data_UBF
# 
_chem_comp.id                                    UBF 
_chem_comp.name                                  "3-({3-[(2S)-2-amino-2-carboxyethyl]-5-bromo-2,6-dioxo-3,6-dihydropyrimidin-1(2H)-yl}methyl)thiophene-2-carboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H12 Br N3 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2007-09-11 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        418.220 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UBF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2QS2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UBF O23  O23  O  0 1 N N N -55.931 -1.230  18.215 6.092  0.914  -0.715 O23  UBF 1  
UBF C22  C22  C  0 1 N N N -56.582 -1.362  17.154 4.825  0.486  -0.888 C22  UBF 2  
UBF O24  O24  O  0 1 N N N -57.767 -0.998  17.051 4.473  0.045  -1.966 O24  UBF 3  
UBF C21  C21  C  0 1 Y N N -55.943 -1.963  15.956 3.872  0.551  0.222  C21  UBF 4  
UBF S20  S20  S  0 1 Y N N -56.574 -1.737  14.378 4.254  1.042  1.867  S20  UBF 5  
UBF C19  C19  C  0 1 Y N N -55.361 -2.690  13.573 2.638  0.809  2.361  C19  UBF 6  
UBF C18  C18  C  0 1 Y N N -54.474 -3.183  14.536 1.880  0.390  1.340  C18  UBF 7  
UBF C17  C17  C  0 1 Y N N -54.746 -2.821  15.869 2.542  0.246  0.144  C17  UBF 8  
UBF C16  C16  C  0 1 N N N -53.975 -3.193  17.092 1.870  -0.215 -1.123 C16  UBF 9  
UBF N3   N3   N  0 1 N N N -53.090 -4.320  16.844 0.438  -0.401 -0.877 N3   UBF 10 
UBF C4   C4   C  0 1 N N N -53.574 -5.636  16.680 -0.411 0.630  -1.047 C4   UBF 11 
UBF O15  O15  O  0 1 N N N -54.804 -5.865  16.726 0.021  1.709  -1.403 O15  UBF 12 
UBF C2   C2   C  0 1 N N N -51.717 -4.065  16.792 -0.026 -1.606 -0.487 C2   UBF 13 
UBF O14  O14  O  0 1 N N N -51.262 -2.912  16.938 0.741  -2.540 -0.338 O14  UBF 14 
UBF C1   C1   C  0 1 N N N -50.802 -5.200  16.565 -1.412 -1.774 -0.253 C1   UBF 15 
UBF BR13 BR13 BR 0 0 N N N -48.955 -4.820  16.500 -2.094 -3.451 0.296  BR13 UBF 16 
UBF C6   C6   C  0 1 N N N -51.326 -6.480  16.408 -2.241 -0.722 -0.425 C6   UBF 17 
UBF N5   N5   N  0 1 N N N -52.655 -6.701  16.466 -1.730 0.483  -0.828 N5   UBF 18 
UBF C7   C7   C  0 1 N N N -53.168 -8.070  16.319 -2.629 1.625  -1.015 C7   UBF 19 
UBF C8   C8   C  0 1 N N S -53.577 -8.576  17.719 -2.748 2.401  0.298  C8   UBF 20 
UBF N9   N9   N  0 1 N N N -52.510 -8.322  18.681 -3.175 1.490  1.368  N9   UBF 21 
UBF C10  C10  C  0 1 N N N -53.920 -10.039 17.671 -3.765 3.502  0.140  C10  UBF 22 
UBF O11  O11  O  0 1 N N N -53.272 -10.837 18.389 -3.424 4.649  -0.468 O11  UBF 23 
UBF O12  O12  O  0 1 N N N -54.835 -10.426 16.905 -4.887 3.352  0.561  O12  UBF 24 
UBF HO23 HO23 H  0 0 N N N -56.481 -0.827  18.876 6.685  0.851  -1.477 HO23 UBF 25 
UBF H19  H19  H  0 1 N N N -55.303 -2.870  12.510 2.275  0.978  3.364  H19  UBF 26 
UBF H18  H18  H  0 1 N N N -53.631 -3.804  14.273 0.826  0.185  1.448  H18  UBF 27 
UBF H161 1H16 H  0 0 N N N -53.370 -2.330  17.405 2.010  0.535  -1.902 H161 UBF 28 
UBF H162 2H16 H  0 0 N N N -54.690 -3.481  17.877 2.309  -1.159 -1.445 H162 UBF 29 
UBF H6   H6   H  0 1 N N N -50.657 -7.310  16.237 -3.301 -0.832 -0.252 H6   UBF 30 
UBF H71  1H7  H  0 1 N N N -54.039 -8.075  15.648 -2.227 2.280  -1.789 H71  UBF 31 
UBF H72  2H7  H  0 1 N N N -52.396 -8.723  15.887 -3.613 1.268  -1.317 H72  UBF 32 
UBF H8   H8   H  0 1 N N N -54.473 -8.027  18.045 -1.781 2.834  0.553  H8   UBF 33 
UBF HN91 1HN9 H  0 0 N N N -51.635 -8.264  18.201 -4.069 1.076  1.155  HN91 UBF 34 
UBF HN92 2HN9 H  0 0 N N N -52.688 -7.460  19.156 -2.478 0.780  1.537  HN92 UBF 35 
UBF HO11 HO11 H  0 0 N N N -53.589 -11.721 18.246 -4.110 5.326  -0.545 HO11 UBF 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UBF C19  S20  SING Y N 1  
UBF C19  C18  DOUB Y N 2  
UBF S20  C21  SING Y N 3  
UBF C18  C17  SING Y N 4  
UBF C17  C21  DOUB Y N 5  
UBF C17  C16  SING N N 6  
UBF C21  C22  SING N N 7  
UBF C7   N5   SING N N 8  
UBF C7   C8   SING N N 9  
UBF C6   N5   SING N N 10 
UBF C6   C1   DOUB N N 11 
UBF N5   C4   SING N N 12 
UBF BR13 C1   SING N N 13 
UBF C1   C2   SING N N 14 
UBF C4   O15  DOUB N N 15 
UBF C4   N3   SING N N 16 
UBF C2   N3   SING N N 17 
UBF C2   O14  DOUB N N 18 
UBF N3   C16  SING N N 19 
UBF O12  C10  DOUB N N 20 
UBF O24  C22  DOUB N N 21 
UBF C22  O23  SING N N 22 
UBF C10  C8   SING N N 23 
UBF C10  O11  SING N N 24 
UBF C8   N9   SING N N 25 
UBF O23  HO23 SING N N 26 
UBF C19  H19  SING N N 27 
UBF C18  H18  SING N N 28 
UBF C16  H161 SING N N 29 
UBF C16  H162 SING N N 30 
UBF C6   H6   SING N N 31 
UBF C7   H71  SING N N 32 
UBF C7   H72  SING N N 33 
UBF C8   H8   SING N N 34 
UBF N9   HN91 SING N N 35 
UBF N9   HN92 SING N N 36 
UBF O11  HO11 SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UBF SMILES           ACDLabs              10.04 "O=C(O)C(N)CN1C(=O)N(C(=O)C(Br)=C1)Cc2c(scc2)C(=O)O"                                                                                         
UBF SMILES_CANONICAL CACTVS               3.341 "N[C@@H](CN1C=C(Br)C(=O)N(Cc2ccsc2C(O)=O)C1=O)C(O)=O"                                                                                        
UBF SMILES           CACTVS               3.341 "N[CH](CN1C=C(Br)C(=O)N(Cc2ccsc2C(O)=O)C1=O)C(O)=O"                                                                                          
UBF SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1csc(c1CN2C(=O)C(=CN(C2=O)C[C@@H](C(=O)O)N)Br)C(=O)O"                                                                                      
UBF SMILES           "OpenEye OEToolkits" 1.5.0 "c1csc(c1CN2C(=O)C(=CN(C2=O)CC(C(=O)O)N)Br)C(=O)O"                                                                                           
UBF InChI            InChI                1.03  "InChI=1S/C13H12BrN3O6S/c14-7-4-16(5-8(15)11(19)20)13(23)17(10(7)18)3-6-1-2-24-9(6)12(21)22/h1-2,4,8H,3,5,15H2,(H,19,20)(H,21,22)/t8-/m0/s1" 
UBF InChIKey         InChI                1.03  KKTBJRLDYITGOV-QMMMGPOBSA-N                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
UBF "SYSTEMATIC NAME" ACDLabs              10.04 "3-({3-[(2S)-2-amino-2-carboxyethyl]-5-bromo-2,6-dioxo-3,6-dihydropyrimidin-1(2H)-yl}methyl)thiophene-2-carboxylic acid" 
UBF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-[[3-[(2S)-2-amino-3-hydroxy-3-oxo-propyl]-5-bromo-2,6-dioxo-pyrimidin-1-yl]methyl]thiophene-2-carboxylic acid"        
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UBF "Create component"     2007-09-11 RCSB 
UBF "Modify aromatic_flag" 2011-06-04 RCSB 
UBF "Modify descriptor"    2011-06-04 RCSB 
# 
