data_JRF
# 
_chem_comp.id                                    JRF 
_chem_comp.name                                  "1-Hydroxy-3-(trifluoromethyl)pyrido[1,2-a]benzimidazole-4-carbonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H6 F3 N3 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "1-Hydroxy-3-trifluoromethyl-benzo[4,5]imidazo[1,2-a]pyridine-4-carbonitrile" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-05-09 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        277.201 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JRF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ZK3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JRF C08  C1  C 0 1 Y N N 185.632 172.385 182.620 0.480  0.714  -0.001 C08  JRF 1  
JRF C09  C2  C 0 1 Y N N 184.150 172.698 182.628 -0.985 0.808  -0.000 C09  JRF 2  
JRF C10  C3  C 0 1 Y N N 187.772 172.193 181.665 2.437  -0.332 0.006  C10  JRF 3  
JRF C11  C4  C 0 1 Y N N 183.586 173.143 181.440 -1.730 -0.369 -0.000 C11  JRF 4  
JRF C12  C5  C 0 1 Y N N 185.694 173.016 180.269 0.300  -1.656 -0.001 C12  JRF 5  
JRF C13  C6  C 0 1 Y N N 187.785 171.819 183.020 2.638  1.059  -0.000 C13  JRF 6  
JRF C14  C7  C 0 1 N N N 182.086 173.484 181.354 -3.236 -0.315 -0.000 C14  JRF 7  
JRF C15  C8  C 0 1 Y N N 184.354 173.308 180.241 -1.072 -1.593 -0.000 C15  JRF 8  
JRF C16  C9  C 0 1 Y N N 188.997 172.126 180.961 3.530  -1.187 0.007  C16  JRF 9  
JRF C17  C10 C 0 1 N N N 183.396 172.519 183.865 -1.635 2.085  0.001  C17  JRF 10 
JRF C18  C11 C 0 1 Y N N 189.015 171.399 183.602 3.943  1.565  -0.006 C18  JRF 11 
JRF C19  C12 C 0 1 Y N N 190.171 171.712 181.559 4.806  -0.666 0.002  C19  JRF 12 
JRF C20  C13 C 0 1 Y N N 190.201 171.337 182.909 5.006  0.707  -0.005 C20  JRF 13 
JRF F01  F1  F 0 1 N N N 181.220 172.527 181.732 -3.706 -0.414 -1.314 F01  JRF 14 
JRF F02  F2  F 0 1 N N N 181.746 174.499 182.235 -3.741 -1.378 0.757  F02  JRF 15 
JRF F03  F3  F 0 1 N N N 181.498 173.896 180.218 -3.659 0.896  0.557  F03  JRF 16 
JRF N05  N1  N 0 1 Y N N 186.403 172.562 181.380 1.066  -0.528 0.005  N05  JRF 17 
JRF N06  N2  N 0 1 Y N N 186.467 171.944 183.586 1.417  1.644  -0.000 N06  JRF 18 
JRF N07  N3  N 0 1 N N N 182.795 172.377 184.848 -2.150 3.097  0.001  N07  JRF 19 
JRF O04  O1  O 0 1 N N N 186.486 173.146 179.184 0.904  -2.865 -0.006 O04  JRF 20 
JRF H151 H1  H 0 0 N N N 183.886 173.656 179.332 -1.647 -2.507 -0.005 H151 JRF 21 
JRF H161 H2  H 0 0 N N N 189.015 172.409 179.919 3.381  -2.257 0.013  H161 JRF 22 
JRF H181 H3  H 0 0 N N N 189.016 171.114 184.644 4.110  2.632  -0.011 H181 JRF 23 
JRF H191 H4  H 0 0 N N N 191.080 171.677 180.977 5.657  -1.331 0.004  H191 JRF 24 
JRF H201 H5  H 0 0 N N N 191.115 171.014 183.384 6.011  1.102  -0.009 H201 JRF 25 
JRF H041 H6  H 0 0 N N N 187.375 172.896 179.408 0.290  -3.612 -0.010 H041 JRF 26 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JRF O04 C12  SING N N 1  
JRF F03 C14  SING N N 2  
JRF C15 C12  DOUB Y N 3  
JRF C15 C11  SING Y N 4  
JRF C12 N05  SING Y N 5  
JRF C16 C19  DOUB Y N 6  
JRF C16 C10  SING Y N 7  
JRF C14 C11  SING N N 8  
JRF C14 F01  SING N N 9  
JRF C14 F02  SING N N 10 
JRF N05 C10  SING Y N 11 
JRF N05 C08  SING Y N 12 
JRF C11 C09  DOUB Y N 13 
JRF C19 C20  SING Y N 14 
JRF C10 C13  DOUB Y N 15 
JRF C08 C09  SING Y N 16 
JRF C08 N06  DOUB Y N 17 
JRF C09 C17  SING N N 18 
JRF C20 C18  DOUB Y N 19 
JRF C13 N06  SING Y N 20 
JRF C13 C18  SING Y N 21 
JRF C17 N07  TRIP N N 22 
JRF C15 H151 SING N N 23 
JRF C16 H161 SING N N 24 
JRF C18 H181 SING N N 25 
JRF C19 H191 SING N N 26 
JRF C20 H201 SING N N 27 
JRF O04 H041 SING N N 28 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JRF InChI            InChI                1.06  "InChI=1S/C13H6F3N3O/c14-13(15,16)8-5-11(20)19-10-4-2-1-3-9(10)18-12(19)7(8)6-17/h1-5,20H" 
JRF InChIKey         InChI                1.06  NSMPADIWUYJQKF-UHFFFAOYSA-N                                                                
JRF SMILES_CANONICAL CACTVS               3.385 "Oc1cc(c(C#N)c2nc3ccccc3n12)C(F)(F)F"                                                      
JRF SMILES           CACTVS               3.385 "Oc1cc(c(C#N)c2nc3ccccc3n12)C(F)(F)F"                                                      
JRF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)nc3n2c(cc(c3C#N)C(F)(F)F)O"                                                    
JRF SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)nc3n2c(cc(c3C#N)C(F)(F)F)O"                                                    
# 
_pdbx_chem_comp_identifier.comp_id           JRF 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "1-oxidanyl-3-(trifluoromethyl)pyrido[1,2-a]benzimidazole-4-carbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JRF "Create component"  2022-05-09 PDBE 
JRF "Modify name"       2022-05-17 PDBE 
JRF "Initial release"   2022-05-25 RCSB 
JRF "Modify descriptor" 2022-08-22 RCSB 
# 
