data_VFF
# 
_chem_comp.id                                    VFF 
_chem_comp.name                                  "methyl 4-[2,6-bis(azanyl)-5-(2-cyclopropylethynyl)pyrimidin-4-yl]benzoate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H16 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-06 
_chem_comp.pdbx_modified_date                    2024-03-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        308.335 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VFF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8CQ8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VFF C10 C1  C 0 1 N N N N N N 6.202  8.848  26.222 1.273  -3.763 -0.520 C10 VFF 1  
VFF C13 C2  C 0 1 Y N N N N N 9.625  5.175  28.548 -0.192 0.923  0.002  C13 VFF 2  
VFF C15 C3  C 0 1 Y N N N N N 7.960  6.131  30.059 1.822  2.067  -0.629 C15 VFF 3  
VFF C17 C4  C 0 1 N N N N N N 8.458  7.397  32.137 4.053  1.110  -0.075 C17 VFF 4  
VFF C21 C5  C 0 1 Y N N N N N 10.237 6.434  30.573 1.937  -0.038 0.559  C21 VFF 5  
VFF C22 C6  C 0 1 Y N N N N N 10.587 5.708  29.415 0.562  -0.098 0.583  C22 VFF 6  
VFF C02 C7  C 0 1 Y N N N N N 11.251 2.652  26.422 -3.716 1.925  0.205  C02 VFF 7  
VFF C04 C8  C 0 1 Y N N N N N 10.102 4.050  24.937 -3.747 -0.371 -0.034 C04 VFF 8  
VFF C06 C9  C 0 1 Y N N N N N 9.635  4.825  26.026 -2.338 -0.373 -0.071 C06 VFF 9  
VFF C07 C10 C 0 1 N N N N N N 8.810  5.923  25.799 -1.606 -1.595 -0.218 C07 VFF 10 
VFF C08 C11 C 0 1 N N N N N N 8.157  6.891  25.748 -1.006 -2.597 -0.339 C08 VFF 11 
VFF C09 C12 C 0 1 N N N N N N 7.441  8.098  25.822 -0.254 -3.853 -0.490 C09 VFF 12 
VFF C11 C13 C 0 1 N N N N N N 7.482  9.578  25.736 0.566  -4.335 0.710  C11 VFF 13 
VFF C12 C14 C 0 1 Y N N N N N 10.025 4.419  27.297 -1.672 0.861  0.035  C12 VFF 14 
VFF C14 C15 C 0 1 Y N N N N N 8.305  5.413  28.918 0.447  2.006  -0.603 C14 VFF 15 
VFF C16 C16 C 0 1 Y N N N N N 8.910  6.652  30.922 2.578  1.045  -0.048 C16 VFF 16 
VFF C19 C17 C 0 1 N N N N N N 8.936  8.531  34.173 6.226  0.255  0.421  C19 VFF 17 
VFF N01 N1  N 0 1 N N N N N N 12.083 1.539  26.570 -4.424 3.105  0.346  N01 VFF 18 
VFF N03 N2  N 0 1 Y N N N N N 10.916 2.946  25.107 -4.384 0.785  0.103  N03 VFF 19 
VFF N05 N3  N 0 1 N N N N N N 9.791  4.313  23.648 -4.454 -1.555 -0.140 N05 VFF 20 
VFF N23 N4  N 0 1 Y N N N N N 10.837 3.370  27.529 -2.394 1.972  0.170  N23 VFF 21 
VFF O18 O1  O 0 1 N N N N N N 9.389  7.819  33.022 4.781  0.125  0.485  O18 VFF 22 
VFF O20 O2  O 0 1 N N N N N N 7.299  7.659  32.405 4.610  2.052  -0.603 O20 VFF 23 
VFF H1  H1  H 0 1 N N N N N N 5.901  8.899  27.279 1.806  -4.462 -1.165 H1  VFF 24 
VFF H2  H2  H 0 1 N N N N N N 5.305  8.817  25.586 1.721  -2.773 -0.428 H2  VFF 25 
VFF H3  H3  H 0 1 N N N N N N 6.914  6.288  30.280 2.317  2.905  -1.098 H3  VFF 26 
VFF H4  H4  H 0 1 N N N N N N 11.020 6.830  31.203 2.520  -0.828 1.008  H4  VFF 27 
VFF H5  H5  H 0 1 N N N N N N 11.633 5.558  29.189 0.066  -0.935 1.051  H5  VFF 28 
VFF H6  H6  H 0 1 N N N N N N 7.098  8.007  24.781 -0.726 -4.611 -1.115 H6  VFF 29 
VFF H7  H7  H 0 1 N N N N N N 8.092  10.155 26.447 0.632  -5.410 0.874  H7  VFF 30 
VFF H8  H8  H 0 1 N N N N N N 7.496  10.074 24.754 0.547  -3.721 1.611  H8  VFF 31 
VFF H9  H9  H 0 1 N N N N N N 7.515  5.024  28.293 -0.137 2.796  -1.052 H9  VFF 32 
VFF H10 H10 H 0 1 N N N N N N 9.799  8.808  34.797 6.690  -0.604 0.907  H10 VFF 33 
VFF H11 H11 H 0 1 N N N N N N 8.406  9.441  33.856 6.541  0.295  -0.622 H11 VFF 34 
VFF H12 H12 H 0 1 N N N N N N 8.254  7.893  34.754 6.531  1.169  0.928  H12 VFF 35 
VFF H13 H13 H 0 1 N N N N N N 12.286 1.152  25.671 -3.951 3.949  0.418  H13 VFF 36 
VFF H14 H14 H 0 1 N N N N N N 12.935 1.817  27.014 -5.393 3.089  0.374  H14 VFF 37 
VFF H15 H15 H 0 1 N N N N N N 10.225 3.635  23.055 -5.423 -1.545 -0.114 H15 VFF 38 
VFF H16 H16 H 0 1 N N N N N N 8.799  4.272  23.530 -3.980 -2.395 -0.240 H16 VFF 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VFF N05 C04 SING N N 1  
VFF C04 N03 DOUB Y N 2  
VFF C04 C06 SING Y N 3  
VFF N03 C02 SING Y N 4  
VFF C11 C09 SING N N 5  
VFF C11 C10 SING N N 6  
VFF C08 C07 TRIP N N 7  
VFF C08 C09 SING N N 8  
VFF C07 C06 SING N N 9  
VFF C09 C10 SING N N 10 
VFF C06 C12 DOUB Y N 11 
VFF C02 N01 SING N N 12 
VFF C02 N23 DOUB Y N 13 
VFF C12 N23 SING Y N 14 
VFF C12 C13 SING N N 15 
VFF C13 C14 DOUB Y N 16 
VFF C13 C22 SING Y N 17 
VFF C14 C15 SING Y N 18 
VFF C22 C21 DOUB Y N 19 
VFF C15 C16 DOUB Y N 20 
VFF C21 C16 SING Y N 21 
VFF C16 C17 SING N N 22 
VFF C17 O20 DOUB N N 23 
VFF C17 O18 SING N N 24 
VFF O18 C19 SING N N 25 
VFF C10 H1  SING N N 26 
VFF C10 H2  SING N N 27 
VFF C15 H3  SING N N 28 
VFF C21 H4  SING N N 29 
VFF C22 H5  SING N N 30 
VFF C09 H6  SING N N 31 
VFF C11 H7  SING N N 32 
VFF C11 H8  SING N N 33 
VFF C14 H9  SING N N 34 
VFF C19 H10 SING N N 35 
VFF C19 H11 SING N N 36 
VFF C19 H12 SING N N 37 
VFF N01 H13 SING N N 38 
VFF N01 H14 SING N N 39 
VFF N05 H15 SING N N 40 
VFF N05 H16 SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VFF InChI            InChI                1.06  "InChI=1S/C17H16N4O2/c1-23-16(22)12-7-5-11(6-8-12)14-13(9-4-10-2-3-10)15(18)21-17(19)20-14/h5-8,10H,2-3H2,1H3,(H4,18,19,20,21)" 
VFF InChIKey         InChI                1.06  VQXXOXYFIZOZAI-UHFFFAOYSA-N                                                                                                     
VFF SMILES_CANONICAL CACTVS               3.385 "COC(=O)c1ccc(cc1)c2nc(N)nc(N)c2C#CC3CC3"                                                                                       
VFF SMILES           CACTVS               3.385 "COC(=O)c1ccc(cc1)c2nc(N)nc(N)c2C#CC3CC3"                                                                                       
VFF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC(=O)c1ccc(cc1)c2c(c(nc(n2)N)N)C#CC3CC3"                                                                                     
VFF SMILES           "OpenEye OEToolkits" 2.0.7 "COC(=O)c1ccc(cc1)c2c(c(nc(n2)N)N)C#CC3CC3"                                                                                     
# 
_pdbx_chem_comp_identifier.comp_id           VFF 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "methyl 4-[2,6-bis(azanyl)-5-(2-cyclopropylethynyl)pyrimidin-4-yl]benzoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VFF "Create component" 2023-03-06 PDBE 
VFF "Initial release"  2024-03-13 RCSB 
# 
