data_VGF
# 
_chem_comp.id                                    VGF 
_chem_comp.name                                  "1-(3,4-DICHLOROBENZYL)-7-PHENYL-1H-BENZIMIDAZOL-2-AMINE" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             ? 
_chem_comp.formula                               "C20 H15 Cl2 N3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-03-20 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        368.259 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VGF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2WD8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VGF CAN  CAN  C  0 1 Y N N 1.291  -13.864 14.863 -1.274 0.264  -0.349 CAN  VGF 1  
VGF CAS  CAS  C  0 1 Y N N 0.061  -14.439 15.176 -2.530 0.158  0.221  CAS  VGF 2  
VGF CLAC CLAC CL 0 0 N N N -0.618 -15.692 14.165 -3.220 1.513  1.059  CLAC VGF 3  
VGF CAR  CAR  C  0 1 Y N N -0.634 -14.004 16.316 -3.236 -1.028 0.123  CAR  VGF 4  
VGF CLAB CLAB CL 0 0 N N N -2.168 -14.720 16.703 -4.813 -1.163 0.837  CLAB VGF 5  
VGF CAK  CAK  C  0 1 Y N N -0.105 -13.000 17.123 -2.685 -2.107 -0.546 CAK  VGF 6  
VGF CAJ  CAJ  C  0 1 Y N N 1.128  -12.418 16.784 -1.430 -2.000 -1.115 CAJ  VGF 7  
VGF CAQ  CAQ  C  0 1 Y N N 1.833  -12.846 15.646 -0.725 -0.815 -1.016 CAQ  VGF 8  
VGF CAO  CAO  C  0 1 N N N 3.199  -12.219 15.270 0.643  -0.699 -1.638 CAO  VGF 9  
VGF NAY  NAY  N  0 1 Y N N 3.537  -11.241 16.313 1.647  -1.231 -0.712 NAY  VGF 10 
VGF CAX  CAX  C  0 1 Y N N 4.160  -11.501 17.477 2.402  -0.499 0.187  CAX  VGF 11 
VGF CAU  CAU  C  0 1 Y N N 3.252  -9.935  16.258 2.006  -2.541 -0.572 CAU  VGF 12 
VGF NAA  NAA  N  0 1 N N N 2.632  -9.329  15.245 1.473  -3.590 -1.291 NAA  VGF 13 
VGF NAP  NAP  N  0 1 Y N N 3.669  -9.333  17.368 2.932  -2.652 0.348  NAP  VGF 14 
VGF CAW  CAW  C  0 1 Y N N 4.219  -10.274 18.150 3.220  -1.424 0.854  CAW  VGF 15 
VGF CAM  CAM  C  0 1 Y N N 4.826  -10.218 19.415 4.108  -0.976 1.837  CAM  VGF 16 
VGF CAG  CAG  C  0 1 Y N N 5.335  -11.371 20.012 4.176  0.366  2.145  CAG  VGF 17 
VGF CAL  CAL  C  0 1 Y N N 5.259  -12.592 19.337 3.372  1.282  1.490  CAL  VGF 18 
VGF CAV  CAV  C  0 1 Y N N 4.673  -12.664 18.078 2.480  0.858  0.508  CAV  VGF 19 
VGF CAT  CAT  C  0 1 Y N N 4.589  -13.906 17.417 1.619  1.841  -0.192 CAT  VGF 20 
VGF CAH  CAH  C  0 1 Y N N 3.592  -14.826 17.756 0.734  2.637  0.533  CAH  VGF 21 
VGF CAE  CAE  C  0 1 Y N N 3.516  -16.058 17.086 -0.065 3.550  -0.124 CAE  VGF 22 
VGF CAD  CAD  C  0 1 Y N N 4.430  -16.370 16.085 0.010  3.676  -1.500 CAD  VGF 23 
VGF CAF  CAF  C  0 1 Y N N 5.428  -15.453 15.734 0.886  2.888  -2.224 CAF  VGF 24 
VGF CAI  CAI  C  0 1 Y N N 5.507  -14.230 16.402 1.695  1.976  -1.577 CAI  VGF 25 
VGF HAN  HAN  H  0 1 N N N 1.835  -14.214 13.998 -0.724 1.191  -0.276 HAN  VGF 26 
VGF HAK  HAK  H  0 1 N N N -0.638 -12.671 18.003 -3.235 -3.033 -0.623 HAK  VGF 27 
VGF HAJ  HAJ  H  0 1 N N N 1.538  -11.634 17.404 -1.000 -2.842 -1.636 HAJ  VGF 28 
VGF HAO1 HAO1 H  0 0 N N N 3.972  -12.999 15.217 0.670  -1.268 -2.567 HAO1 VGF 29 
VGF HAO2 HAO2 H  0 0 N N N 3.143  -11.731 14.286 0.860  0.349  -1.846 HAO2 VGF 30 
VGF HAA1 HAA1 H  0 0 N N N 1.673  -9.177  15.483 0.788  -3.423 -1.957 HAA1 VGF 31 
VGF HAA2 HAA2 H  0 0 N N N 3.073  -8.450  15.062 1.783  -4.495 -1.131 HAA2 VGF 32 
VGF HAM  HAM  H  0 1 N N N 4.899  -9.272  19.931 4.740  -1.681 2.355  HAM  VGF 33 
VGF HAG  HAG  H  0 1 N N N 5.786  -11.320 20.992 4.864  0.706  2.905  HAG  VGF 34 
VGF HAL  HAL  H  0 1 N N N 5.658  -13.485 19.796 3.435  2.330  1.741  HAL  VGF 35 
VGF HAH  HAH  H  0 1 N N N 2.880  -14.589 18.533 0.674  2.539  1.607  HAH  VGF 36 
VGF HAI  HAI  H  0 1 N N N 6.281  -13.525 16.137 2.382  1.365  -2.143 HAI  VGF 37 
VGF HAE  HAE  H  0 1 N N N 2.744  -16.766 17.349 -0.752 4.168  0.437  HAE  VGF 38 
VGF HAD  HAD  H  0 1 N N N 4.370  -17.321 15.578 -0.618 4.392  -2.010 HAD  VGF 39 
VGF HAF  HAF  H  0 1 N N N 6.133  -15.691 14.951 0.941  2.990  -3.298 HAF  VGF 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VGF CAN CAS  SING Y N 1  
VGF CAN CAQ  DOUB Y N 2  
VGF CAS CLAC SING N N 3  
VGF CAS CAR  DOUB Y N 4  
VGF CAR CLAB SING N N 5  
VGF CAR CAK  SING Y N 6  
VGF CAK CAJ  DOUB Y N 7  
VGF CAJ CAQ  SING Y N 8  
VGF CAQ CAO  SING N N 9  
VGF CAO NAY  SING N N 10 
VGF NAY CAX  SING Y N 11 
VGF NAY CAU  SING Y N 12 
VGF CAX CAW  SING Y N 13 
VGF CAX CAV  DOUB Y N 14 
VGF CAU NAA  SING N N 15 
VGF CAU NAP  DOUB Y N 16 
VGF NAP CAW  SING Y N 17 
VGF CAW CAM  DOUB Y N 18 
VGF CAM CAG  SING Y N 19 
VGF CAG CAL  DOUB Y N 20 
VGF CAL CAV  SING Y N 21 
VGF CAV CAT  SING Y N 22 
VGF CAT CAH  SING Y N 23 
VGF CAT CAI  DOUB Y N 24 
VGF CAH CAE  DOUB Y N 25 
VGF CAE CAD  SING Y N 26 
VGF CAD CAF  DOUB Y N 27 
VGF CAF CAI  SING Y N 28 
VGF CAN HAN  SING N N 29 
VGF CAK HAK  SING N N 30 
VGF CAJ HAJ  SING N N 31 
VGF CAO HAO1 SING N N 32 
VGF CAO HAO2 SING N N 33 
VGF NAA HAA1 SING N N 34 
VGF NAA HAA2 SING N N 35 
VGF CAM HAM  SING N N 36 
VGF CAG HAG  SING N N 37 
VGF CAL HAL  SING N N 38 
VGF CAH HAH  SING N N 39 
VGF CAI HAI  SING N N 40 
VGF CAE HAE  SING N N 41 
VGF CAD HAD  SING N N 42 
VGF CAF HAF  SING N N 43 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VGF SMILES           ACDLabs              10.04 "Clc1ccc(cc1Cl)Cn2c3c(nc2N)cccc3c4ccccc4"                                                                                    
VGF SMILES_CANONICAL CACTVS               3.352 "Nc1nc2cccc(c3ccccc3)c2n1Cc4ccc(Cl)c(Cl)c4"                                                                                  
VGF SMILES           CACTVS               3.352 "Nc1nc2cccc(c3ccccc3)c2n1Cc4ccc(Cl)c(Cl)c4"                                                                                  
VGF SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "c1ccc(cc1)c2cccc3c2n(c(n3)N)Cc4ccc(c(c4)Cl)Cl"                                                                              
VGF SMILES           "OpenEye OEToolkits" 1.6.1 "c1ccc(cc1)c2cccc3c2n(c(n3)N)Cc4ccc(c(c4)Cl)Cl"                                                                              
VGF InChI            InChI                1.03  "InChI=1S/C20H15Cl2N3/c21-16-10-9-13(11-17(16)22)12-25-19-15(14-5-2-1-3-6-14)7-4-8-18(19)24-20(25)23/h1-11H,12H2,(H2,23,24)" 
VGF InChIKey         InChI                1.03  JFVMZMBFRZPOFF-UHFFFAOYSA-N                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VGF "SYSTEMATIC NAME" ACDLabs              10.04 "1-(3,4-dichlorobenzyl)-7-phenyl-1H-benzimidazol-2-amine"      
VGF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "1-[(3,4-dichlorophenyl)methyl]-7-phenyl-benzimidazol-2-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VGF "Create component"     2009-03-20 EBI  
VGF "Modify aromatic_flag" 2011-06-04 RCSB 
VGF "Modify descriptor"    2011-06-04 RCSB 
# 
