data_1CF
#

_chem_comp.id                                   1CF
_chem_comp.name                                 "2-hydroxyethyl 6-deoxy-beta-L-galactopyranoside"
_chem_comp.type                                 L-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C8 H16 O6"
_chem_comp.mon_nstd_parent_comp_id              FUL
_chem_comp.pdbx_synonyms                        "2-hydroxyethyl 6-deoxy-beta-L-galactoside; 2-hydroxyethyl 6-deoxy-L-galactoside; 2-hydroxyethyl 6-deoxy-galactoside"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-12-04
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       208.209
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    1CF
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2LYG
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  1CF  "2-hydroxyethyl 6-deoxy-beta-L-galactoside"  PDB  ?  
2  1CF  "2-hydroxyethyl 6-deoxy-L-galactoside"       PDB  ?  
3  1CF  "2-hydroxyethyl 6-deoxy-galactoside"         PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
1CF  C4   C4   C  0  1  N  N  S  4.842   8.125  -0.062   2.349   0.563  -0.025  C4   1CF   1  
1CF  C5   C5   C  0  1  N  N  S  4.527   7.393  -1.377   1.309   1.482  -0.671  C5   1CF   2  
1CF  C6   C6   C  0  1  N  N  N  3.270   6.551  -1.339   1.602   2.933  -0.286  C6   1CF   3  
1CF  C11  C11  C  0  1  N  N  N  8.100   6.475  -4.645  -4.089  -0.093  -0.168  C11  1CF   4  
1CF  C12  C12  C  0  1  N  N  N  8.800   6.753  -3.315  -2.721   0.246  -0.766  C12  1CF   5  
1CF  C3   C3   C  0  1  N  N  R  6.170   8.882  -0.230   2.016  -0.893  -0.365  C3   1CF   6  
1CF  O11  O11  O  0  1  N  N  N  8.953   6.567  -5.769  -4.154   0.389   1.176  O11  1CF   7  
1CF  C1   C1   C  0  1  N  N  S  6.916   7.221  -1.904  -0.381  -0.218  -0.540  C1   1CF   8  
1CF  C2   C2   C  0  1  N  N  S  7.281   7.919  -0.605   0.593  -1.204   0.110  C2   1CF   9  
1CF  O2   O2   O  0  1  N  N  N  8.471   8.698  -0.794   0.244  -2.538  -0.266  O2   1CF  10  
1CF  O3   O3   O  0  1  N  N  N  6.640   9.551   0.956   2.940  -1.762   0.293  O3   1CF  11  
1CF  O4   O4   O  0  1  N  N  N  4.970   7.135   0.976   2.329   0.739   1.392  O4   1CF  12  
1CF  O5   O5   O  0  1  N  N  N  5.642   6.503  -1.736   0.005   1.121  -0.210  O5   1CF  13  
1CF  O1   O1   O  0  1  N  N  N  8.002   6.311  -2.231  -1.703  -0.465  -0.059  O1   1CF  14  
1CF  H4   H4   H  0  1  N  N  N  4.036   8.837   0.168   3.340   0.808  -0.409  H4   1CF  15  
1CF  H5   H5   H  0  1  N  N  N  4.410   8.150  -2.166   1.353   1.377  -1.755  H5   1CF  16  
1CF  H61  H62  H  0  1  N  N  N  2.411   7.185  -1.073   2.597   3.208  -0.637  H61  1CF  17  
1CF  H62  H61  H  0  1  N  N  N  3.100   6.101  -2.328   0.861   3.588  -0.746  H62  1CF  18  
1CF  H63  H63  H  0  1  N  N  N  3.385   5.755  -0.589   1.557   3.038   0.798  H63  1CF  19  
1CF  H11  H11  H  0  1  N  N  N  7.285   7.204  -4.767  -4.872   0.379  -0.762  H11  1CF  20  
1CF  H12  H12  H  0  1  N  N  N  7.680   5.459  -4.610  -4.230  -1.173  -0.173  H12  1CF  21  
1CF  H21  H21  H  0  1  N  N  N  9.763   6.222  -3.295  -2.703  -0.042  -1.817  H21  1CF  22  
1CF  H22  H22  H  0  1  N  N  N  8.975   7.835  -3.218  -2.543   1.318  -0.679  H22  1CF  23  
1CF  H3   H3   H  0  1  N  N  N  6.051   9.613  -1.043   2.082  -1.040  -1.443  H3   1CF  24  
1CF  H6   H6   H  0  1  N  N  N  8.458   6.384  -6.559  -4.995   0.209   1.618  H6   1CF  25  
1CF  H1   H1   H  0  1  N  N  N  6.811   7.976  -2.697  -0.358  -0.346  -1.622  H1   1CF  26  
1CF  H2   H2   H  0  1  N  N  N  7.417   7.175   0.194   0.542  -1.105   1.194  H2   1CF  27  
1CF  HO2  HO2  H  0  1  N  Y  N  8.697   9.134   0.019  -0.648  -2.800   0.000  HO2  1CF  28  
1CF  HO3  HO3  H  0  1  N  Y  N  5.986  10.175   1.248   2.787  -2.701   0.122  HO3  1CF  29  
1CF  HO4  HO4  H  0  1  N  Y  N  5.165   7.564   1.801   2.530   1.640   1.680  HO4  1CF  30  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1CF  O11  C11  SING  N  N   1  
1CF  C11  C12  SING  N  N   2  
1CF  C12  O1   SING  N  N   3  
1CF  O1   C1   SING  N  N   4  
1CF  C1   O5   SING  N  N   5  
1CF  C1   C2   SING  N  N   6  
1CF  O5   C5   SING  N  N   7  
1CF  C5   C6   SING  N  N   8  
1CF  C5   C4   SING  N  N   9  
1CF  O2   C2   SING  N  N  10  
1CF  C2   C3   SING  N  N  11  
1CF  C3   C4   SING  N  N  12  
1CF  C3   O3   SING  N  N  13  
1CF  C4   O4   SING  N  N  14  
1CF  C4   H4   SING  N  N  15  
1CF  C5   H5   SING  N  N  16  
1CF  C6   H61  SING  N  N  17  
1CF  C6   H62  SING  N  N  18  
1CF  C6   H63  SING  N  N  19  
1CF  C11  H11  SING  N  N  20  
1CF  C11  H12  SING  N  N  21  
1CF  C12  H21  SING  N  N  22  
1CF  C12  H22  SING  N  N  23  
1CF  C3   H3   SING  N  N  24  
1CF  O11  H6   SING  N  N  25  
1CF  C1   H1   SING  N  N  26  
1CF  C2   H2   SING  N  N  27  
1CF  O2   HO2  SING  N  N  28  
1CF  O3   HO3  SING  N  N  29  
1CF  O4   HO4  SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
1CF  SMILES            ACDLabs               12.01  "O(CCO)C1OC(C(O)C(O)C1O)C"  
1CF  InChI             InChI                 1.03   "InChI=1S/C8H16O6/c1-4-5(10)6(11)7(12)8(14-4)13-3-2-9/h4-12H,2-3H2,1H3/t4-,5+,6+,7-,8-/m0/s1"  
1CF  InChIKey          InChI                 1.03   WEKZOSZDHREWIU-SHGPDSBTSA-N  
1CF  SMILES_CANONICAL  CACTVS                3.370  "C[C@@H]1O[C@H](OCCO)[C@@H](O)[C@H](O)[C@@H]1O"  
1CF  SMILES            CACTVS                3.370  "C[CH]1O[CH](OCCO)[CH](O)[CH](O)[CH]1O"  
1CF  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C[C@H]1[C@H]([C@H]([C@@H]([C@H](O1)OCCO)O)O)O"  
1CF  SMILES            "OpenEye OEToolkits"  1.7.6  "CC1C(C(C(C(O1)OCCO)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
1CF  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-hydroxyethyl 6-deoxy-beta-L-galactopyranoside"  
1CF  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2S,3S,4R,5S,6S)-2-(2-hydroxyethyloxy)-6-methyl-oxane-3,4,5-triol"  
#
_pdbx_chem_comp_related.comp_id            1CF
_pdbx_chem_comp_related.related_comp_id    FUL
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  1CF  C1   FUL  C1   "Carbohydrate core"  
 2  1CF  C2   FUL  C2   "Carbohydrate core"  
 3  1CF  C3   FUL  C3   "Carbohydrate core"  
 4  1CF  C4   FUL  C4   "Carbohydrate core"  
 5  1CF  C5   FUL  C5   "Carbohydrate core"  
 6  1CF  C6   FUL  C6   "Carbohydrate core"  
 7  1CF  O1   FUL  O1   "Carbohydrate core"  
 8  1CF  O2   FUL  O2   "Carbohydrate core"  
 9  1CF  O3   FUL  O3   "Carbohydrate core"  
10  1CF  O4   FUL  O4   "Carbohydrate core"  
11  1CF  O5   FUL  O5   "Carbohydrate core"  
12  1CF  H1   FUL  H1   "Carbohydrate core"  
13  1CF  H2   FUL  H2   "Carbohydrate core"  
14  1CF  H3   FUL  H3   "Carbohydrate core"  
15  1CF  H4   FUL  H4   "Carbohydrate core"  
16  1CF  H5   FUL  H5   "Carbohydrate core"  
17  1CF  H62  FUL  H62  "Carbohydrate core"  
18  1CF  H61  FUL  H61  "Carbohydrate core"  
19  1CF  H63  FUL  H63  "Carbohydrate core"  
20  1CF  HO2  FUL  HO2  "Carbohydrate core"  
21  1CF  HO3  FUL  HO3  "Carbohydrate core"  
22  1CF  HO4  FUL  HO4  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
1CF  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
1CF  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
1CF  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
1CF  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
1CF  "Create component"          2012-12-04  RCSB  
1CF  "Initial release"           2014-01-29  RCSB  
1CF  "Other modification"        2020-07-03  RCSB  
1CF  "Modify parent residue"     2020-07-17  RCSB  
1CF  "Modify synonyms"           2020-07-17  RCSB  
1CF  "Modify internal type"      2020-07-17  RCSB  
1CF  "Modify linking type"       2020-07-17  RCSB  
1CF  "Modify atom id"            2020-07-17  RCSB  
1CF  "Modify component atom id"  2020-07-17  RCSB  
1CF  "Modify leaving atom flag"  2020-07-17  RCSB  
##
