data_80F
# 
_chem_comp.id                                    80F 
_chem_comp.name                                  
;(2R)-3-[[(4S)-3-aminocarbonyl-1-[(2R,3R,4S,5R)-5-[[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-3,4-bis(oxidanyl)oxolan-2-yl]-4H-pyridin-4-yl]sulfanyl]-2-azanyl-propanoic acid
;
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H34 N8 O16 P2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-03-07 
_chem_comp.pdbx_modified_date                    2018-04-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        784.583 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     80F 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5X9D 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
80F PA  P1  P 0 1 N N N -9.759  -25.172 -27.253 1.658  0.276  -2.347 PA  80F 1  
80F O1A O1  O 0 1 N N N -8.476  -25.815 -26.777 2.316  -0.234 -3.570 O1A 80F 2  
80F O2A O2  O 0 1 N N N -10.807 -25.117 -26.193 0.745  1.549  -2.720 O2A 80F 3  
80F O5B O3  O 0 1 N N N -10.238 -25.948 -28.554 2.778  0.714  -1.277 O5B 80F 4  
80F C5B C1  C 0 1 N N N -9.293  -26.129 -29.603 3.818  1.647  -1.577 C5B 80F 5  
80F C4B C2  C 0 1 N N R -10.018 -26.239 -30.933 4.705  1.836  -0.345 C4B 80F 6  
80F O4B O4  O 0 1 N N N -9.089  -26.688 -31.920 5.472  0.640  -0.090 O4B 80F 7  
80F C3B C3  C 0 1 N N S -11.129 -27.277 -30.898 5.760  2.934  -0.605 C3B 80F 8  
80F O3B O5  O 0 1 N N N -12.175 -26.857 -31.783 5.335  4.179  -0.047 O3B 80F 9  
80F C2B C4  C 0 1 N N R -10.469 -28.524 -31.442 7.025  2.417  0.116  C2B 80F 10 
80F O2B O6  O 0 1 N N N -11.417 -29.424 -32.027 7.424  3.328  1.142  O2B 80F 11 
80F C1B C5  C 0 1 N N R -9.493  -27.947 -32.453 6.584  1.068  0.726  C1B 80F 12 
80F N9A N1  N 0 1 Y N N -8.302  -28.808 -32.613 7.676  0.094  0.652  N9A 80F 13 
80F C8A C6  C 0 1 Y N N -7.316  -28.971 -31.704 7.897  -0.794 -0.358 C8A 80F 14 
80F N7A N2  N 0 1 Y N N -6.375  -29.808 -32.174 8.955  -1.508 -0.100 N7A 80F 15 
80F C5A C7  C 0 1 Y N N -6.750  -30.191 -33.402 9.478  -1.124 1.089  C5A 80F 16 
80F C6A C8  C 0 1 Y N N -6.200  -31.092 -34.444 10.584 -1.524 1.858  C6A 80F 17 
80F N6A N3  N 0 1 N N N -5.031  -31.741 -34.234 11.422 -2.535 1.420  N6A 80F 18 
80F N1A N4  N 0 1 Y N N -6.905  -31.227 -35.590 10.807 -0.909 3.015  N1A 80F 19 
80F C2A C9  C 0 1 Y N N -8.081  -30.583 -35.805 10.013 0.056  3.441  C2A 80F 20 
80F N3A N5  N 0 1 Y N N -8.634  -29.750 -34.893 8.966  0.465  2.755  N3A 80F 21 
80F C4A C10 C 0 1 Y N N -8.024  -29.524 -33.699 8.667  -0.088 1.584  C4A 80F 22 
80F O3  O7  O 0 1 N N N -9.384  -23.718 -27.786 0.733  -0.880 -1.713 O3  80F 23 
80F PN  P2  P 0 1 N N N -9.542  -22.287 -27.096 -0.246 -1.996 -2.336 PN  80F 24 
80F O1N O8  O 0 1 N N N -9.825  -22.321 -25.624 0.627  -3.241 -2.866 O1N 80F 25 
80F O2N O9  O 0 1 N N N -10.643 -21.599 -27.850 -1.007 -1.412 -3.462 O2N 80F 26 
80F O5D O10 O 0 1 N N N -8.135  -21.570 -27.378 -1.270 -2.504 -1.202 O5D 80F 27 
80F C5D C11 C 0 1 N N N -7.487  -21.713 -28.639 -2.334 -3.420 -1.468 C5D 80F 28 
80F C4D C12 C 0 1 N N R -6.074  -21.139 -28.594 -3.111 -3.689 -0.178 C4D 80F 29 
80F O4D O11 O 0 1 N N N -6.072  -19.791 -28.103 -3.782 -2.491 0.248  O4D 80F 30 
80F C3D C13 C 0 1 N N S -5.196  -21.958 -27.666 -4.193 -4.756 -0.430 C3D 80F 31 
80F O3D O12 O 0 1 N N N -4.009  -22.315 -28.389 -3.978 -5.895 0.407  O3D 80F 32 
80F C2D C14 C 0 1 N N R -4.891  -21.017 -26.509 -5.518 -4.050 -0.053 C2D 80F 33 
80F O2D O13 O 0 1 N N N -3.585  -21.260 -25.967 -6.382 -4.935 0.662  O2D 80F 34 
80F C1D C15 C 0 1 N N R -5.048  -19.613 -27.108 -5.024 -2.900 0.861  C1D 80F 35 
80F N1N N6  N 0 1 N N N -5.314  -18.548 -26.083 -5.985 -1.794 0.865  N1N 80F 36 
80F C2N C16 C 0 1 N N N -6.579  -18.667 -25.486 -6.579 -1.410 2.034  C2N 80F 37 
80F C3N C17 C 0 1 N N N -6.841  -17.816 -24.469 -7.177 -0.209 2.133  C3N 80F 38 
80F C7N C18 C 0 1 N N N -8.060  -17.957 -23.642 -7.793 0.161  3.351  C7N 80F 39 
80F O7N O14 O 0 1 N N N -8.553  -16.998 -23.069 -7.779 -0.605 4.297  O7N 80F 40 
80F C4N C19 C 0 1 N N S -5.748  -16.799 -24.288 -7.203 0.748  0.975  C4N 80F 41 
80F C5N C20 C 0 1 N N N -5.279  -16.171 -25.573 -6.862 0.047  -0.308 C5N 80F 42 
80F C6N C21 C 0 1 N N N -5.026  -17.198 -26.448 -6.288 -1.135 -0.319 C6N 80F 43 
80F OXT O15 O 0 1 N N N -4.590  -18.321 -18.750 -5.016 5.034  -2.389 OXT 80F 44 
80F C   C22 C 0 1 N N N -3.956  -18.077 -19.800 -5.547 5.315  -1.189 C   80F 45 
80F O   O16 O 0 1 N N N -3.204  -17.079 -19.922 -6.210 6.314  -1.040 O   80F 46 
80F CA  C23 C 0 1 N N R -4.105  -19.016 -20.965 -5.318 4.383  -0.027 CA  80F 47 
80F N   N7  N 0 1 N N N -4.652  -20.324 -20.541 -5.562 5.100  1.232  N   80F 48 
80F CB  C24 C 0 1 N N N -5.122  -18.438 -21.930 -6.274 3.193  -0.130 CB  80F 49 
80F SG  S1  S 0 1 N N N -4.421  -17.190 -22.954 -5.998 2.072  1.269  SG  80F 50 
80F N7N N8  N 0 1 N N N -8.600  -19.179 -23.535 -8.396 1.361  3.465  N7N 80F 51 
80F H1  H1  H 0 1 N N N -10.470 -25.505 -25.394 0.282  1.936  -1.964 H1  80F 52 
80F H2  H2  H 0 1 N N N -8.719  -27.050 -29.423 4.419  1.268  -2.403 H2  80F 53 
80F H3  H3  H 0 1 N N N -8.608  -25.269 -29.630 3.377  2.604  -1.858 H3  80F 54 
80F H4  H4  H 0 1 N N N -10.438 -25.260 -31.206 4.097  2.092  0.523  H4  80F 55 
80F H5  H5  H 0 1 N N N -11.489 -27.435 -29.871 5.946  3.040  -1.674 H5  80F 56 
80F H6  H6  H 0 1 N N N -12.587 -26.074 -31.438 5.961  4.904  -0.181 H6  80F 57 
80F H7  H7  H 0 1 N N N -9.908  -29.022 -30.637 7.836  2.267  -0.597 H7  80F 58 
80F H8  H8  H 0 1 N N N -12.000 -29.753 -31.353 7.654  4.209  0.818  H8  80F 59 
80F H9  H9  H 0 1 N N N -9.999  -27.818 -33.421 6.267  1.205  1.760  H9  80F 60 
80F H10 H10 H 0 1 N N N -7.288  -28.495 -30.735 7.286  -0.892 -1.243 H10 80F 61 
80F H11 H11 H 0 1 N N N -4.810  -32.298 -35.035 11.248 -2.976 0.574  H11 80F 62 
80F H12 H12 H 0 1 N N N -4.302  -31.074 -34.081 12.182 -2.802 1.960  H12 80F 63 
80F H13 H13 H 0 1 N N N -8.596  -30.742 -36.741 10.231 0.529  4.387  H13 80F 64 
80F H14 H14 H 0 1 N N N -10.657 -21.895 -25.451 1.153  -3.673 -2.180 H14 80F 65 
80F H15 H15 H 0 1 N N N -8.068  -21.179 -29.405 -3.005 -2.991 -2.213 H15 80F 66 
80F H16 H16 H 0 1 N N N -7.434  -22.781 -28.897 -1.923 -4.356 -1.847 H16 80F 67 
80F H17 H17 H 0 1 N N N -5.647  -21.171 -29.607 -2.428 -4.028 0.602  H17 80F 68 
80F H18 H18 H 0 1 N N N -5.737  -22.846 -27.307 -4.202 -5.050 -1.480 H18 80F 69 
80F H19 H19 H 0 1 N N N -3.440  -22.830 -27.829 -4.631 -6.598 0.289  H19 80F 70 
80F H20 H20 H 0 1 N N N -5.654  -21.154 -25.729 -6.015 -3.656 -0.940 H20 80F 71 
80F H21 H21 H 0 1 N N N -3.423  -20.660 -25.249 -6.646 -5.718 0.160  H21 80F 72 
80F H22 H22 H 0 1 N N N -4.104  -19.364 -27.615 -4.851 -3.263 1.874  H22 80F 73 
80F H23 H23 H 0 1 N N N -7.302  -19.397 -25.820 -6.569 -2.075 2.885  H23 80F 74 
80F H24 H24 H 0 1 N N N -6.273  -15.969 -23.793 -8.199 1.183  0.891  H24 80F 75 
80F H25 H25 H 0 1 N N N -5.164  -15.115 -25.769 -7.092 0.528  -1.247 H25 80F 76 
80F H27 H27 H 0 1 N N N -4.606  -16.983 -27.420 -6.052 -1.601 -1.264 H27 80F 77 
80F H29 H29 H 0 1 N N N -4.405  -17.649 -18.104 -5.190 5.662  -3.104 H29 80F 78 
80F H30 H30 H 0 1 N N N -3.138  -19.148 -21.472 -4.288 4.025  -0.046 H30 80F 79 
80F H31 H31 H 0 1 N N N -4.020  -20.757 -19.898 -6.511 5.443  1.274  H31 80F 80 
80F H32 H32 H 0 1 N N N -5.537  -20.187 -20.097 -5.353 4.516  2.027  H32 80F 81 
80F H34 H34 H 0 1 N N N -5.951  -18.001 -21.354 -7.303 3.552  -0.111 H34 80F 82 
80F H35 H35 H 0 1 N N N -5.506  -19.247 -22.568 -6.092 2.661  -1.064 H35 80F 83 
80F H36 H36 H 0 1 N N N -9.420  -19.316 -22.979 -8.407 1.972  2.711  H36 80F 84 
80F H37 H37 H 0 1 N N N -8.183  -19.953 -24.011 -8.818 1.615  4.300  H37 80F 85 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
80F C2A N1A DOUB Y N 1  
80F C2A N3A SING Y N 2  
80F N1A C6A SING Y N 3  
80F N3A C4A DOUB Y N 4  
80F C6A N6A SING N N 5  
80F C6A C5A DOUB Y N 6  
80F C4A C5A SING Y N 7  
80F C4A N9A SING Y N 8  
80F C5A N7A SING Y N 9  
80F N9A C1B SING N N 10 
80F N9A C8A SING Y N 11 
80F C1B O4B SING N N 12 
80F C1B C2B SING N N 13 
80F N7A C8A DOUB Y N 14 
80F O2B C2B SING N N 15 
80F O4B C4B SING N N 16 
80F O3B C3B SING N N 17 
80F C2B C3B SING N N 18 
80F C4B C3B SING N N 19 
80F C4B C5B SING N N 20 
80F C5B O5B SING N N 21 
80F C5D C4D SING N N 22 
80F C5D O5D SING N N 23 
80F C4D O4D SING N N 24 
80F C4D C3D SING N N 25 
80F O5B PA  SING N N 26 
80F O3D C3D SING N N 27 
80F O4D C1D SING N N 28 
80F O2N PN  DOUB N N 29 
80F O3  PA  SING N N 30 
80F O3  PN  SING N N 31 
80F C3D C2D SING N N 32 
80F O5D PN  SING N N 33 
80F PA  O1A DOUB N N 34 
80F PA  O2A SING N N 35 
80F C1D C2D SING N N 36 
80F C1D N1N SING N N 37 
80F PN  O1N SING N N 38 
80F C2D O2D SING N N 39 
80F C6N N1N SING N N 40 
80F C6N C5N DOUB N N 41 
80F N1N C2N SING N N 42 
80F C5N C4N SING N N 43 
80F C2N C3N DOUB N N 44 
80F C3N C4N SING N N 45 
80F C3N C7N SING N N 46 
80F C4N SG  SING N N 47 
80F C7N N7N SING N N 48 
80F C7N O7N DOUB N N 49 
80F SG  CB  SING N N 50 
80F CB  CA  SING N N 51 
80F CA  N   SING N N 52 
80F CA  C   SING N N 53 
80F O   C   DOUB N N 54 
80F C   OXT SING N N 55 
80F O2A H1  SING N N 56 
80F C5B H2  SING N N 57 
80F C5B H3  SING N N 58 
80F C4B H4  SING N N 59 
80F C3B H5  SING N N 60 
80F O3B H6  SING N N 61 
80F C2B H7  SING N N 62 
80F O2B H8  SING N N 63 
80F C1B H9  SING N N 64 
80F C8A H10 SING N N 65 
80F N6A H11 SING N N 66 
80F N6A H12 SING N N 67 
80F C2A H13 SING N N 68 
80F O1N H14 SING N N 69 
80F C5D H15 SING N N 70 
80F C5D H16 SING N N 71 
80F C4D H17 SING N N 72 
80F C3D H18 SING N N 73 
80F O3D H19 SING N N 74 
80F C2D H20 SING N N 75 
80F O2D H21 SING N N 76 
80F C1D H22 SING N N 77 
80F C2N H23 SING N N 78 
80F C4N H24 SING N N 79 
80F C5N H25 SING N N 80 
80F C6N H27 SING N N 81 
80F OXT H29 SING N N 82 
80F CA  H30 SING N N 83 
80F N   H31 SING N N 84 
80F N   H32 SING N N 85 
80F CB  H34 SING N N 86 
80F CB  H35 SING N N 87 
80F N7N H36 SING N N 88 
80F N7N H37 SING N N 89 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
80F InChI            InChI                1.03  
;InChI=1S/C24H34N8O16P2S/c25-10(24(38)39)6-51-13-1-2-31(3-9(13)20(27)37)22-17(35)15(33)11(46-22)4-44-49(40,41)48-50(42,43)45-5-12-16(34)18(36)23(47-12)32-8-30-14-19(26)28-7-29-21(14)32/h1-3,7-8,10-13,15-18,22-23,33-36H,4-6,25H2,(H2,27,37)(H,38,39)(H,40,41)(H,42,43)(H2,26,28,29)/t10-,11+,12+,13-,15+,16+,17+,18+,22+,23+/m0/s1
;
80F InChIKey         InChI                1.03  VVCRIRHVXHQAHX-VJDLECKTSA-N 
80F SMILES_CANONICAL CACTVS               3.385 "N[C@@H](CS[C@H]1C=CN(C=C1C(N)=O)[C@@H]2O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O)C(O)=O" 
80F SMILES           CACTVS               3.385 "N[CH](CS[CH]1C=CN(C=C1C(N)=O)[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O)C(O)=O" 
80F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)N5C=C[C@@H](C(=C5)C(=O)N)SC[C@@H](C(=O)O)N)O)O)O)O)N" 
80F SMILES           "OpenEye OEToolkits" 2.0.6 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)N5C=CC(C(=C5)C(=O)N)SCC(C(=O)O)N)O)O)O)O)N" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
80F "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
;(2~{R})-3-[[(4~{S})-3-aminocarbonyl-1-[(2~{R},3~{R},4~{S},5~{R})-5-[[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-3,4-bis(oxidanyl)oxolan-2-yl]-4~{H}-pyridin-4-yl]sulfanyl]-2-azanyl-propanoic acid
;
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
80F "Create component" 2017-03-07 PDBJ 
80F "Initial release"  2018-05-02 RCSB 
# 
