data_Z2D
#

_chem_comp.id                                   Z2D
_chem_comp.name                                 alpha-L-allopyranose
_chem_comp.type                                 "L-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "alpha-L-allose; L-allose; allose"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-12-17
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       180.156
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Z2D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2AXT
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  Z2D  alpha-L-allose  PDB  ?  
2  Z2D  L-allose        PDB  ?  
3  Z2D  allose          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Z2D  C1   C1   C  0  1  N  N  R  54.425  34.771  61.177   0.842  -1.383   0.261  C1   Z2D   1  
Z2D  C2   C2   C  0  1  N  N  S  54.580  35.151  62.668   1.632  -0.194   0.813  C2   Z2D   2  
Z2D  C3   C3   C  0  1  N  N  S  55.378  34.015  63.366   1.086   1.100   0.202  C3   Z2D   3  
Z2D  C4   C4   C  0  1  N  N  R  54.699  32.601  63.179  -0.411   1.204   0.508  C4   Z2D   4  
Z2D  C5   C5   C  0  1  N  N  S  54.392  32.302  61.680  -1.122  -0.040  -0.032  C5   Z2D   5  
Z2D  C6   C6   C  0  1  N  N  N  55.593  31.726  60.967  -2.609   0.028   0.322  C6   Z2D   6  
Z2D  O1   O1   O  0  1  N  Y  N  53.682  35.787  60.480   1.026  -1.461  -1.154  O1   Z2D   7  
Z2D  O2   O2   O  0  1  N  N  N  53.290  35.351  63.282   3.013  -0.337   0.472  O2   Z2D   8  
Z2D  O3   O3   O  0  1  N  N  N  55.584  34.279  64.770   1.284   1.081  -1.213  O3   Z2D   9  
Z2D  O4   O4   O  0  1  N  N  N  53.514  32.473  63.932  -0.947   2.372  -0.118  O4   Z2D  10  
Z2D  O5   O5   O  0  1  N  N  N  53.759  33.469  60.976  -0.545  -1.209   0.553  O5   Z2D  11  
Z2D  O6   O6   O  0  1  N  N  N  55.773  30.355  61.333  -3.293  -1.072  -0.281  O6   Z2D  12  
Z2D  H1   H1   H  0  1  N  N  N  55.435  34.712  60.745   1.199  -2.303   0.725  H1   Z2D  13  
Z2D  HO1  H1O  H  0  1  N  Y  N  53.593  35.544  59.566   0.552  -2.194  -1.572  HO1  Z2D  14  
Z2D  H2   H2   H  0  1  N  N  N  55.170  36.077  62.731   1.527  -0.158   1.897  H2   Z2D  15  
Z2D  HO2  H2O  H  0  1  N  Y  N  53.406  35.583  64.196   3.423  -1.139   0.823  HO2  Z2D  16  
Z2D  H3   H3   H  0  1  N  N  N  56.361  33.962  62.875   1.607   1.955   0.632  H3   Z2D  17  
Z2D  HO3  H3O  H  0  1  N  Y  N  56.074  33.564  65.159   2.211   1.010  -1.480  HO3  Z2D  18  
Z2D  H4   H4   H  0  1  N  N  N  55.425  31.848  63.519  -0.559   1.268   1.586  H4   Z2D  19  
Z2D  HO4  H4O  H  0  1  N  Y  N  53.140  31.611  63.791  -0.538   3.198   0.175  HO4  Z2D  20  
Z2D  H5   H5   H  0  1  N  N  N  53.634  31.505  61.689  -1.008  -0.081  -1.116  H5   Z2D  21  
Z2D  H62  H61  H  0  1  N  N  N  56.490  32.298  61.246  -2.727  -0.020   1.405  H62  Z2D  22  
Z2D  H61  H62  H  0  1  N  N  N  55.438  31.795  59.880  -3.029   0.964  -0.047  H61  Z2D  23  
Z2D  HO6  H6O  H  0  1  N  Y  N  56.530  30.003  60.880  -4.242  -1.093  -0.098  HO6  Z2D  24  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Z2D  C1  O1   SING  N  N   1  
Z2D  C1  C2   SING  N  N   2  
Z2D  C1  O5   SING  N  N   3  
Z2D  C1  H1   SING  N  N   4  
Z2D  C2  O2   SING  N  N   5  
Z2D  C2  C3   SING  N  N   6  
Z2D  C2  H2   SING  N  N   7  
Z2D  C3  O3   SING  N  N   8  
Z2D  C3  C4   SING  N  N   9  
Z2D  C3  H3   SING  N  N  10  
Z2D  C4  H4   SING  N  N  11  
Z2D  C4  C5   SING  N  N  12  
Z2D  C4  O4   SING  N  N  13  
Z2D  C5  O5   SING  N  N  14  
Z2D  C5  C6   SING  N  N  15  
Z2D  C5  H5   SING  N  N  16  
Z2D  C6  H61  SING  N  N  17  
Z2D  C6  H62  SING  N  N  18  
Z2D  C6  O6   SING  N  N  19  
Z2D  O1  HO1  SING  N  N  20  
Z2D  O2  HO2  SING  N  N  21  
Z2D  O3  HO3  SING  N  N  22  
Z2D  O4  HO4  SING  N  N  23  
Z2D  O6  HO6  SING  N  N  24  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Z2D  SMILES            ACDLabs               12.01  "OC1C(O)C(OC(O)C1O)CO"  
Z2D  InChI             InChI                 1.03   "InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4-,5-,6+/m0/s1"  
Z2D  InChIKey          InChI                 1.03   WQZGKKKJIJFFOK-GKFJPSPNSA-N  
Z2D  SMILES_CANONICAL  CACTVS                3.370  "OC[C@@H]1O[C@@H](O)[C@@H](O)[C@@H](O)[C@H]1O"  
Z2D  SMILES            CACTVS                3.370  "OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O"  
Z2D  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C([C@H]1[C@@H]([C@@H]([C@@H]([C@@H](O1)O)O)O)O)O"  
Z2D  SMILES            "OpenEye OEToolkits"  1.7.6  "C(C1C(C(C(C(O1)O)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Z2D  "SYSTEMATIC NAME"                      ACDLabs               12.01  alpha-L-allopyranose  
Z2D  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.7.6  "(2R,3S,4S,5R,6S)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol"  
Z2D  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    LAllpa  
Z2D  "COMMON NAME"                          GMML                  1.0    a-L-allopyranose  
Z2D  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    a-L-Allp  
Z2D  "SNFG CARBOHYDRATE SYMBOL"             GMML                  1.0    All  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
Z2D  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
Z2D  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
Z2D  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
Z2D  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Z2D  "Create component"          2012-12-17  RCSB  
Z2D  "Modify atom id"            2013-03-03  RCSB  
Z2D  "Other modification"        2019-08-12  RCSB  
Z2D  "Other modification"        2019-12-19  RCSB  
Z2D  "Other modification"        2020-06-03  RCSB  
Z2D  "Other modification"        2020-06-10  RCSB  
Z2D  "Other modification"        2020-07-03  RCSB  
Z2D  "Modify atom id"            2020-07-17  RCSB  
Z2D  "Modify component atom id"  2020-07-17  RCSB  
Z2D  "Initial release"           2020-07-29  RCSB  
##
