data_OCF
# 
_chem_comp.id                                    OCF 
_chem_comp.name                                  "3-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]oxypropanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H15 N2 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               PMP 
_chem_comp.pdbx_synonyms                         
;PYRIDOXAMINE-5'-PHOSPHATE linked to 3-aminooxypropionic acid
;
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-09-04 
_chem_comp.pdbx_modified_date                    2022-11-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        334.219 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     OCF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8AYJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OCF N1   N1   N 0 1 Y N N 13.314 -1.619 15.109 1.945  -3.221 -0.001 N1   OCF 1  
OCF C2   C2A  C 0 1 Y N N 12.199 -1.928 15.754 0.649  -3.459 0.003  C2   OCF 2  
OCF C2A  C2   C 0 1 N N N 12.307 -2.729 17.006 0.154  -4.883 0.013  C2A  OCF 3  
OCF C3   C3   C 0 1 Y N N 10.944 -1.566 15.230 -0.265 -2.416 -0.001 C3   OCF 4  
OCF O3   O2P  O 0 1 N N N 9.812  -1.901 15.915 -1.599 -2.667 0.004  O3   OCF 5  
OCF C4   C4   C 0 1 Y N N 10.892 -0.825 14.045 0.214  -1.096 -0.009 C4   OCF 6  
OCF C4A  C5   C 0 1 N N N 9.640  -0.408 13.451 -0.717 0.049  -0.013 C4A  OCF 7  
OCF N    N2   N 0 1 N N N 8.663  -0.028 14.154 -1.994 -0.156 -0.008 N    OCF 8  
OCF C5   C6   C 0 1 Y N N 12.078 -0.471 13.410 1.600  -0.897 -0.013 C5   OCF 9  
OCF C6   C7   C 0 1 Y N N 13.249 -0.920 13.948 2.434  -1.995 -0.009 C6   OCF 10 
OCF C5A  C8   C 0 1 N N N 12.046 0.326  12.138 2.172  0.497  -0.022 C5A  OCF 11 
OCF O4P  O2   O 0 1 N N N 11.435 -0.535 11.141 3.599  0.426  -0.025 O4P  OCF 12 
OCF P    P1   P 0 1 N N N 10.562 0.059  9.918  4.542  1.731  -0.034 P    OCF 13 
OCF O2P  O3   O 0 1 N N N 9.340  0.613  10.605 4.339  2.549  1.338  O2P  OCF 14 
OCF O3P  O4   O 0 1 N N N 11.434 1.128  9.219  6.082  1.280  -0.167 O3P  OCF 15 
OCF O1P  O5   O 0 1 N N N 10.291 -1.138 9.015  4.179  2.594  -1.181 O1P  OCF 16 
OCF OG   OG   O 0 1 N N N 7.605  0.383  13.318 -2.888 0.942  -0.012 OG   OCF 17 
OCF CB   CB   C 0 1 N N N 7.070  1.622  13.792 -4.267 0.570  -0.006 CB   OCF 18 
OCF CA   CA   C 0 1 N N N 7.012  1.594  15.321 -5.136 1.829  -0.011 CA   OCF 19 
OCF C    C    C 0 1 N N N 6.157  0.530  16.008 -6.591 1.436  -0.005 C    OCF 20 
OCF OXT  OXT  O 0 1 N N N 6.737  -0.244 16.828 -7.542 2.383  -0.007 OXT  OCF 21 
OCF O    O    O 0 1 N N N 4.912  0.472  15.764 -6.901 0.268  0.002  O    OCF 22 
OCF H2A1 H1   H 0 0 N N N 13.365 -2.951 17.210 0.037  -5.220 1.043  H2A1 OCF 23 
OCF H2A2 H2   H 0 0 N N N 11.885 -2.156 17.845 -0.807 -4.936 -0.499 H2A2 OCF 24 
OCF H2A3 H3   H 0 0 N N N 11.751 -3.671 16.888 0.874  -5.521 -0.499 H2A3 OCF 25 
OCF HO3  H4   H 0 1 N N N 10.046 -2.401 16.688 -1.983 -2.735 0.889  HO3  OCF 26 
OCF H6   H8   H 0 1 N N N 14.169 -0.709 13.424 3.504  -1.850 -0.012 H6   OCF 27 
OCF H5A1 H9   H 0 0 N N N 13.067 0.600  11.833 1.832  1.023  -0.914 H5A1 OCF 28 
OCF H5A2 H10  H 0 0 N N N 11.447 1.238  12.274 1.836  1.033  0.866  H5A2 OCF 29 
OCF HOP2 H11  H 0 0 N N N 8.577  0.106  10.352 4.558  2.045  2.133  HOP2 OCF 30 
OCF HOP3 H12  H 0 0 N N N 11.645 0.839  8.339  6.707  2.017  -0.179 HOP3 OCF 31 
OCF HB1  HB1  H 0 1 N N N 7.715  2.451  13.464 -4.486 -0.026 -0.892 HB1  OCF 32 
OCF HB2  HB2  H 0 1 N N N 6.057  1.764  13.388 -4.482 -0.016 0.888  HB2  OCF 33 
OCF HA1  HA1  H 0 1 N N N 8.043  1.462  15.681 -4.917 2.425  0.876  HA1  OCF 34 
OCF HA2  HA2  H 0 1 N N N 6.633  2.573  15.648 -4.922 2.415  -0.904 HA2  OCF 35 
OCF HOXT HOXT H 0 1 N N N 6.101  -0.841 17.204 -8.461 2.082  -0.003 HOXT OCF 36 
OCF H4A  H5   H 0 0 N N N 9.539  -0.422 12.376 -0.332 1.058  -0.019 H4A  OCF 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OCF O1P P    DOUB N N 1  
OCF O3P P    SING N N 2  
OCF P   O2P  SING N N 3  
OCF P   O4P  SING N N 4  
OCF O4P C5A  SING N N 5  
OCF C5A C5   SING N N 6  
OCF OG  CB   SING N N 7  
OCF OG  N    SING N N 8  
OCF C5  C6   DOUB Y N 9  
OCF C5  C4   SING Y N 10 
OCF C4A C4   SING N N 11 
OCF C4A N    DOUB N E 12 
OCF CB  CA   SING N N 13 
OCF C6  N1   SING Y N 14 
OCF C4  C3   DOUB Y N 15 
OCF N1  C2   DOUB Y N 16 
OCF C3  C2   SING Y N 17 
OCF C3  O3   SING N N 18 
OCF CA  C    SING N N 19 
OCF C2  C2A  SING N N 20 
OCF O   C    DOUB N N 21 
OCF C   OXT  SING N N 22 
OCF C2A H2A1 SING N N 23 
OCF C2A H2A2 SING N N 24 
OCF C2A H2A3 SING N N 25 
OCF O3  HO3  SING N N 26 
OCF C6  H6   SING N N 27 
OCF C5A H5A1 SING N N 28 
OCF C5A H5A2 SING N N 29 
OCF O2P HOP2 SING N N 30 
OCF O3P HOP3 SING N N 31 
OCF CB  HB1  SING N N 32 
OCF CB  HB2  SING N N 33 
OCF CA  HA1  SING N N 34 
OCF CA  HA2  SING N N 35 
OCF OXT HOXT SING N N 36 
OCF C4A H4A  SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OCF InChI            InChI                1.06    "InChI=1S/C11H15N2O8P/c1-7-11(16)9(5-13-20-3-2-10(14)15)8(4-12-7)6-21-22(17,18)19/h4-5,16H,2-3,6H2,1H3,(H,14,15)(H2,17,18,19)/b13-5+" 
OCF InChIKey         InChI                1.06    WFKOVQOIGDESOJ-WLRTZDKTSA-N                                                                                                           
OCF SMILES_CANONICAL CACTVS               3.385   "Cc1ncc(CO[P](O)(O)=O)c(\C=N\OCCC(O)=O)c1O"                                                                                           
OCF SMILES           CACTVS               3.385   "Cc1ncc(CO[P](O)(O)=O)c(C=NOCCC(O)=O)c1O"                                                                                             
OCF SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/OCCC(=O)O)O"                                                                                           
OCF SMILES           "OpenEye OEToolkits" 3.1.0.0 "Cc1c(c(c(cn1)COP(=O)(O)O)C=NOCCC(=O)O)O"                                                                                             
# 
_pdbx_chem_comp_identifier.comp_id           OCF 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "3-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]oxypropanoic acid" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      OCF 
_pdbx_chem_comp_synonyms.name         
;PYRIDOXAMINE-5'-PHOSPHATE linked to 3-aminooxypropionic acid
;
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OCF "Create component"   2022-09-04 PDBE 
OCF "Other modification" 2022-10-20 PDBE 
OCF "Initial release"    2022-11-16 RCSB 
# 
