data_2ZF
# 
_chem_comp.id                                    2ZF 
_chem_comp.name                                  "N-(tert-butoxycarbonyl)-L-alpha-glutamyl-N-[(1R)-1-(carboxycarbonyl)-3,3-difluoropropyl]-L-leucinamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H33 F2 N3 O9" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-12-12 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        509.498 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     2ZF 
_chem_comp.pdbx_model_coordinates_details        "not provided" 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1DY9 
_chem_comp.pdbx_subcomponent_list                "BOC GLU LEU FKI" 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
2ZF O1   O1  O 0 1 N N N N N N 55.997 5.697  4.435  5.160  -0.226 1.020  O1   BOC 1  
2ZF C    C1  C 0 1 N N N N N N 55.768 6.875  4.186  4.939  -0.709 -0.073 C    BOC 2  
2ZF O2   O2  O 0 1 N N N N N N 54.647 7.589  4.440  5.957  -1.171 -0.824 O2   BOC 3  
2ZF CT   C2  C 0 1 N N N N N N 53.661 7.037  5.330  7.292  -1.059 -0.264 CT   BOC 4  
2ZF C1   C3  C 0 1 N N N N N N 52.515 8.061  5.447  7.361  -1.842 1.049  C1   BOC 5  
2ZF C2   C4  C 0 1 N N N N N N 53.088 5.750  4.717  8.309  -1.632 -1.253 C2   BOC 6  
2ZF C3   C5  C 0 1 N N N N N N 54.238 6.775  6.729  7.612  0.413  0.003  C3   BOC 7  
2ZF N    N1  N 0 1 N N N N N N 56.700 7.674  3.582  3.674  -0.787 -0.532 N    GLU 8  
2ZF CA   C6  C 0 1 N N S N N N 57.992 7.085  3.281  2.566  -0.290 0.287  CA   GLU 9  
2ZF C4   C7  C 0 1 N N N N N N 58.924 7.461  4.471  1.295  -1.001 -0.103 C    GLU 10 
2ZF O    O4  O 0 1 N N N N N N 59.402 8.595  4.577  1.313  -1.839 -0.979 O    GLU 11 
2ZF CB   C8  C 0 1 N N N N N N 58.697 7.338  1.926  2.399  1.214  0.061  CB   GLU 12 
2ZF CG   C9  C 0 1 N N N N N N 60.043 6.533  1.997  3.640  1.947  0.573  CG   GLU 13 
2ZF CD   C10 C 0 1 N N N N N N 60.427 6.058  0.561  3.476  3.428  0.350  CD   GLU 14 
2ZF OE1  O5  O 0 1 N N N N N N 61.353 5.251  0.531  2.469  3.854  -0.165 OE1  GLU 15 
2ZF OE2  O6  O 0 1 N N N N N N 60.394 6.923  -0.321 4.448  4.275  0.724  OE2  GLU 16 
2ZF N1   N2  N 0 1 N N N N N N 59.512 6.355  5.067  0.138  -0.704 0.522  N    LEU 17 
2ZF CA1  C11 C 0 1 N N S N N N 60.322 6.544  6.292  -1.115 -1.312 0.069  CA   LEU 18 
2ZF C5   C12 C 0 1 N N N N N N 61.562 7.265  5.770  -2.264 -0.386 0.379  C    LEU 19 
2ZF O3   O8  O 0 1 N N N N N N 62.085 6.924  4.704  -2.100 0.554  1.127  O    LEU 20 
2ZF CB1  C13 C 0 1 N N N N N N 60.700 5.187  6.900  -1.326 -2.645 0.792  CB   LEU 21 
2ZF CG1  C14 C 0 1 N N N N N N 59.524 4.457  7.560  -2.553 -3.351 0.213  CG   LEU 22 
2ZF CD1  C15 C 0 1 N N N N N N 59.871 3.193  8.352  -2.276 -3.748 -1.238 CD1  LEU 23 
2ZF CD2  C16 C 0 1 N N N N N N 58.657 5.405  8.370  -2.856 -4.604 1.036  CD2  LEU 24 
2ZF N2   N3  N 0 1 N N N N N N 61.886 8.444  6.394  -3.473 -0.603 -0.176 N    FKI 25 
2ZF CA2  C17 C 0 1 N N S N N N 63.141 9.055  6.124  -4.557 0.359  0.032  CA   FKI 26 
2ZF C6   C18 C 0 1 N N N N N N 64.176 9.119  7.332  -5.884 -0.338 -0.123 C    FKI 27 
2ZF O4   O10 O 0 1 N N N N N N 64.292 7.745  7.793  -5.936 -1.429 -0.639 O    FKI 28 
2ZF CB2  C19 C 0 1 N N N N N N 63.513 10.234 5.239  -4.448 1.483  -1.000 CB   FKI 29 
2ZF CG2  C20 C 0 1 N N N N N N 62.557 10.634 4.069  -3.157 2.270  -0.763 CG   FKI 30 
2ZF F1   F1  F 0 1 N N N N N N 61.286 10.492 4.492  -2.999 3.223  -1.774 F1   FKI 31 
2ZF F2   F2  F 0 1 N N N N N N 62.714 9.835  2.986  -3.225 2.913  0.478  F2   FKI 32 
2ZF CD3  C21 C 0 1 N N N N N N 65.549 9.462  6.595  -7.132 0.318  0.360  CD   FKI 33 
2ZF OE11 O11 O 0 0 N N N N N N 65.877 8.845  5.588  -8.317 -0.304 0.221  OE1  FKI 34 
2ZF OE21 O12 O 0 0 N N N N N N 66.275 10.285 7.122  -7.080 1.414  0.878  OE2  FKI 35 
2ZF H11  H1  H 0 1 N N N N N N 52.347 8.305  6.506  7.133  -2.891 0.860  H11  BOC 36 
2ZF H12  H2  H 0 1 N N N N N N 52.783 8.976  4.898  8.363  -1.759 1.470  H12  BOC 37 
2ZF H13  H3  H 0 1 N N N N N N 51.596 7.633  5.020  6.636  -1.434 1.754  H13  BOC 38 
2ZF H21  H4  H 0 1 N N N N N N 52.951 5.888  3.634  8.260  -1.074 -2.188 H21  BOC 39 
2ZF H22  H5  H 0 1 N N N N N N 53.785 4.918  4.895  9.311  -1.548 -0.832 H22  BOC 40 
2ZF H23  H6  H 0 1 N N N N N N 52.118 5.523  5.183  8.081  -2.681 -1.442 H23  BOC 41 
2ZF H31  H7  H 0 1 N N N N N N 55.335 6.712  6.668  6.887  0.821  0.708  H31  BOC 42 
2ZF H32  H8  H 0 1 N N N N N N 53.955 7.598  7.402  8.614  0.496  0.423  H32  BOC 43 
2ZF H33  H9  H 0 1 N N N N N N 53.838 5.827  7.119  7.563  0.970  -0.932 H33  BOC 44 
2ZF H    H11 H 0 1 N N N N N N 56.499 8.627  3.357  3.497  -1.172 -1.405 H    GLU 45 
2ZF HA   H13 H 0 1 N N N N N N 57.776 6.014  3.154  2.779  -0.478 1.339  HA   GLU 46 
2ZF HB2  H14 H 0 1 N N N N N N 58.075 6.986  1.090  2.274  1.410  -1.004 HB2  GLU 47 
2ZF HB3  H15 H 0 1 N N N N N N 58.873 8.410  1.753  1.520  1.567  0.601  HB3  GLU 48 
2ZF HG2  H16 H 0 1 N N N N N N 60.839 7.178  2.398  3.765  1.751  1.638  HG2  GLU 49 
2ZF HG3  H17 H 0 1 N N N N N N 59.920 5.661  2.656  4.519  1.594  0.033  HG3  GLU 50 
2ZF HE2  H18 H 0 1 N N N N N N 61.134 6.809  -0.905 4.298  5.216  0.561  HE2  GLU 51 
2ZF H1   H20 H 0 1 N N N N N N 59.391 5.443  4.675  0.135  -0.087 1.271  H    LEU 52 
2ZF HA1  H22 H 0 1 N N N N N N 59.797 7.097  7.085  -1.068 -1.486 -1.006 HA   LEU 53 
2ZF HB21 H23 H 0 0 N N N N N N 61.089 4.548  6.093  -0.446 -3.274 0.656  HB2  LEU 54 
2ZF HB31 H24 H 0 0 N N N N N N 61.443 5.381  7.687  -1.480 -2.461 1.855  HB3  LEU 55 
2ZF HG   H25 H 0 1 N N N N N N 58.942 4.079  6.706  -3.410 -2.678 0.248  HG   LEU 56 
2ZF HD11 H26 H 0 0 N N N N N N 59.954 2.339  7.663  -3.174 -4.185 -1.673 HD11 LEU 57 
2ZF HD12 H27 H 0 0 N N N N N N 60.829 3.338  8.873  -1.988 -2.865 -1.808 HD12 LEU 58 
2ZF HD13 H28 H 0 0 N N N N N N 59.079 2.993  9.089  -1.467 -4.478 -1.266 HD13 LEU 59 
2ZF HD21 H29 H 0 0 N N N N N N 58.447 4.961  9.354  -3.054 -4.321 2.070  HD21 LEU 60 
2ZF HD22 H30 H 0 0 N N N N N N 59.185 6.360  8.504  -3.730 -5.107 0.624  HD22 LEU 61 
2ZF HD23 H31 H 0 0 N N N N N N 57.710 5.581  7.838  -1.999 -5.278 1.002  HD23 LEU 62 
2ZF H14  H34 H 0 1 N N N N N N 61.245 8.869  7.033  -3.624 -1.396 -0.713 H1   FKI 63 
2ZF HA2  H35 H 0 1 N N N N N N 63.116 8.258  5.367  -4.483 0.779  1.035  HA   FKI 64 
2ZF HB22 H36 H 0 0 N N N N N N 63.579 11.111 5.900  -4.433 1.055  -2.003 HB2  FKI 65 
2ZF HB1  H37 H 0 1 N N N N N N 64.436 9.912  4.735  -5.303 2.151  -0.903 HB1  FKI 66 
2ZF HG1  H38 H 0 1 N N N N N N 62.792 11.670 3.782  -2.308 1.586  -0.772 HG   FKI 67 
2ZF HE1  H39 H 0 1 N N N N N N 66.747 9.116  5.319  -9.099 0.161  0.549  HE1  FKI 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
2ZF O1   C    DOUB N N 1  
2ZF C    O2   SING N N 2  
2ZF O2   CT   SING N N 3  
2ZF CT   C1   SING N N 4  
2ZF CT   C2   SING N N 5  
2ZF CT   C3   SING N N 6  
2ZF C1   H11  SING N N 7  
2ZF C1   H12  SING N N 8  
2ZF C1   H13  SING N N 9  
2ZF C2   H21  SING N N 10 
2ZF C2   H22  SING N N 11 
2ZF C2   H23  SING N N 12 
2ZF C3   H31  SING N N 13 
2ZF C3   H32  SING N N 14 
2ZF C3   H33  SING N N 15 
2ZF N    CA   SING N N 16 
2ZF N    H    SING N N 17 
2ZF CA   C4   SING N N 18 
2ZF CA   CB   SING N N 19 
2ZF CA   HA   SING N N 20 
2ZF C4   O    DOUB N N 21 
2ZF CB   CG   SING N N 22 
2ZF CB   HB2  SING N N 23 
2ZF CB   HB3  SING N N 24 
2ZF CG   CD   SING N N 25 
2ZF CG   HG2  SING N N 26 
2ZF CG   HG3  SING N N 27 
2ZF CD   OE1  DOUB N N 28 
2ZF CD   OE2  SING N N 29 
2ZF OE2  HE2  SING N N 30 
2ZF N1   CA1  SING N N 31 
2ZF N1   H1   SING N N 32 
2ZF CA1  C5   SING N N 33 
2ZF CA1  CB1  SING N N 34 
2ZF CA1  HA1  SING N N 35 
2ZF C5   O3   DOUB N N 36 
2ZF CB1  CG1  SING N N 37 
2ZF CB1  HB21 SING N N 38 
2ZF CB1  HB31 SING N N 39 
2ZF CG1  CD1  SING N N 40 
2ZF CG1  CD2  SING N N 41 
2ZF CG1  HG   SING N N 42 
2ZF CD1  HD11 SING N N 43 
2ZF CD1  HD12 SING N N 44 
2ZF CD1  HD13 SING N N 45 
2ZF CD2  HD21 SING N N 46 
2ZF CD2  HD22 SING N N 47 
2ZF CD2  HD23 SING N N 48 
2ZF N2   CA2  SING N N 49 
2ZF N2   H14  SING N N 50 
2ZF CA2  C6   SING N N 51 
2ZF CA2  CB2  SING N N 52 
2ZF CA2  HA2  SING N N 53 
2ZF C6   O4   DOUB N N 54 
2ZF C6   CD3  SING N N 55 
2ZF CB2  CG2  SING N N 56 
2ZF CB2  HB22 SING N N 57 
2ZF CB2  HB1  SING N N 58 
2ZF CG2  F1   SING N N 59 
2ZF CG2  F2   SING N N 60 
2ZF CG2  HG1  SING N N 61 
2ZF CD3  OE11 SING N N 62 
2ZF CD3  OE21 DOUB N N 63 
2ZF OE11 HE1  SING N N 64 
2ZF C    N    SING N N 65 
2ZF C4   N1   SING N N 66 
2ZF C5   N2   SING N N 67 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
2ZF SMILES           ACDLabs 10.04 "O=C(OC(C)(C)C)NC(C(=O)NC(C(=O)NC(C(=O)C(=O)O)CC(F)F)CC(C)C)CCC(=O)O"                                                                                                                                         
2ZF SMILES_CANONICAL CACTVS  3.352 "CC(C)C[C@H](NC(=O)[C@H](CCC(O)=O)NC(=O)OC(C)(C)C)C(=O)N[C@@H](CC(F)F)C(=O)C(O)=O"                                                                                                                            
2ZF SMILES           CACTVS  3.352 "CC(C)C[CH](NC(=O)[CH](CCC(O)=O)NC(=O)OC(C)(C)C)C(=O)N[CH](CC(F)F)C(=O)C(O)=O"                                                                                                                                
2ZF InChI            InChI   1.03  "InChI=1S/C21H33F2N3O9/c1-10(2)8-13(18(31)24-12(9-14(22)23)16(29)19(32)33)25-17(30)11(6-7-15(27)28)26-20(34)35-21(3,4)5/h10-14H,6-9H2,1-5H3,(H,24,31)(H,25,30)(H,26,34)(H,27,28)(H,32,33)/t11-,12-,13-/m0/s1" 
2ZF InChIKey         InChI   1.03  WXVMZATZAOHPFR-AVGNSLFASA-N                                                                                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
2ZF "SYSTEMATIC NAME" ACDLabs              10.04 "N-(tert-butoxycarbonyl)-L-alpha-glutamyl-N-[(1R)-1-(carboxycarbonyl)-3,3-difluoropropyl]-L-leucinamide"                                                        
2ZF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(3S)-5,5-difluoro-3-[[(2S)-2-[[(2S)-5-hydroxy-2-[(2-methylpropan-2-yl)oxycarbonylamino]-5-oxo-pentanoyl]amino]-4-methyl-pentanoyl]amino]-2-oxo-pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
2ZF "Create component"  2008-12-12 RCSB 
2ZF "Modify descriptor" 2011-06-04 RCSB 
2ZF "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            2ZF 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C6 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
