data_LNF
# 
_chem_comp.id                                    LNF 
_chem_comp.name                                  "diethyl-[3-[[4-(4,5,9-trimethyl-10H-indolo[3,2-b]quinolin-5-ium-11-yl)phenyl]carbonylamino]propyl]azanium" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H38 N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "4,N5,9-Trimethyl-11-(4-((3-diethylaminopropyl)carbamoyl)phenyl-10H-indolo[3,2-b]quinolinium" 
_chem_comp.pdbx_formal_charge                    2 
_chem_comp.pdbx_initial_date                     2022-07-07 
_chem_comp.pdbx_modified_date                    2022-11-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        494.670 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     LNF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8ABN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
LNF C4   C1  C 0 1 Y N N 28.581 36.716 31.905 -5.112 2.897  -1.112 C4   LNF 1  
LNF C6   C2  C 0 1 Y N N 26.035 31.845 30.167 -6.095 -2.606 -0.276 C6   LNF 2  
LNF C7   C3  C 0 1 Y N N 25.467 30.597 29.842 -6.135 -3.984 -0.241 C7   LNF 3  
LNF C8   C4  C 0 1 Y N N 25.236 29.622 30.831 -4.971 -4.712 -0.057 C8   LNF 4  
LNF C13  C5  C 0 1 Y N N 29.360 33.094 37.640 0.735  1.414  2.075  C13  LNF 5  
LNF C15  C6  C 0 1 Y N N 26.839 32.894 36.449 -0.058 0.278  -0.339 C15  LNF 6  
LNF C17  C7  C 0 1 N N N 27.586 31.063 41.789 5.465  0.543  1.007  C17  LNF 7  
LNF C20  C8  C 0 1 N N N 29.241 33.216 45.217 8.430  0.212  -2.071 C20  LNF 8  
LNF C21  C9  C 0 1 N N N 30.443 32.281 45.398 9.147  -0.477 -3.234 C21  LNF 9  
LNF C22  C10 C 0 1 N N N 26.867 33.536 45.489 9.972  -0.677 -0.462 C22  LNF 10 
LNF C4C  C11 C 0 1 Y N N 28.147 35.089 33.745 -3.211 1.906  -0.008 C4C  LNF 11 
LNF C11  C12 C 0 1 Y N N 27.697 33.822 34.315 -2.446 0.737  0.202  C11  LNF 12 
LNF C11A C13 C 0 0 Y N N 27.900 33.449 35.706 -1.009 0.796  0.544  C11A LNF 13 
LNF C12  C14 C 0 1 Y N N 29.167 33.530 36.317 -0.602 1.359  1.756  C12  LNF 14 
LNF C13A C15 C 0 0 Y N N 28.295 32.550 38.398 1.687  0.906  1.187  C13A LNF 15 
LNF C16A C16 C 0 0 N N N 28.539 32.102 39.737 3.123  0.970  1.527  C16A LNF 16 
LNF O16  O1  O 0 1 N N N 29.664 32.129 40.242 3.477  1.464  2.579  O16  LNF 17 
LNF N16  N1  N 0 1 N N N 27.499 31.648 40.450 4.040  0.480  0.669  N16  LNF 18 
LNF C18  C17 C 0 1 N N N 27.574 32.170 42.849 6.285  -0.076 -0.127 C18  LNF 19 
LNF C19  C18 C 0 1 N N N 27.673 31.550 44.261 7.772  -0.010 0.225  C19  LNF 20 
LNF N20  N2  N 1 1 N N N 27.939 32.520 45.368 8.559  -0.610 -0.861 N20  LNF 21 
LNF C23  C19 C 0 1 N N N 25.658 33.013 46.281 10.123 -1.631 0.724  C23  LNF 22 
LNF C14  C20 C 0 1 Y N N 27.027 32.455 37.772 1.280  0.338  -0.023 C14  LNF 23 
LNF C10A C21 C 0 0 Y N N 27.092 32.918 33.455 -3.096 -0.494 0.090  C10A LNF 24 
LNF C5B  C22 C 0 1 Y N N 26.930 33.284 32.154 -4.493 -0.512 -0.112 C5B  LNF 25 
LNF C5C  C23 C 0 1 Y N N 26.343 32.139 31.520 -4.883 -1.937 -0.123 C5C  LNF 26 
LNF C9B  C24 C 0 1 Y N N 26.147 31.114 32.505 -3.703 -2.677 0.059  C9B  LNF 27 
LNF N10  N3  N 0 1 Y N N 26.641 31.640 33.696 -2.644 -1.794 0.178  N10  LNF 28 
LNF C9   C25 C 0 1 Y N N 25.582 29.872 32.171 -3.762 -4.067 0.093  C9   LNF 29 
LNF C9A  C26 C 0 1 N N N 25.360 28.806 33.227 -2.504 -4.873 0.293  C9A  LNF 30 
LNF N5   N4  N 1 1 Y N N 27.260 34.512 31.566 -5.168 0.617  -0.272 N5   LNF 31 
LNF C5A  C27 C 0 1 N N N 26.811 34.823 30.184 -6.619 0.558  -0.068 C5A  LNF 32 
LNF C4B  C28 C 0 1 Y N N 28.001 35.476 32.329 -4.554 1.777  -0.485 C4B  LNF 33 
LNF C4A  C29 C 0 1 N N N 28.687 37.184 30.459 -6.247 2.809  -2.103 C4A  LNF 34 
LNF C3   C30 C 0 1 Y N N 29.146 37.601 32.836 -4.570 4.133  -0.892 C3   LNF 35 
LNF C2   C31 C 0 1 Y N N 29.186 37.288 34.191 -3.388 4.282  -0.176 C2   LNF 36 
LNF C1   C32 C 0 1 Y N N 28.697 36.057 34.628 -2.705 3.184  0.257  C1   LNF 37 
LNF H6   H1  H 0 1 N N N 26.234 32.571 29.393 -7.012 -2.057 -0.428 H6   LNF 38 
LNF H7   H2  H 0 1 N N N 25.204 30.385 28.816 -7.079 -4.496 -0.358 H7   LNF 39 
LNF H8   H3  H 0 1 N N N 24.790 28.677 30.559 -5.010 -5.791 -0.030 H8   LNF 40 
LNF H13  H4  H 0 1 N N N 30.340 33.176 38.087 1.050  1.853  3.011  H13  LNF 41 
LNF H15  H5  H 0 1 N N N 25.864 32.804 35.994 -0.373 -0.161 -1.274 H15  LNF 42 
LNF H172 H6  H 0 0 N N N 26.727 30.395 41.951 5.760  1.583  1.143  H172 LNF 43 
LNF H171 H7  H 0 0 N N N 28.519 30.487 41.875 5.645  -0.010 1.929  H171 LNF 44 
LNF H202 H8  H 0 0 N N N 29.288 33.657 44.211 8.879  1.189  -1.896 H202 LNF 45 
LNF H201 H9  H 0 0 N N N 29.301 34.015 45.971 7.375  0.335  -2.316 H201 LNF 46 
LNF H212 H10 H 0 0 N N N 31.375 32.853 45.275 9.051  0.133  -4.133 H212 LNF 47 
LNF H211 H11 H 0 0 N N N 30.415 31.838 46.405 10.202 -0.600 -2.990 H211 LNF 48 
LNF H213 H12 H 0 0 N N N 30.402 31.481 44.644 8.698  -1.455 -3.409 H213 LNF 49 
LNF H222 H13 H 0 0 N N N 27.273 34.419 46.004 10.569 -1.040 -1.299 H222 LNF 50 
LNF H221 H14 H 0 0 N N N 26.533 33.821 44.480 10.316 0.317  -0.175 H221 LNF 51 
LNF H12  H15 H 0 1 N N N 30.001 33.932 35.762 -1.338 1.752  2.443  H12  LNF 52 
LNF H16  H16 H 0 1 N N N 26.592 31.714 40.034 3.758  0.086  -0.171 H16  LNF 53 
LNF H182 H17 H 0 0 N N N 28.430 32.841 42.685 5.989  -1.116 -0.263 H182 LNF 54 
LNF H181 H18 H 0 0 N N N 26.638 32.743 42.767 6.105  0.476  -1.049 H181 LNF 55 
LNF H192 H19 H 0 0 N N N 26.722 31.041 44.476 8.069  1.030  0.357  H192 LNF 56 
LNF H191 H20 H 0 0 N N N 28.489 30.813 44.252 7.951  -0.559 1.150  H191 LNF 57 
LNF H232 H22 H 0 0 N N N 24.892 33.800 46.344 9.652  -2.585 0.485  H232 LNF 58 
LNF H231 H23 H 0 0 N N N 25.239 32.133 45.771 11.181 -1.790 0.930  H231 LNF 59 
LNF H233 H24 H 0 0 N N N 25.978 32.732 47.295 9.643  -1.199 1.602  H233 LNF 60 
LNF H14  H25 H 0 1 N N N 26.193 32.040 38.319 2.014  -0.062 -0.706 H14  LNF 61 
LNF H10  H26 H 0 1 N N N 26.664 31.169 34.578 -1.717 -2.054 0.304  H10  LNF 62 
LNF H9A2 H27 H 0 0 N N N 26.255 28.171 33.302 -2.059 -5.098 -0.677 H9A2 LNF 63 
LNF H9A1 H28 H 0 0 N N N 25.169 29.286 34.198 -1.797 -4.301 0.893  H9A1 LNF 64 
LNF H9A3 H29 H 0 0 N N N 24.495 28.187 32.947 -2.746 -5.804 0.806  H9A3 LNF 65 
LNF H5A2 H30 H 0 0 N N N 27.165 35.825 29.900 -6.852 0.818  0.964  H5A2 LNF 66 
LNF H5A3 H31 H 0 0 N N N 27.223 34.078 29.488 -7.109 1.263  -0.740 H5A3 LNF 67 
LNF H5A1 H32 H 0 0 N N N 25.712 34.796 30.141 -6.975 -0.451 -0.278 H5A1 LNF 68 
LNF H4A1 H33 H 0 0 N N N 27.796 37.773 30.197 -7.197 2.880  -1.574 H4A1 LNF 69 
LNF H4A3 H34 H 0 0 N N N 29.586 37.807 30.340 -6.167 3.627  -2.820 H4A3 LNF 70 
LNF H4A2 H35 H 0 0 N N N 28.756 36.310 29.795 -6.195 1.857  -2.631 H4A2 LNF 71 
LNF H3   H36 H 0 1 N N N 29.556 38.540 32.495 -5.074 5.003  -1.284 H3   LNF 72 
LNF H2   H37 H 0 1 N N N 29.593 37.994 34.900 -3.007 5.268  0.039  H2   LNF 73 
LNF H1   H38 H 0 1 N N N 28.738 35.830 35.683 -1.787 3.320  0.809  H1   LNF 74 
LNF H20N H39 H 0 0 N N N 27.967 32.003 46.223 8.219  -1.541 -1.048 H20N LNF 75 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
LNF C7   C6   DOUB Y N 1  
LNF C7   C8   SING Y N 2  
LNF C6   C5C  SING Y N 3  
LNF C5A  N5   SING N N 4  
LNF C4A  C4   SING N N 5  
LNF C8   C9   DOUB Y N 6  
LNF C5C  C5B  SING Y N 7  
LNF C5C  C9B  DOUB Y N 8  
LNF N5   C5B  DOUB Y N 9  
LNF N5   C4B  SING Y N 10 
LNF C4   C4B  DOUB Y N 11 
LNF C4   C3   SING Y N 12 
LNF C5B  C10A SING Y N 13 
LNF C9   C9B  SING Y N 14 
LNF C9   C9A  SING N N 15 
LNF C4B  C4C  SING Y N 16 
LNF C9B  N10  SING Y N 17 
LNF C3   C2   DOUB Y N 18 
LNF C10A N10  SING Y N 19 
LNF C10A C11  DOUB Y N 20 
LNF C4C  C11  SING Y N 21 
LNF C4C  C1   DOUB Y N 22 
LNF C2   C1   SING Y N 23 
LNF C11  C11A SING N N 24 
LNF C11A C12  DOUB Y N 25 
LNF C11A C15  SING Y N 26 
LNF C12  C13  SING Y N 27 
LNF C15  C14  DOUB Y N 28 
LNF C13  C13A DOUB Y N 29 
LNF C14  C13A SING Y N 30 
LNF C13A C16A SING N N 31 
LNF C16A O16  DOUB N N 32 
LNF C16A N16  SING N N 33 
LNF N16  C17  SING N N 34 
LNF C17  C18  SING N N 35 
LNF C18  C19  SING N N 36 
LNF C19  N20  SING N N 37 
LNF C20  N20  SING N N 38 
LNF C20  C21  SING N N 39 
LNF N20  C22  SING N N 40 
LNF C22  C23  SING N N 41 
LNF C6   H6   SING N N 42 
LNF C7   H7   SING N N 43 
LNF C8   H8   SING N N 44 
LNF C13  H13  SING N N 45 
LNF C15  H15  SING N N 46 
LNF C17  H172 SING N N 47 
LNF C17  H171 SING N N 48 
LNF C20  H202 SING N N 49 
LNF C20  H201 SING N N 50 
LNF C21  H212 SING N N 51 
LNF C21  H211 SING N N 52 
LNF C21  H213 SING N N 53 
LNF C22  H222 SING N N 54 
LNF C22  H221 SING N N 55 
LNF C12  H12  SING N N 56 
LNF N16  H16  SING N N 57 
LNF C18  H182 SING N N 58 
LNF C18  H181 SING N N 59 
LNF C19  H192 SING N N 60 
LNF C19  H191 SING N N 61 
LNF C23  H232 SING N N 62 
LNF C23  H231 SING N N 63 
LNF C23  H233 SING N N 64 
LNF C14  H14  SING N N 65 
LNF N10  H10  SING N N 66 
LNF C9A  H9A2 SING N N 67 
LNF C9A  H9A1 SING N N 68 
LNF C9A  H9A3 SING N N 69 
LNF C5A  H5A2 SING N N 70 
LNF C5A  H5A3 SING N N 71 
LNF C5A  H5A1 SING N N 72 
LNF C4A  H4A1 SING N N 73 
LNF C4A  H4A3 SING N N 74 
LNF C4A  H4A2 SING N N 75 
LNF C3   H3   SING N N 76 
LNF C2   H2   SING N N 77 
LNF C1   H1   SING N N 78 
LNF N20  H20N SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
LNF InChI            InChI                1.06  "InChI=1S/C32H36N4O/c1-6-36(7-2)20-10-19-33-32(37)24-17-15-23(16-18-24)27-25-13-9-12-22(4)30(25)35(5)31-26-14-8-11-21(3)28(26)34-29(27)31/h8-9,11-18H,6-7,10,19-20H2,1-5H3,(H,33,37)/p+2" 
LNF InChIKey         InChI                1.06  WLKGFBFIAFQINR-UHFFFAOYSA-P                                                                                                                                                               
LNF SMILES_CANONICAL CACTVS               3.385 "CC[NH+](CC)CCCNC(=O)c1ccc(cc1)c2c3[nH]c4c(C)cccc4c3[n+](C)c5c(C)cccc25"                                                                                                                  
LNF SMILES           CACTVS               3.385 "CC[NH+](CC)CCCNC(=O)c1ccc(cc1)c2c3[nH]c4c(C)cccc4c3[n+](C)c5c(C)cccc25"                                                                                                                  
LNF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[NH+](CC)CCCNC(=O)c1ccc(cc1)c2c3cccc(c3[n+](c4c2[nH]c5c4cccc5C)C)C"                                                                                                                    
LNF SMILES           "OpenEye OEToolkits" 2.0.7 "CC[NH+](CC)CCCNC(=O)c1ccc(cc1)c2c3cccc(c3[n+](c4c2[nH]c5c4cccc5C)C)C"                                                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           LNF 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "diethyl-[3-[[4-(4,5,9-trimethyl-10~{H}-indolo[3,2-b]quinolin-5-ium-11-yl)phenyl]carbonylamino]propyl]azanium" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      LNF 
_pdbx_chem_comp_synonyms.name         "4,N5,9-Trimethyl-11-(4-((3-diethylaminopropyl)carbamoyl)phenyl-10H-indolo[3,2-b]quinolinium" 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
LNF "Create component"  2022-07-07 PDBE 
LNF "Modify synonyms"   2022-08-13 PDBE 
LNF "Modify charge"     2022-08-15 PDBE 
LNF "Modify descriptor" 2022-08-22 RCSB 
LNF "Initial release"   2022-11-16 RCSB 
# 
