data_CGF
#

_chem_comp.id                                   CGF
_chem_comp.name                                 "C-(1-AZIDO-ALPHA-D-GLUCOPYRANOSYL) FORMAMIDE"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H14 N4 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-04-25
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       250.209
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    CGF
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1P4G
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CGF  O5    O5    O   0  1  N  N  N  33.623  21.306  27.844   0.108  -0.874  -0.771  O5    CGF   1  
CGF  C1    C1    C   0  1  N  N  S  33.919  22.737  27.506   0.686   0.351  -0.325  C1    CGF   2  
CGF  C7    C7    C   0  1  N  N  R  32.868  23.712  28.190   0.898   0.293   1.189  C7    CGF   3  
CGF  N7    N7    N   0  1  N  N  N  32.630  23.574  29.466   1.620   1.494   1.629  N7    CGF   4  
CGF  O7    O7    O   0  1  N  N  N  32.298  24.555  27.574   1.660  -0.870   1.519  O7    CGF   5  
CGF  N1    N1    N   0  1  N  N  N  35.198  23.137  28.086   1.976   0.551  -0.990  N1    CGF   6  
CGF  N2    N2    N   1  1  N  N  N  35.425  23.041  29.257   2.799  -0.203  -0.859  N2    CGF   7  
CGF  N3    N3    N  -1  1  N  N  N  35.623  22.908  30.417   3.621  -0.958  -0.728  N3    CGF   8  
CGF  C2    C2    C   0  1  N  N  R  34.095  22.962  25.957  -0.246   1.517  -0.664  C2    CGF   9  
CGF  O2    O2    O   0  1  N  N  N  34.374  24.322  25.641   0.349   2.745  -0.241  O2    CGF  10  
CGF  C3    C3    C   0  1  N  N  S  32.777  22.469  25.225  -1.581   1.316   0.062  C3    CGF  11  
CGF  O3    O3    O   0  1  N  N  N  32.915  22.652  23.788  -2.514   2.313  -0.360  O3    CGF  12  
CGF  C4    C4    C   0  1  N  N  S  32.525  20.957  25.624  -2.124  -0.075  -0.285  C4    CGF  13  
CGF  O4    O4    O   0  1  N  N  N  31.336  20.543  24.948  -3.291  -0.343   0.495  O4    CGF  14  
CGF  C5    C5    C   0  1  N  N  R  32.378  20.839  27.243  -1.050  -1.120   0.025  C5    CGF  15  
CGF  C6    C6    C   0  1  N  N  N  32.151  19.373  27.690  -1.595  -2.515  -0.287  C6    CGF  16  
CGF  O6    O6    O   0  1  N  N  N  33.206  18.586  27.133  -0.642  -3.500   0.117  O6    CGF  17  
CGF  H7    H7    H   0  1  N  N  N  32.862  24.102  27.145  -0.070   0.247   1.690  H7    CGF  18  
CGF  HN71  HN71  H   0  0  N  N  N  31.955  24.200  29.905   1.737   1.413   2.628  HN71  CGF  19  
CGF  HN72  HN72  H   0  0  N  N  N  33.512  23.627  29.975   2.543   1.442   1.224  HN72  CGF  20  
CGF  HO7   HO7   H   0  1  N  N  N  31.669  25.138  27.983   2.548  -0.733   1.159  HO7   CGF  21  
CGF  H2    H2    H   0  1  N  N  N  34.973  22.372  25.604  -0.417   1.546  -1.740  H2    CGF  22  
CGF  HO2   HO2   H   0  1  N  N  N  34.480  24.457  24.706  -0.274   3.450  -0.467  HO2   CGF  23  
CGF  H3    H3    H   0  1  N  N  N  31.891  23.067  25.541  -1.427   1.391   1.138  H3    CGF  24  
CGF  HO3   HO3   H   0  1  N  N  N  32.125  22.356  23.349  -3.340   2.141   0.113  HO3   CGF  25  
CGF  H4    H4    H   0  1  N  N  N  33.373  20.298  25.325  -2.376  -0.114  -1.345  H4    CGF  26  
CGF  HO4   HO4   H   0  1  N  N  N  31.421  20.611  24.004  -3.593  -1.228   0.250  HO4   CGF  27  
CGF  H5    H5    H   0  1  N  N  N  31.501  21.448  27.565  -0.783  -1.063   1.081  H5    CGF  28  
CGF  H61   H61   H   0  1  N  N  N  31.137  18.990  27.426  -2.528  -2.670   0.254  H61   CGF  29  
CGF  H62   H62   H   0  1  N  N  N  32.064  19.264  28.796  -1.777  -2.603  -1.358  H62   CGF  30  
CGF  HO6   HO6   H   0  1  N  N  N  33.066  17.687  27.407  -1.023  -4.363  -0.097  HO6   CGF  31  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CGF  O5  C1    SING  N  N   1  
CGF  O5  C5    SING  N  N   2  
CGF  C1  C7    SING  N  N   3  
CGF  C1  N1    SING  N  N   4  
CGF  C1  C2    SING  N  N   5  
CGF  C7  N7    SING  N  N   6  
CGF  C7  O7    SING  N  N   7  
CGF  C7  H7    SING  N  N   8  
CGF  N7  HN71  SING  N  N   9  
CGF  N7  HN72  SING  N  N  10  
CGF  O7  HO7   SING  N  N  11  
CGF  N1  N2    DOUB  N  N  12  
CGF  N2  N3    DOUB  N  N  13  
CGF  C2  O2    SING  N  N  14  
CGF  C2  C3    SING  N  N  15  
CGF  C2  H2    SING  N  N  16  
CGF  O2  HO2   SING  N  N  17  
CGF  C3  O3    SING  N  N  18  
CGF  C3  C4    SING  N  N  19  
CGF  C3  H3    SING  N  N  20  
CGF  O3  HO3   SING  N  N  21  
CGF  C4  O4    SING  N  N  22  
CGF  C4  C5    SING  N  N  23  
CGF  C4  H4    SING  N  N  24  
CGF  O4  HO4   SING  N  N  25  
CGF  C5  C6    SING  N  N  26  
CGF  C5  H5    SING  N  N  27  
CGF  C6  O6    SING  N  N  28  
CGF  C6  H61   SING  N  N  29  
CGF  C6  H62   SING  N  N  30  
CGF  O6  HO6   SING  N  N  31  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CGF  SMILES            ACDLabs               10.04  "[N-]=[N+]=N/C1(OC(C(O)C(O)C1O)CO)C(O)N"  
CGF  SMILES_CANONICAL  CACTVS                3.341  "N[C@H](O)[C@]1(O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)N=[N+]=[N-]"  
CGF  SMILES            CACTVS                3.341  "N[CH](O)[C]1(O[CH](CO)[CH](O)[CH](O)[CH]1O)N=[N+]=[N-]"  
CGF  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C([C@@H]1[C@H]([C@@H]([C@H]([C@](O1)(C(N)O)N=[N+]=[N-])O)O)O)O"  
CGF  SMILES            "OpenEye OEToolkits"  1.5.0  "C(C1C(C(C(C(O1)(C(N)O)N=[N+]=[N-])O)O)O)O"  
CGF  InChI             InChI                 1.03   "InChI=1S/C7H14N4O6/c8-6(16)7(10-11-9)5(15)4(14)3(13)2(1-12)17-7/h2-6,12-16H,1,8H2/t2-,3-,4+,5-,6?,7+/m1/s1"  
CGF  InChIKey          InChI                 1.03   LAKOUYZWWLMCSL-JBFGQTLDSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CGF  "SYSTEMATIC NAME"  ACDLabs               10.04  
;(2S,3R,4S,5S,6R)-2-[(R)-amino(hydroxy)methyl]-2-azido-6-(hydroxymethyl)tetrahydro-2H-pyran-3,4,5-triol (non-preferred
name)
;
  
CGF  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S,3R,4S,5S,6R)-2-(amino-hydroxy-methyl)-2-azido-6-(hydroxymethyl)oxane-3,4,5-triol"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
CGF  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
CGF  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
CGF  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CGF  "Create component"     2003-04-25  RCSB  
CGF  "Modify descriptor"    2011-06-04  RCSB  
CGF  "Other modification"   2020-07-03  RCSB  
CGF  "Modify linking type"  2020-07-17  RCSB  
##
