data_82F
# 
_chem_comp.id                                    82F 
_chem_comp.name                                  "N-[2-[(2S)-2-[(dipropylamino)methyl]piperidin-1-yl]ethyl]-6-oxidanylidene-5H-pyrido[2,3-b][1,4]benzodiazepine-11-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H38 N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-03-24 
_chem_comp.pdbx_modified_date                    2018-11-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        478.630 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     82F 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5XBA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
82F C4  C1  C 0 1 Y N N -60.763 -12.749 12.551 -2.540 -0.797 -3.582 C4  82F 1  
82F C5  C2  C 0 1 Y N N -58.812 -13.602 11.727 -2.853 -0.423 -1.322 C5  82F 2  
82F C6  C3  C 0 1 Y N N -56.730 -14.804 12.169 -4.042 0.796  0.381  C6  82F 3  
82F N1  N1  N 0 1 Y N N -60.001 -13.824 12.302 -2.494 -0.005 -2.528 N1  82F 4  
82F C7  C4  C 0 1 Y N N -56.490 -15.804 13.112 -4.511 2.101  0.385  C7  82F 5  
82F C8  C5  C 0 1 Y N N -55.271 -15.853 13.763 -5.720 2.400  0.983  C8  82F 6  
82F N2  N2  N 0 1 N N N -57.992 -14.741 11.505 -2.843 0.488  -0.261 N2  82F 7  
82F C9  C6  C 0 1 Y N N -54.291 -14.924 13.485 -6.473 1.399  1.573  C9  82F 8  
82F C10 C7  C 0 1 Y N N -54.515 -13.927 12.551 -6.018 0.099  1.584  C10 82F 9  
82F C11 C8  C 0 1 Y N N -55.735 -13.854 11.886 -4.786 -0.217 1.001  C11 82F 10 
82F C12 C9  C 0 1 N N N -58.411 -15.769 10.609 -1.689 1.060  0.136  C12 82F 11 
82F N3  N3  N 0 1 N N N -57.460 -16.653 10.295 -0.535 0.755  -0.490 N3  82F 12 
82F C13 C10 C 0 1 N N N -57.784 -17.743 9.387  0.719  1.377  -0.058 C13 82F 13 
82F C14 C11 C 0 1 N N N -57.349 -17.432 7.972  1.868  0.864  -0.928 C14 82F 14 
82F C15 C12 C 0 1 N N N -56.370 -18.701 6.152  3.097  2.939  -0.716 C15 82F 15 
82F N4  N4  N 0 1 N N N -57.614 -18.312 6.830  3.126  1.488  -0.495 N4  82F 16 
82F N   N5  N 0 1 N N N -57.087 -12.125 10.767 -3.598 -2.222 0.135  N   82F 17 
82F C   C13 C 0 1 N N N -55.897 -12.733 10.907 -4.269 -1.587 1.084  C   82F 18 
82F O   O1  O 0 1 N N N -54.934 -12.385 10.230 -4.476 -2.195 2.116  O   82F 19 
82F C1  C14 C 0 1 Y N N -58.348 -12.327 11.380 -3.272 -1.736 -1.128 C1  82F 20 
82F C16 C15 C 0 1 N N N -55.760 -17.540 5.404  4.358  3.572  -0.123 C16 82F 21 
82F C17 C16 C 0 1 N N N -56.738 -16.978 4.397  5.593  2.959  -0.789 C17 82F 22 
82F C18 C17 C 0 1 N N N -58.055 -16.604 5.065  5.573  1.442  -0.585 C18 82F 23 
82F C19 C18 C 0 1 N N S -58.606 -17.772 5.875  4.277  0.871  -1.165 C19 82F 24 
82F C2  C19 C 0 1 Y N N -59.162 -11.233 11.652 -3.356 -2.585 -2.227 C2  82F 25 
82F C20 C20 C 0 1 N N N -59.258 -18.890 5.056  4.244  -0.643 -0.946 C20 82F 26 
82F C21 C21 C 0 1 N N N -61.359 -18.603 6.274  3.176  -0.617 1.227  C21 82F 27 
82F C22 C22 C 0 1 N N N -61.747 -18.535 7.737  3.410  -0.843 2.722  C22 82F 28 
82F C23 C23 C 0 1 N N N -62.932 -17.627 7.962  2.181  -0.380 3.506  C23 82F 29 
82F C24 C24 C 0 1 N N N -60.646 -20.825 5.596  4.801  -2.332 0.697  C24 82F 30 
82F C25 C25 C 0 1 N N N -60.641 -21.829 6.725  6.284  -2.498 0.358  C25 82F 31 
82F C26 C26 C 0 1 N N N -61.116 -23.170 6.272  6.670  -3.975 0.469  C26 82F 32 
82F C3  C27 C 0 1 Y N N -60.391 -11.456 12.249 -2.982 -2.099 -3.472 C3  82F 33 
82F N5  N6  N 0 1 N N N -60.216 -19.481 5.998  4.404  -0.934 0.485  N5  82F 34 
82F O1  O2  O 0 1 N N N -59.557 -15.788 10.185 -1.689 1.850  1.060  O1  82F 35 
82F H1  H1  H 0 1 N N N -61.725 -12.905 13.016 -2.231 -0.419 -4.545 H1  82F 36 
82F H2  H2  H 0 1 N N N -57.253 -16.536 13.332 -3.930 2.885  -0.079 H2  82F 37 
82F H3  H3  H 0 1 N N N -55.085 -16.625 14.495 -6.078 3.419  0.990  H3  82F 38 
82F H4  H4  H 0 1 N N N -53.343 -14.974 13.999 -7.424 1.639  2.027  H4  82F 39 
82F H5  H5  H 0 1 N N N -53.741 -13.204 12.338 -6.612 -0.677 2.043  H5  82F 40 
82F H6  H6  H 0 1 N N N -56.540 -16.567 10.678 -0.535 0.125  -1.227 H6  82F 41 
82F H7  H7  H 0 1 N N N -58.872 -17.907 9.399  0.641  2.460  -0.160 H7  82F 42 
82F H8  H8  H 0 1 N N N -57.272 -18.655 9.726  0.910  1.123  0.984  H8  82F 43 
82F H9  H9  H 0 1 N N N -56.256 -17.314 8.013  1.946  -0.218 -0.826 H9  82F 44 
82F H10 H10 H 0 1 N N N -57.813 -16.467 7.721  1.677  1.118  -1.970 H10 82F 45 
82F H11 H11 H 0 1 N N N -56.589 -19.510 5.439  3.058  3.142  -1.786 H11 82F 46 
82F H12 H12 H 0 1 N N N -55.651 -19.060 6.903  2.217  3.363  -0.233 H12 82F 47 
82F H14 H14 H 0 1 N N N -57.081 -11.383 10.097 -3.303 -3.122 0.342  H14 82F 48 
82F H15 H15 H 0 1 N N N -54.858 -17.884 4.877  4.344  4.647  -0.301 H15 82F 49 
82F H16 H16 H 0 1 N N N -55.488 -16.752 6.121  4.390  3.381  0.950  H16 82F 50 
82F H17 H17 H 0 1 N N N -56.930 -17.734 3.621  5.580  3.184  -1.856 H17 82F 51 
82F H18 H18 H 0 1 N N N -56.302 -16.080 3.934  6.494  3.376  -0.339 H18 82F 52 
82F H19 H19 H 0 1 N N N -57.888 -15.748 5.735  6.428  0.996  -1.094 H19 82F 53 
82F H20 H20 H 0 1 N N N -58.785 -16.327 4.291  5.625  1.217  0.480  H20 82F 54 
82F H21 H21 H 0 1 N N N -59.416 -17.348 6.487  4.233  1.084  -2.233 H21 82F 55 
82F H22 H22 H 0 1 N N N -58.843 -10.232 11.403 -3.705 -3.601 -2.114 H22 82F 56 
82F H23 H23 H 0 1 N N N -59.773 -18.483 4.173  3.290  -1.040 -1.293 H23 82F 57 
82F H24 H24 H 0 1 N N N -58.511 -19.631 4.736  5.057  -1.109 -1.504 H24 82F 58 
82F H25 H25 H 0 1 N N N -61.104 -17.588 5.937  2.368  -1.264 0.884  H25 82F 59 
82F H26 H26 H 0 1 N N N -62.224 -18.972 5.704  2.906  0.424  1.054  H26 82F 60 
82F H27 H27 H 0 1 N N N -62.003 -19.547 8.085  3.581  -1.903 2.907  H27 82F 61 
82F H28 H28 H 0 1 N N N -60.892 -18.154 8.315  4.282  -0.273 3.043  H28 82F 62 
82F H29 H29 H 0 1 N N N -63.180 -17.606 9.033  2.010  0.680  3.321  H29 82F 63 
82F H30 H30 H 0 1 N N N -62.684 -16.610 7.623  1.309  -0.951 3.185  H30 82F 64 
82F H31 H31 H 0 1 N N N -63.795 -18.003 7.393  2.348  -0.541 4.571  H31 82F 65 
82F H32 H32 H 0 1 N N N -61.669 -20.757 5.197  4.206  -2.980 0.054  H32 82F 66 
82F H33 H33 H 0 1 N N N -59.968 -21.185 4.808  4.634  -2.603 1.740  H33 82F 67 
82F H34 H34 H 0 1 N N N -59.616 -21.926 7.112  6.464  -2.151 -0.659 H34 82F 68 
82F H35 H35 H 0 1 N N N -61.303 -21.468 7.526  6.883  -1.912 1.054  H35 82F 69 
82F H36 H36 H 0 1 N N N -61.098 -23.871 7.119  6.489  -4.322 1.486  H36 82F 70 
82F H37 H37 H 0 1 N N N -62.143 -23.085 5.888  6.070  -4.561 -0.228 H37 82F 71 
82F H38 H38 H 0 1 N N N -60.457 -23.542 5.474  7.726  -4.093 0.227  H38 82F 72 
82F H39 H39 H 0 1 N N N -61.049 -10.630 12.475 -3.037 -2.733 -4.344 H39 82F 73 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
82F C17 C18 SING N N 1  
82F C17 C16 SING N N 2  
82F C20 C19 SING N N 3  
82F C20 N5  SING N N 4  
82F C18 C19 SING N N 5  
82F C16 C15 SING N N 6  
82F C24 N5  SING N N 7  
82F C24 C25 SING N N 8  
82F C19 N4  SING N N 9  
82F N5  C21 SING N N 10 
82F C15 N4  SING N N 11 
82F C26 C25 SING N N 12 
82F C21 C22 SING N N 13 
82F N4  C14 SING N N 14 
82F C22 C23 SING N N 15 
82F C14 C13 SING N N 16 
82F C13 N3  SING N N 17 
82F O1  C12 DOUB N N 18 
82F O   C   DOUB N N 19 
82F N3  C12 SING N N 20 
82F C12 N2  SING N N 21 
82F N   C   SING N N 22 
82F N   C1  SING N N 23 
82F C   C11 SING N N 24 
82F C1  C2  DOUB Y N 25 
82F C1  C5  SING Y N 26 
82F N2  C5  SING N N 27 
82F N2  C6  SING N N 28 
82F C2  C3  SING Y N 29 
82F C5  N1  DOUB Y N 30 
82F C11 C6  DOUB Y N 31 
82F C11 C10 SING Y N 32 
82F C6  C7  SING Y N 33 
82F C3  C4  DOUB Y N 34 
82F N1  C4  SING Y N 35 
82F C10 C9  DOUB Y N 36 
82F C7  C8  DOUB Y N 37 
82F C9  C8  SING Y N 38 
82F C4  H1  SING N N 39 
82F C7  H2  SING N N 40 
82F C8  H3  SING N N 41 
82F C9  H4  SING N N 42 
82F C10 H5  SING N N 43 
82F N3  H6  SING N N 44 
82F C13 H7  SING N N 45 
82F C13 H8  SING N N 46 
82F C14 H9  SING N N 47 
82F C14 H10 SING N N 48 
82F C15 H11 SING N N 49 
82F C15 H12 SING N N 50 
82F N   H14 SING N N 51 
82F C16 H15 SING N N 52 
82F C16 H16 SING N N 53 
82F C17 H17 SING N N 54 
82F C17 H18 SING N N 55 
82F C18 H19 SING N N 56 
82F C18 H20 SING N N 57 
82F C19 H21 SING N N 58 
82F C2  H22 SING N N 59 
82F C20 H23 SING N N 60 
82F C20 H24 SING N N 61 
82F C21 H25 SING N N 62 
82F C21 H26 SING N N 63 
82F C22 H27 SING N N 64 
82F C22 H28 SING N N 65 
82F C23 H29 SING N N 66 
82F C23 H30 SING N N 67 
82F C23 H31 SING N N 68 
82F C24 H32 SING N N 69 
82F C24 H33 SING N N 70 
82F C25 H34 SING N N 71 
82F C25 H35 SING N N 72 
82F C26 H36 SING N N 73 
82F C26 H37 SING N N 74 
82F C26 H38 SING N N 75 
82F C3  H39 SING N N 76 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
82F InChI            InChI                1.03  "InChI=1S/C27H38N6O2/c1-3-16-31(17-4-2)20-21-10-7-8-18-32(21)19-15-29-27(35)33-24-13-6-5-11-22(24)26(34)30-23-12-9-14-28-25(23)33/h5-6,9,11-14,21H,3-4,7-8,10,15-20H2,1-2H3,(H,29,35)(H,30,34)/t21-/m0/s1" 
82F InChIKey         InChI                1.03  MZDYABXXPZNUCT-NRFANRHFSA-N                                                                                                                                                                                
82F SMILES_CANONICAL CACTVS               3.385 "CCCN(CCC)C[C@@H]1CCCCN1CCNC(=O)N2c3ccccc3C(=O)Nc4cccnc24"                                                                                                                                                 
82F SMILES           CACTVS               3.385 "CCCN(CCC)C[CH]1CCCCN1CCNC(=O)N2c3ccccc3C(=O)Nc4cccnc24"                                                                                                                                                   
82F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCN(CCC)C[C@@H]1CCCCN1CCNC(=O)N2c3ccccc3C(=O)Nc4c2nccc4"                                                                                                                                                 
82F SMILES           "OpenEye OEToolkits" 2.0.6 "CCCN(CCC)CC1CCCCN1CCNC(=O)N2c3ccccc3C(=O)Nc4c2nccc4"                                                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
82F "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[2-[(2~{S})-2-[(dipropylamino)methyl]piperidin-1-yl]ethyl]-6-oxidanylidene-5~{H}-pyrido[2,3-b][1,4]benzodiazepine-11-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
82F "Create component" 2017-03-24 RCSB 
82F "Initial release"  2018-11-21 RCSB 
# 
