.364 26.964 3.825  -1.912 0.172  S21  YPD 27 
YPD CL28 CL1 CL 0 0 N N N N N N 19.036 16.003 27.303 7.571  3.107  0.123  CL28 YPD 28 
YPD O29  O4  O  0 1 N N N N N N 15.213 10.367 27.808 3.821  -2.395 1.509  O29  YPD 29 
YPD O30  O5  O  0 1 N N N N N N 17.403 9.382  27.201 4.208  -2.708 -0.941 O30  YPD 30 
YPD H35  H1  H  0 1 N N N N N N 17.143 7.205  15.639 -6.411 2.459  2.294  H35  YPD 31 
YPD H34  H2  H  0 1 N N N N N N 17.365 8.404  16.958 -7.884 1.686  2.928  H34  YPD 32 
YPD H33  H3  H  0 1 N N N N N N 16.622 6.807  17.311 -6.346 0.790  2.910  H33  YPD 33 
YPD H37  H4  H  0 1 N N N N N N 17.038 9.269  22.271 0.094  -0.787 -2.742 H37  YPD 34 
YPD H38  H5  H  0 1 N N N N N N 17.773 9.545  24.607 2.380  -1.570 -2.276 H38  YPD 35 
YPD H39  H6  H  0 1 N N N N N N 13.821 10.760 25.710 1.719  -1.037 1.904  H39  YPD 36 
YPD H40  H7  H  0 1 N N N N N N 13.081 10.460 23.374 -0.567 -0.250 1.449  H40  YPD 37 
YPD H41  H8  H  0 1 N N N N N N 15.492 12.817 28.162 4.630  -0.107 2.245  H41  YPD 38 
YPD H42  H9  H  0 1 N N N N N N 16.543 15.054 28.280 6.106  1.865  2.228  H42  YPD 39 
YPD H43  H10 H  0 1 N N N N N N 19.915 13.592 26.108 6.774  1.325  -1.952 H43  YPD 40 
YPD H44  H11 H  0 1 N N N N N N 18.867 11.357 25.975 5.299  -0.646 -1.932 H44  YPD 41 
YPD H31  H12 H  0 1 N N N N N N 16.298 9.146  18.214 -5.604 -1.203 2.122  H31  YPD 42 
YPD H32  H13 H  0 1 N N N N N N 12.452 9.543  16.375 -7.022 -0.510 -1.909 H32  YPD 43 
YPD H36  H14 H  0 1 N N N N N N 15.416 9.671  20.658 -1.858 0.516  -1.729 H36  YPD 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YPD C1  O2   DOUB N N 1  
YPD C1  C3   SING N N 2  
YPD C1  N14  SING N N 3  
YPD C3  C4   SING N N 4  
YPD C3  C6   DOUB N Z 5  
YPD C4  N5   TRIP N N 6  
YPD C6  O7   SING N N 7  
YPD C6  C8   SING N N 8  
YPD C8  C9   DOUB Y N 9  
YPD C8  C12  SING Y N 10 
YPD C9  O10  SING Y N 11 
YPD C9  C13  SING N N 12 
YPD O10 N11  SING Y N 13 
YPD N11 C12  DOUB Y N 14 
YPD N14 C15  SING N N 15 
YPD C15 C16  DOUB Y N 16 
YPD C15 C20  SING Y N 17 
YPD C16 C17  SING Y N 18 
YPD C17 C18  DOUB Y N 19 
YPD C18 C19  SING Y N 20 
YPD C18 S21  SING N N 21 
YPD C19 C20  DOUB Y N 22 
YPD S21 C22  SING N N 23 
YPD S21 O29  DOUB N N 24 
YPD S21 O30  DOUB N N 25 
YPD C22 C23  DOUB Y N 26 
YPD C22 C27  SING Y N 27 
YPD C23 C24  SING Y N 28 
YPD C24 C25  DOUB Y N 29 
YPD C25 C26  SING Y N 30 
YPD C25 CL28 SING N N 31 
YPD C26 C27  DOUB Y N 32 
YPD C13 H35  SING N N 33 
YPD C13 H34  SING N N 34 
YPD C13 H33  SING N N 35 
YPD C16 H37  SING N N 36 
YPD C17 H38  SING N N 37 
YPD C19 H39  SING N N 38 
YPD C20 H40  SING N N 39 
YPD C23 H41  SING N N 40 
YPD C24 H42  SING N N 41 
YPD C26 H43  SING N N 42 
YPD C27 H44  SING N N 43 
YPD O7  H31  SING N N 44 
YPD C12 H32  SING N N 45 
YPD N14 H36  SING N N 46 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YPD SMILES           ACDLabs              12.01 "Cc1oncc1C(/O)=C(\C#N)C(=O)Nc1ccc(cc1)S(=O)(=O)c1ccc(Cl)cc1"                                                                                          
YPD InChI            InChI                1.06  "InChI=1S/C20H14ClN3O5S/c1-12-18(11-23-29-12)19(25)17(10-22)20(26)24-14-4-8-16(9-5-14)30(27,28)15-6-2-13(21)3-7-15/h2-9,11,25H,1H3,(H,24,26)/b19-17-" 
YPD InChIKey         InChI                1.06  CRJGEGMPYMIJCM-ZPHPHTNESA-N                                                                                                                           
YPD SMILES_CANONICAL CACTVS               3.385 "Cc1oncc1C(/O)=C(C#N)/C(=O)Nc2ccc(cc2)[S](=O)(=O)c3ccc(Cl)cc3"                                                                                        
YPD SMILES           CACTVS               3.385 "Cc1oncc1C(O)=C(C#N)C(=O)Nc2ccc(cc2)[S](=O)(=O)c3ccc(Cl)cc3"                                                                                          
YPD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(cno1)/C(=C(\C#N)/C(=O)Nc2ccc(cc2)S(=O)(=O)c3ccc(cc3)Cl)/O"                                                                                      
YPD SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(cno1)C(=C(C#N)C(=O)Nc2ccc(cc2)S(=O)(=O)c3ccc(cc3)Cl)O"                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YPD "SYSTEMATIC NAME" ACDLabs              12.01 "(2Z)-N-[4-(4-chlorobenzene-1-sulfonyl)phenyl]-2-cyano-3-hydroxy-3-(5-methyl-1,2-oxazol-4-yl)prop-2-enamide"    
YPD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(~{Z})-~{N}-[4-(4-chlorophenyl)sulfonylphenyl]-2-cyano-3-(5-methyl-1,2-oxazol-4-yl)-3-oxidanyl-prop-2-enamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YPD "Create component" 2023-02-15 RCSB 
YPD "Initial release"  2024-02-21 RCSB 
# 
