data_CBF
#

_chem_comp.id                                   CBF
_chem_comp.name                                 "(2R,3R,4S,5S,6R)-2,3,4,5-tetrahydroxy-6-(hydroxymethyl)oxane-2-carboxamide"
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H13 N O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "C-(1-HYDROGYL-BETA-D-GLUCOPYRANOSYL) FORMAMIDE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-05-01
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       223.181
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    CBF
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1P4J
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     CBF
_pdbx_chem_comp_synonyms.name        "C-(1-HYDROGYL-BETA-D-GLUCOPYRANOSYL) FORMAMIDE"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CBF  O6    O6    O  0  1  N  N  N  33.344  18.784  27.254   2.364   2.855   0.148  O6    CBF   1  
CBF  C6    C6    C  0  1  N  N  N  32.245  19.490  27.796   2.506   1.548  -0.410  C6    CBF   2  
CBF  C5    C5    C  0  1  N  N  R  32.331  20.974  27.435   1.424   0.629   0.161  C5    CBF   3  
CBF  O5    O5    O  0  1  N  N  N  33.427  21.578  28.144   0.139   1.084  -0.266  O5    CBF   4  
CBF  C1    C1    C  0  1  N  N  R  33.553  22.994  27.930  -0.951   0.308   0.235  C1    CBF   5  
CBF  O1    O1    O  0  1  N  N  N  32.350  23.655  28.269  -0.929   0.321   1.664  O1    CBF   6  
CBF  C7    C7    C  0  1  N  N  N  34.664  23.536  28.823  -2.252   0.893  -0.253  C7    CBF   7  
CBF  O7    O7    O  0  1  N  N  N  34.348  24.146  29.849  -3.039   1.366   0.539  O7    CBF   8  
CBF  N1    N1    N  0  1  N  N  N  35.920  23.185  28.569  -2.540   0.890  -1.570  N1    CBF   9  
CBF  C2    C2    C  0  1  N  N  R  33.868  23.241  26.449  -0.821  -1.134  -0.264  C2    CBF  10  
CBF  O2    O2    O  0  1  N  N  N  33.992  24.626  26.198  -1.877  -1.926   0.282  O2    CBF  11  
CBF  C3    C3    C  0  1  N  N  S  32.750  22.638  25.585   0.529  -1.701   0.185  C3    CBF  12  
CBF  O3    O3    O  0  1  N  N  N  33.069  22.762  24.215   0.691  -3.021  -0.338  O3    CBF  13  
CBF  C4    C4    C  0  1  N  N  S  32.537  21.159  25.926   1.650  -0.799  -0.342  C4    CBF  14  
CBF  O4    O4    O  0  1  N  N  N  31.418  20.667  25.220   2.910  -1.278   0.132  O4    CBF  15  
CBF  HO6   HO6   H  0  1  N  N  N  33.277  17.865  27.486   3.019   3.492  -0.170  HO6   CBF  16  
CBF  H61   H61   H  0  1  N  N  N  31.312  19.073  27.388   2.402   1.602  -1.494  H61   CBF  17  
CBF  H62   H62   H  0  1  N  N  N  32.253  19.384  28.891   3.490   1.150  -0.159  H62   CBF  18  
CBF  H5    H5    H  0  1  N  N  N  31.385  21.458  27.722   1.472   0.644   1.249  H5    CBF  19  
CBF  HO1   HO1   H  0  1  N  N  N  32.487  24.184  29.046  -1.007   1.204   2.050  HO1   CBF  20  
CBF  HN11  HN11  H  0  0  N  N  N  36.644  23.414  29.219  -1.910   0.512  -2.203  HN11  CBF  21  
CBF  HN12  HN12  H  0  0  N  N  N  36.141  22.691  27.728  -3.377   1.267  -1.884  HN12  CBF  22  
CBF  H2    H2    H  0  1  N  N  N  34.823  22.759  26.194  -0.879  -1.149  -1.352  H2    CBF  23  
CBF  HO2   HO2   H  0  1  N  N  N  34.187  24.765  25.279  -2.763  -1.620   0.042  HO2   CBF  24  
CBF  H3    H3    H  0  1  N  N  N  31.822  23.190  25.796   0.567  -1.733   1.274  H3    CBF  25  
CBF  HO3   HO3   H  0  1  N  N  N  32.371  22.386  23.692   0.010  -3.644  -0.051  HO3   CBF  26  
CBF  H4    H4    H  0  1  N  N  N  33.433  20.595  25.629   1.643  -0.808  -1.431  H4    CBF  27  
CBF  HO4   HO4   H  0  1  N  N  N  31.554  20.786  24.287   3.667  -0.751  -0.160  HO4   CBF  28  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CBF  O6  C6    SING  N  N   1  
CBF  O6  HO6   SING  N  N   2  
CBF  C6  C5    SING  N  N   3  
CBF  C6  H61   SING  N  N   4  
CBF  C6  H62   SING  N  N   5  
CBF  C5  O5    SING  N  N   6  
CBF  C5  C4    SING  N  N   7  
CBF  C5  H5    SING  N  N   8  
CBF  O5  C1    SING  N  N   9  
CBF  C1  O1    SING  N  N  10  
CBF  C1  C7    SING  N  N  11  
CBF  C1  C2    SING  N  N  12  
CBF  O1  HO1   SING  N  N  13  
CBF  C7  O7    DOUB  N  N  14  
CBF  C7  N1    SING  N  N  15  
CBF  N1  HN11  SING  N  N  16  
CBF  N1  HN12  SING  N  N  17  
CBF  C2  O2    SING  N  N  18  
CBF  C2  C3    SING  N  N  19  
CBF  C2  H2    SING  N  N  20  
CBF  O2  HO2   SING  N  N  21  
CBF  C3  O3    SING  N  N  22  
CBF  C3  C4    SING  N  N  23  
CBF  C3  H3    SING  N  N  24  
CBF  O3  HO3   SING  N  N  25  
CBF  C4  O4    SING  N  N  26  
CBF  C4  H4    SING  N  N  27  
CBF  O4  HO4   SING  N  N  28  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CBF  SMILES            ACDLabs               11.02  "O=C(N)C1(O)OC(C(O)C(O)C1O)CO"  
CBF  SMILES_CANONICAL  CACTVS                3.352  "NC(=O)[C@]1(O)O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O"  
CBF  SMILES            CACTVS                3.352  "NC(=O)[C]1(O)O[CH](CO)[CH](O)[CH](O)[CH]1O"  
CBF  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "C([C@@H]1[C@H]([C@@H]([C@H]([C@@](O1)(C(=O)N)O)O)O)O)O"  
CBF  SMILES            "OpenEye OEToolkits"  1.7.0  "C(C1C(C(C(C(O1)(C(=O)N)O)O)O)O)O"  
CBF  InChI             InChI                 1.03   "InChI=1S/C7H13NO7/c8-6(13)7(14)5(12)4(11)3(10)2(1-9)15-7/h2-5,9-12,14H,1H2,(H2,8,13)/t2-,3-,4+,5-,7-/m1/s1"  
CBF  InChIKey          InChI                 1.03   DTZYCNDAJQDPQC-UHKLXPPTSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CBF  "SYSTEMATIC NAME"  ACDLabs               11.02  "(2R,3R,4S,5S,6R)-2,3,4,5-tetrahydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-carboxamide (non-preferred name)"  
CBF  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.6.1  "(2R,3R,4S,5S,6R)-2,3,4,5-tetrahydroxy-6-(hydroxymethyl)oxane-2-carboxamide"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
CBF  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
CBF  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
CBF  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
CBF  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  ketose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CBF  "Create component"      2003-05-01  RCSB  
CBF  "Modify descriptor"     2011-06-04  RCSB  
CBF  "Other modification"    2020-07-03  RCSB  
CBF  "Modify name"           2020-07-17  RCSB  
CBF  "Modify synonyms"       2020-07-17  RCSB  
CBF  "Modify internal type"  2020-07-17  RCSB  
CBF  "Modify linking type"   2020-07-17  RCSB  
##
