data_AFE
# 
_chem_comp.id                                    AFE 
_chem_comp.name                                  "5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-chromen-3-yl 6-deoxy-alpha-L-mannopyranoside" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H20 O10" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "afzelin; kaempherol 3-O-alpha-rhamnoside" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-04-19 
_chem_comp.pdbx_modified_date                    2020-05-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        432.378 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     AFE 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4EL9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
AFE O9   O9   O 0 1 N N N 31.236 5.195 5.138  4.410  2.490  1.129  O9   AFE 1  
AFE C23  C23  C 0 1 N N R 32.064 5.063 6.241  3.283  1.752  0.650  C23  AFE 2  
AFE C22  C22  C 0 1 N N R 33.403 4.539 5.829  2.130  2.714  0.352  C22  AFE 3  
AFE O22  O22  O 0 1 N N N 33.893 5.296 4.791  2.560  3.700  -0.589 O22  AFE 4  
AFE C24  C24  C 0 1 N N R 32.230 6.395 6.869  3.664  1.014  -0.638 C24  AFE 5  
AFE O61  O61  O 0 1 N N N 31.017 6.850 7.340  4.691  0.061  -0.356 O61  AFE 6  
AFE C25  C25  C 0 1 N N S 33.191 6.272 8.009  2.431  0.291  -1.186 C25  AFE 7  
AFE C51  C51  C 0 1 N N N 33.343 7.608 8.655  2.788  -0.399 -2.504 C51  AFE 8  
AFE O7   O7   O 0 1 N N N 34.418 5.812 7.564  1.386  1.239  -1.412 O7   AFE 9  
AFE C21  C21  C 0 1 N N S 34.364 4.558 6.987  0.956  1.926  -0.234 C21  AFE 10 
AFE O8   O8   O 0 1 N N N 33.963 3.548 7.856  0.492  0.976  0.728  O8   AFE 11 
AFE C3   C3   C 0 1 N N N 34.650 3.486 9.065  -0.719 0.400  0.493  C3   AFE 12 
AFE C4   C4   C 0 1 N N N 36.125 3.352 9.096  -1.891 1.196  0.435  C4   AFE 13 
AFE O2   O2   O 0 1 N N N 36.865 3.324 7.955  -1.845 2.406  0.592  O2   AFE 14 
AFE C2   C2   C 0 1 N N N 33.986 3.518 10.260 -0.813 -0.947 0.306  C2   AFE 15 
AFE C11  C11  C 0 1 Y N N 32.513 3.571 10.450 0.416  -1.759 0.364  C11  AFE 16 
AFE C12  C12  C 0 1 Y N N 31.642 2.972 9.409  1.315  -1.597 1.422  C12  AFE 17 
AFE C13  C13  C 0 1 Y N N 30.290 2.957 9.604  2.462  -2.359 1.472  C13  AFE 18 
AFE C14  C14  C 0 1 Y N N 29.719 3.495 10.872 2.726  -3.286 0.472  C14  AFE 19 
AFE O5   O5   O 0 1 N N N 28.360 3.467 11.073 3.858  -4.035 0.525  O5   AFE 20 
AFE C15  C15  C 0 1 Y N N 30.531 4.001 11.857 1.836  -3.451 -0.582 C15  AFE 21 
AFE C16  C16  C 0 1 Y N N 32.005 4.016 11.632 0.684  -2.698 -0.637 C16  AFE 22 
AFE O1   O1   O 0 1 N N N 34.661 3.420 11.458 -1.985 -1.561 0.071  O1   AFE 23 
AFE C9   C9   C 0 1 Y N N 36.022 3.296 11.542 -3.152 -0.888 0.004  C9   AFE 24 
AFE C8   C8   C 0 1 Y N N 36.618 3.214 12.889 -4.342 -1.556 -0.241 C8   AFE 25 
AFE C7   C7   C 0 1 Y N N 37.971 3.086 13.001 -5.533 -0.849 -0.307 C7   AFE 26 
AFE O4   O4   O 0 1 N N N 38.477 3.023 14.263 -6.694 -1.511 -0.547 O4   AFE 27 
AFE C6   C6   C 0 1 Y N N 38.841 3.046 11.781 -5.551 0.530  -0.130 C6   AFE 28 
AFE C5   C5   C 0 1 Y N N 38.260 3.133 10.541 -4.374 1.214  0.114  C5   AFE 29 
AFE C10  C10  C 0 1 Y N N 36.783 3.260 10.419 -3.166 0.507  0.177  C10  AFE 30 
AFE O3   O3   O 0 1 N N N 39.012 3.089 9.410  -4.389 2.560  0.287  O3   AFE 31 
AFE HO9  HO9  H 0 1 N N N 30.390 5.528 5.414  4.240  2.982  1.943  HO9  AFE 32 
AFE H23  H23  H 0 1 N N N 31.621 4.372 6.974  2.972  1.030  1.405  H23  AFE 33 
AFE H22  H22  H 0 1 N N N 33.279 3.495 5.505  1.816  3.203  1.274  H22  AFE 34 
AFE HO22 HO22 H 0 0 N N N 34.743 4.963 4.530  1.906  4.390  -0.764 HO22 AFE 35 
AFE H24  H24  H 0 1 N N N 32.644 7.094 6.127  4.024  1.731  -1.375 H24  AFE 36 
AFE HO61 HO61 H 0 0 N N N 31.132 7.704 7.741  4.981  -0.444 -1.128 HO61 AFE 37 
AFE H25  H25  H 0 1 N N N 32.770 5.572 8.746  2.096  -0.454 -0.464 H25  AFE 38 
AFE H512 H512 H 0 0 N N N 34.048 7.531 9.496  3.586  -1.121 -2.332 H512 AFE 39 
AFE H513 H513 H 0 0 N N N 33.728 8.329 7.919  1.910  -0.914 -2.894 H513 AFE 40 
AFE H511 H511 H 0 0 N N N 32.365 7.949 9.026  3.122  0.347  -3.225 H511 AFE 41 
AFE H21  H21  H 0 1 N N N 35.358 4.307 6.589  0.148  2.611  -0.488 H21  AFE 42 
AFE H12  H12  H 0 1 N N N 32.071 2.554 8.510  1.110  -0.876 2.200  H12  AFE 43 
AFE H13  H13  H 0 1 N N N 29.637 2.557 8.842  3.156  -2.234 2.289  H13  AFE 44 
AFE HO5  HO5  H 0 1 N N N 28.157 3.843 11.921 3.755  -4.870 1.001  HO5  AFE 45 
AFE H15  H15  H 0 1 N N N 30.110 4.381 12.776 2.045  -4.174 -1.357 H15  AFE 46 
AFE H16  H16  H 0 1 N N N 32.667 4.379 12.404 -0.010 -2.830 -1.454 H16  AFE 47 
AFE H8   H8   H 0 1 N N N 35.994 3.255 13.770 -4.341 -2.626 -0.380 H8   AFE 48 
AFE HO4  HO4  H 0 1 N N N 37.766 3.063 14.892 -7.146 -1.815 0.252  HO4  AFE 49 
AFE H6   H6   H 0 1 N N N 39.912 2.950 11.877 -6.485 1.068  -0.183 H6   AFE 50 
AFE HO3  HO3  H 0 1 N N N 38.446 3.160 8.650  -4.508 2.837  1.206  HO3  AFE 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
AFE O22 C22  SING N N 1  
AFE O9  C23  SING N N 2  
AFE C22 C23  SING N N 3  
AFE C22 C21  SING N N 4  
AFE C23 C24  SING N N 5  
AFE C24 O61  SING N N 6  
AFE C24 C25  SING N N 7  
AFE C21 O7   SING N N 8  
AFE C21 O8   SING N N 9  
AFE O7  C25  SING N N 10 
AFE O8  C3   SING N N 11 
AFE O2  C4   DOUB N N 12 
AFE C25 C51  SING N N 13 
AFE C3  C4   SING N N 14 
AFE C3  C2   DOUB N N 15 
AFE C4  C10  SING N N 16 
AFE C12 C13  DOUB Y N 17 
AFE C12 C11  SING Y N 18 
AFE O3  C5   SING N N 19 
AFE C13 C14  SING Y N 20 
AFE C2  C11  SING N N 21 
AFE C2  O1   SING N N 22 
AFE C10 C5   DOUB Y N 23 
AFE C10 C9   SING Y N 24 
AFE C11 C16  DOUB Y N 25 
AFE C5  C6   SING Y N 26 
AFE C14 O5   SING N N 27 
AFE C14 C15  DOUB Y N 28 
AFE O1  C9   SING N N 29 
AFE C9  C8   DOUB Y N 30 
AFE C16 C15  SING Y N 31 
AFE C6  C7   DOUB Y N 32 
AFE C8  C7   SING Y N 33 
AFE C7  O4   SING N N 34 
AFE O9  HO9  SING N N 35 
AFE C23 H23  SING N N 36 
AFE C22 H22  SING N N 37 
AFE O22 HO22 SING N N 38 
AFE C24 H24  SING N N 39 
AFE O61 HO61 SING N N 40 
AFE C25 H25  SING N N 41 
AFE C51 H512 SING N N 42 
AFE C51 H513 SING N N 43 
AFE C51 H511 SING N N 44 
AFE C21 H21  SING N N 45 
AFE C12 H12  SING N N 46 
AFE C13 H13  SING N N 47 
AFE O5  HO5  SING N N 48 
AFE C15 H15  SING N N 49 
AFE C16 H16  SING N N 50 
AFE C8  H8   SING N N 51 
AFE O4  HO4  SING N N 52 
AFE C6  H6   SING N N 53 
AFE O3  HO3  SING N N 54 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
AFE SMILES           ACDLabs              12.01 "O=C2C(OC1OC(C(O)C(O)C1O)C)=C(Oc3cc(O)cc(O)c23)c4ccc(O)cc4"                                                                                                                  
AFE InChI            InChI                1.03  "InChI=1S/C21H20O10/c1-8-15(25)17(27)18(28)21(29-8)31-20-16(26)14-12(24)6-11(23)7-13(14)30-19(20)9-2-4-10(22)5-3-9/h2-8,15,17-18,21-25,27-28H,1H3/t8-,15-,17+,18+,21-/m0/s1" 
AFE InChIKey         InChI                1.03  SOSLMHZOJATCCP-AEIZVZFYSA-N                                                                                                                                                  
AFE SMILES_CANONICAL CACTVS               3.370 "C[C@@H]1O[C@@H](OC2=C(Oc3cc(O)cc(O)c3C2=O)c4ccc(O)cc4)[C@H](O)[C@H](O)[C@H]1O"                                                                                              
AFE SMILES           CACTVS               3.370 "C[CH]1O[CH](OC2=C(Oc3cc(O)cc(O)c3C2=O)c4ccc(O)cc4)[CH](O)[CH](O)[CH]1O"                                                                                                     
AFE SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)OC2=C(Oc3cc(cc(c3C2=O)O)O)c4ccc(cc4)O)O)O)O"                                                                                            
AFE SMILES           "OpenEye OEToolkits" 1.7.6 "CC1C(C(C(C(O1)OC2=C(Oc3cc(cc(c3C2=O)O)O)c4ccc(cc4)O)O)O)O"                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
AFE "SYSTEMATIC NAME" ACDLabs              12.01 "5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-chromen-3-yl 6-deoxy-alpha-L-mannopyranoside"                           
AFE "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-(4-hydroxyphenyl)-3-[(2S,3R,4R,5R,6S)-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-5,7-bis(oxidanyl)chromen-4-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
AFE "Create component" 2012-04-19 RCSB 
AFE "Initial release"  2012-08-31 RCSB 
AFE "Modify synonyms"  2020-05-26 PDBE 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 AFE afzelin                           ? ? 
2 AFE "kaempherol 3-O-alpha-rhamnoside" ? ? 
# 
