data_79F
# 
_chem_comp.id                                    79F 
_chem_comp.name                                  "(2~{S})-4-methyl-2-[[(2~{S})-3-oxidanyl-2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]propanoyl]amino]pentanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H28 N3 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-09-16 
_chem_comp.pdbx_modified_date                    2017-08-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        445.404 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     79F 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5LVD 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
79F C2  C1  C 0 1 Y N N 16.249 41.425 -10.570 7.174  -1.672 0.812  C2  79F 1  
79F C3  C2  C 0 1 Y N N 17.527 41.088 -11.026 8.432  -1.789 1.372  C3  79F 2  
79F C8  C3  C 0 1 Y N N 15.102 41.186 -11.344 6.994  -0.912 -0.329 C8  79F 3  
79F C9  C4  C 0 1 N N N 13.698 41.580 -10.853 5.624  -0.789 -0.944 C9  79F 4  
79F C13 C5  C 0 1 N N N 12.733 40.836 -8.874  3.690  0.604  -0.813 C13 79F 5  
79F C24 C6  C 0 1 N N N 8.891  39.538 -3.773  -3.304 0.378  -0.187 C24 79F 6  
79F N25 N1  N 0 1 N N N 9.186  40.804 -4.104  -4.355 -0.218 0.411  N25 79F 7  
79F C27 C7  C 0 1 N N N 7.463  42.205 -2.978  -6.209 -1.811 0.342  C27 79F 8  
79F C33 C8  C 0 1 N N N 7.705  44.026 -1.187  -5.948 -4.107 1.292  C33 79F 9  
79F C4  C9  C 0 1 Y N N 17.679 40.504 -12.294 9.509  -1.142 0.796  C4  79F 10 
79F C5  C10 C 0 1 Y N N 16.535 40.277 -13.072 9.328  -0.377 -0.342 C5  79F 11 
79F C6  C11 C 0 1 Y N N 15.258 40.624 -12.604 8.071  -0.265 -0.906 C6  79F 12 
79F C17 C12 C 0 1 N N N 12.064 40.203 -6.615  1.640  1.921  -0.804 C17 79F 13 
79F P18 P1  P 0 1 N N N 11.532 38.629 -5.899  0.428  1.147  0.315  P18 79F 14 
79F O19 O1  O 0 1 N N N 10.191 38.209 -6.487  0.654  -0.316 0.351  O19 79F 15 
79F O20 O2  O 0 1 N N N 12.586 37.580 -6.103  0.601  1.753  1.796  O20 79F 16 
79F N21 N2  N 0 1 N N N 11.261 39.011 -4.283  -1.129 1.460  -0.241 N21 79F 17 
79F C23 C13 C 0 1 N N S 10.041 38.582 -3.582  -2.135 0.850  0.638  C23 79F 18 
79F O45 O3  O 0 1 N N N 7.745  39.136 -3.593  -3.300 0.535  -1.390 O45 79F 19 
79F C47 C14 C 0 1 N N N 10.342 38.419 -2.082  -2.616 1.884  1.659  C47 79F 20 
79F O50 O4  O 0 1 N N N 10.844 37.083 -1.874  -3.298 2.941  0.980  O50 79F 21 
79F O12 O5  O 0 1 N N N 13.530 40.500 -9.881  4.936  0.353  -0.368 O12 79F 22 
79F O14 O6  O 0 1 N N N 12.035 41.827 -8.907  3.191  -0.112 -1.660 O14 79F 23 
79F N15 N3  N 0 1 N N N 12.829 39.967 -7.850  2.996  1.648  -0.320 N15 79F 24 
79F C26 C15 C 0 1 N N S 8.030  41.672 -4.315  -5.491 -0.677 -0.392 C26 79F 25 
79F C28 C16 C 0 1 N N N 8.444  43.110 -2.194  -5.277 -3.019 0.451  C28 79F 26 
79F C29 C17 C 0 1 N N N 9.404  42.220 -1.363  -4.984 -3.565 -0.948 C29 79F 27 
79F C41 C18 C 0 1 N N N 8.416  42.734 -5.323  -6.448 0.467  -0.608 C41 79F 28 
79F O42 O7  O 0 1 N N N 7.532  43.549 -5.670  -7.570 0.279  -1.321 O42 79F 29 
79F O43 O8  O 0 1 N N N 9.581  42.755 -5.822  -6.206 1.554  -0.139 O43 79F 30 
79F H1  H1  H 0 1 N N N 16.141 41.881 -9.597  6.333  -2.177 1.262  H1  79F 31 
79F H2  H2  H 0 1 N N N 18.392 41.276 -10.407 8.574  -2.386 2.261  H2  79F 32 
79F H3  H3  H 0 1 N N N 13.682 42.574 -10.382 5.720  -0.650 -2.021 H3  79F 33 
79F H4  H4  H 0 1 N N N 12.947 41.542 -11.656 5.053  -1.696 -0.744 H4  79F 34 
79F H5  H5  H 0 1 N N N 10.127 41.129 -4.199  -4.358 -0.344 1.373  H5  79F 35 
79F H6  H6  H 0 1 N N N 6.554  42.786 -3.195  -6.490 -1.477 1.341  H6  79F 36 
79F H7  H7  H 0 1 N N N 7.205  41.344 -2.344  -7.105 -2.092 -0.211 H7  79F 37 
79F H8  H8  H 0 1 N N N 8.437  44.650 -0.653  -6.881 -4.410 0.817  H8  79F 38 
79F H9  H9  H 0 1 N N N 6.999  44.672 -1.729  -5.284 -4.968 1.370  H9  79F 39 
79F H10 H10 H 0 1 N N N 7.155  43.407 -0.464  -6.157 -3.718 2.289  H10 79F 40 
79F H11 H11 H 0 1 N N N 18.658 40.235 -12.663 10.492 -1.233 1.234  H11 79F 41 
79F H12 H12 H 0 1 N N N 16.638 39.827 -14.048 10.169 0.129  -0.792 H12 79F 42 
79F H13 H13 H 0 1 N N N 14.393 40.453 -13.227 7.929  0.333  -1.794 H13 79F 43 
79F H14 H14 H 0 1 N N N 12.698 40.736 -5.891  1.523  1.511  -1.807 H14 79F 44 
79F H15 H15 H 0 1 N N N 11.179 40.814 -6.847  1.474  2.998  -0.831 H15 79F 45 
79F H16 H16 H 0 1 N N N 12.212 36.841 -6.568  0.467  2.709  1.848  H16 79F 46 
79F H17 H17 H 0 1 N N N 12.029 38.628 -3.771  -1.286 2.452  -0.336 H17 79F 47 
79F H18 H18 H 0 1 N N N 9.738  37.599 -3.973  -1.694 0.001  1.161  H18 79F 48 
79F H19 H19 H 0 1 N N N 11.098 39.155 -1.770  -3.295 1.408  2.366  H19 79F 49 
79F H20 H20 H 0 1 N N N 9.422  38.568 -1.498  -1.758 2.290  2.195  H20 79F 50 
79F H21 H21 H 0 1 N N N 11.038 36.957 -0.953  -3.631 3.634  1.567  H21 79F 51 
79F H22 H22 H 0 1 N N N 13.419 39.163 -7.928  3.394  2.219  0.356  H22 79F 52 
79F H23 H23 H 0 1 N N N 7.236  41.065 -4.775  -5.133 -1.038 -1.356 H23 79F 53 
79F H24 H24 H 0 1 N N N 9.025  43.725 -2.898  -4.344 -2.716 0.926  H24 79F 54 
79F H25 H25 H 0 1 N N N 10.104 42.858 -0.803  -4.506 -2.789 -1.547 H25 79F 55 
79F H26 H26 H 0 1 N N N 8.820  41.610 -0.658  -4.319 -4.425 -0.870 H26 79F 56 
79F H27 H27 H 0 1 N N N 9.969  41.560 -2.038  -5.917 -3.867 -1.423 H27 79F 57 
79F H28 H28 H 0 1 N N N 7.883  44.137 -6.328  -8.153 1.042  -1.432 H28 79F 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
79F C5  C6  DOUB Y N 1  
79F C5  C4  SING Y N 2  
79F C6  C8  SING Y N 3  
79F C4  C3  DOUB Y N 4  
79F C8  C9  SING N N 5  
79F C8  C2  DOUB Y N 6  
79F C3  C2  SING Y N 7  
79F C9  O12 SING N N 8  
79F O12 C13 SING N N 9  
79F O14 C13 DOUB N N 10 
79F C13 N15 SING N N 11 
79F N15 C17 SING N N 12 
79F C17 P18 SING N N 13 
79F O19 P18 DOUB N N 14 
79F O20 P18 SING N N 15 
79F P18 N21 SING N N 16 
79F O43 C41 DOUB N N 17 
79F O42 C41 SING N N 18 
79F C41 C26 SING N N 19 
79F C26 N25 SING N N 20 
79F C26 C27 SING N N 21 
79F N21 C23 SING N N 22 
79F N25 C24 SING N N 23 
79F C24 O45 DOUB N N 24 
79F C24 C23 SING N N 25 
79F C23 C47 SING N N 26 
79F C27 C28 SING N N 27 
79F C28 C29 SING N N 28 
79F C28 C33 SING N N 29 
79F C47 O50 SING N N 30 
79F C2  H1  SING N N 31 
79F C3  H2  SING N N 32 
79F C9  H3  SING N N 33 
79F C9  H4  SING N N 34 
79F N25 H5  SING N N 35 
79F C27 H6  SING N N 36 
79F C27 H7  SING N N 37 
79F C33 H8  SING N N 38 
79F C33 H9  SING N N 39 
79F C33 H10 SING N N 40 
79F C4  H11 SING N N 41 
79F C5  H12 SING N N 42 
79F C6  H13 SING N N 43 
79F C17 H14 SING N N 44 
79F C17 H15 SING N N 45 
79F O20 H16 SING N N 46 
79F N21 H17 SING N N 47 
79F C23 H18 SING N N 48 
79F C47 H19 SING N N 49 
79F C47 H20 SING N N 50 
79F O50 H21 SING N N 51 
79F N15 H22 SING N N 52 
79F C26 H23 SING N N 53 
79F C28 H24 SING N N 54 
79F C29 H25 SING N N 55 
79F C29 H26 SING N N 56 
79F C29 H27 SING N N 57 
79F O42 H28 SING N N 58 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
79F InChI            InChI                1.03  "InChI=1S/C18H28N3O8P/c1-12(2)8-14(17(24)25)20-16(23)15(9-22)21-30(27,28)11-19-18(26)29-10-13-6-4-3-5-7-13/h3-7,12,14-15,22H,8-11H2,1-2H3,(H,19,26)(H,20,23)(H,24,25)(H2,21,27,28)/t14-,15-/m0/s1" 
79F InChIKey         InChI                1.03  SSYZVHUEGYLORV-GJZGRUSLSA-N                                                                                                                                                                        
79F SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](NC(=O)[C@H](CO)N[P](O)(=O)CNC(=O)OCc1ccccc1)C(O)=O"                                                                                                                                   
79F SMILES           CACTVS               3.385 "CC(C)C[CH](NC(=O)[CH](CO)N[P](O)(=O)CNC(=O)OCc1ccccc1)C(O)=O"                                                                                                                                     
79F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "CC(C)C[C@@H](C(=O)O)NC(=O)[C@H](CO)NP(=O)(CNC(=O)OCc1ccccc1)O"                                                                                                                                    
79F SMILES           "OpenEye OEToolkits" 2.0.5 "CC(C)CC(C(=O)O)NC(=O)C(CO)NP(=O)(CNC(=O)OCc1ccccc1)O"                                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
79F "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.5 "(2~{S})-4-methyl-2-[[(2~{S})-3-oxidanyl-2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]propanoyl]amino]pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
79F "Create component" 2016-09-16 EBI  
79F "Initial release"  2017-08-16 RCSB 
# 
