data_VRF
# 
_chem_comp.id                                    VRF 
_chem_comp.name                                  "N-(2-{2-[(6-cyanonaphthalen-1-yl)oxy]phenoxy}ethyl)-N-methylprop-2-enamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H20 N2 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-15 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        372.417 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VRF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8U6K 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VRF N1  N1  N 0 1 N N N N N N 44.217 4.101  21.793 -2.175 -3.036 -0.676 N1  VRF 1  
VRF C1  C1  C 0 1 N N N N N N 44.899 4.146  23.077 -3.137 -4.030 -0.192 C1  VRF 2  
VRF C2  C2  C 0 1 N N N N N N 44.095 2.823  21.146 -0.948 -2.961 -0.124 C2  VRF 3  
VRF C3  C3  C 0 1 N N N N N N 44.686 1.630  21.858 -0.574 -3.877 0.965  C3  VRF 4  
VRF C4  C4  C 0 1 N N N N N N 45.376 0.796  21.120 0.637  -3.804 1.510  C4  VRF 5  
VRF C5  C5  C 0 1 N N N N N N 43.685 5.263  21.096 -2.545 -2.128 -1.765 C5  VRF 6  
VRF C6  C6  C 0 1 N N N N N N 44.606 5.477  19.881 -3.172 -0.861 -1.180 C6  VRF 7  
VRF C7  C7  C 0 1 Y N N N N N 46.274 7.222  19.619 -2.591 1.003  0.177  C7  VRF 8  
VRF O1  O1  O 0 1 N N N N N N 43.571 2.696  20.084 -0.149 -2.137 -0.526 O1  VRF 9  
VRF C8  C8  C 0 1 Y N N N N N 46.722 7.673  18.387 -3.892 1.453  0.020  C8  VRF 10 
VRF C9  C9  C 0 1 Y N N N N N 48.033 8.093  18.263 -4.294 2.631  0.622  C9  VRF 11 
VRF C10 C10 C 0 1 Y N N N N N 48.893 8.080  19.359 -3.400 3.363  1.382  C10 VRF 12 
VRF O2  O2  O 0 1 N N N N N N 44.941 6.826  19.756 -2.193 -0.154 -0.415 O2  VRF 13 
VRF C11 C11 C 0 1 Y N N N N N 48.442 7.649  20.589 -2.101 2.920  1.543  C11 VRF 14 
VRF C12 C12 C 0 1 Y N N N N N 47.129 7.226  20.719 -1.689 1.743  0.938  C12 VRF 15 
VRF C13 C13 C 0 1 Y N N N N N 46.694 7.839  22.901 0.475  1.568  0.094  C13 VRF 16 
VRF C14 C14 C 0 1 Y N N N N N 46.035 9.020  22.618 0.104  2.351  -0.976 C14 VRF 17 
VRF C15 C15 C 0 1 Y N N N N N 45.997 10.046 23.550 1.004  2.628  -2.002 C15 VRF 18 
VRF C16 C16 C 0 1 Y N N N N N 46.613 9.919  24.783 2.272  2.136  -1.975 C16 VRF 19 
VRF C17 C17 C 0 1 Y N N N N N 47.271 8.745  25.080 2.691  1.333  -0.899 C17 VRF 20 
VRF C18 C18 C 0 1 Y N N N N N 47.309 7.712  24.143 1.782  1.044  0.151  C18 VRF 21 
VRF C19 C19 C 0 1 Y N N N N N 47.979 6.552  24.468 2.195  0.242  1.228  C19 VRF 22 
VRF C20 C20 C 0 1 Y N N N N N 48.603 6.429  25.703 3.459  -0.254 1.263  C20 VRF 23 
VRF C21 C21 C 0 1 Y N N N N N 48.566 7.462  26.617 4.370  0.026  0.229  C21 VRF 24 
VRF C22 C22 C 0 1 N N N N N N 49.268 7.287  27.957 5.698  -0.507 0.288  C22 VRF 25 
VRF C23 C23 C 0 1 Y N N N N N 47.895 8.626  26.307 3.992  0.812  -0.848 C23 VRF 26 
VRF N2  N2  N 0 1 N N N N N N 49.792 7.146  28.951 6.751  -0.931 0.335  N2  VRF 27 
VRF O3  O3  O 0 1 N N N N N N 46.705 6.787  21.967 -0.410 1.309  1.091  O3  VRF 28 
VRF H1  H1  H 0 1 N N N N N N 45.195 3.128  23.371 -3.727 -3.600 0.617  H1  VRF 29 
VRF H2  H2  H 0 1 N N N N N N 45.795 4.779  22.994 -3.798 -4.323 -1.008 H2  VRF 30 
VRF H3  H3  H 0 1 N N N N N N 44.223 4.565  23.837 -2.601 -4.906 0.174  H3  VRF 31 
VRF H4  H4  H 0 1 N N N N N N 44.548 1.473  22.917 -1.283 -4.610 1.321  H4  VRF 32 
VRF H5  H5  H 0 1 N N N N N N 45.825 -0.078 21.569 1.346  -3.071 1.153  H5  VRF 33 
VRF H6  H6  H 0 1 N N N N N N 45.496 0.982  20.063 0.911  -4.476 2.309  H6  VRF 34 
VRF H7  H7  H 0 1 N N N N N N 43.704 6.146  21.752 -1.655 -1.863 -2.335 H7  VRF 35 
VRF H8  H8  H 0 1 N N N N N N 42.653 5.073  20.766 -3.264 -2.620 -2.420 H8  VRF 36 
VRF H10 H9  H 0 1 N N N N N N 44.086 5.147  18.970 -3.528 -0.224 -1.991 H10 VRF 37 
VRF H9  H10 H 0 1 N N N N N N 45.524 4.886  20.014 -4.009 -1.133 -0.538 H9  VRF 38 
VRF H11 H11 H 0 1 N N N N N N 46.056 7.696  17.537 -4.592 0.883  -0.573 H11 VRF 39 
VRF H12 H12 H 0 1 N N N N N N 48.395 8.435  17.305 -5.308 2.980  0.498  H12 VRF 40 
VRF H13 H13 H 0 1 N N N N N N 49.916 8.408  19.245 -3.718 4.282  1.850  H13 VRF 41 
VRF H14 H14 H 0 1 N N N N N N 49.105 7.641  21.442 -1.405 3.493  2.137  H14 VRF 42 
VRF H15 H15 H 0 1 N N N N N N 45.546 9.145  21.663 -0.897 2.753  -1.021 H15 VRF 43 
VRF H16 H16 H 0 1 N N N N N N 45.477 10.961 23.309 0.690  3.244  -2.832 H16 VRF 44 
VRF H17 H17 H 0 1 N N N N N N 46.579 10.726 25.500 2.956  2.361  -2.780 H17 VRF 45 
VRF H18 H18 H 0 1 N N N N N N 48.019 5.737  23.761 1.506  0.019  2.030  H18 VRF 46 
VRF H19 H19 H 0 1 N N N N N N 49.123 5.515  25.950 3.768  -0.869 2.094  H19 VRF 47 
VRF H20 H20 H 0 1 N N N N N N 47.857 9.438  27.018 4.695  1.024  -1.641 H20 VRF 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VRF C9  C8  DOUB Y N 1  
VRF C9  C10 SING Y N 2  
VRF C8  C7  SING Y N 3  
VRF C10 C11 DOUB Y N 4  
VRF C7  O2  SING N N 5  
VRF C7  C12 DOUB Y N 6  
VRF O2  C6  SING N N 7  
VRF C6  C5  SING N N 8  
VRF O1  C2  DOUB N N 9  
VRF C11 C12 SING Y N 10 
VRF C12 O3  SING N N 11 
VRF C5  N1  SING N N 12 
VRF C4  C3  DOUB N N 13 
VRF C2  N1  SING N N 14 
VRF C2  C3  SING N N 15 
VRF N1  C1  SING N N 16 
VRF O3  C13 SING N N 17 
VRF C14 C13 DOUB Y N 18 
VRF C14 C15 SING Y N 19 
VRF C13 C18 SING Y N 20 
VRF C15 C16 DOUB Y N 21 
VRF C18 C19 DOUB Y N 22 
VRF C18 C17 SING Y N 23 
VRF C19 C20 SING Y N 24 
VRF C16 C17 SING Y N 25 
VRF C17 C23 DOUB Y N 26 
VRF C20 C21 DOUB Y N 27 
VRF C23 C21 SING Y N 28 
VRF C21 C22 SING N N 29 
VRF C22 N2  TRIP N N 30 
VRF C1  H1  SING N N 31 
VRF C1  H2  SING N N 32 
VRF C1  H3  SING N N 33 
VRF C3  H4  SING N N 34 
VRF C4  H5  SING N N 35 
VRF C4  H6  SING N N 36 
VRF C5  H7  SING N N 37 
VRF C5  H8  SING N N 38 
VRF C6  H10 SING N N 39 
VRF C6  H9  SING N N 40 
VRF C8  H11 SING N N 41 
VRF C9  H12 SING N N 42 
VRF C10 H13 SING N N 43 
VRF C11 H14 SING N N 44 
VRF C14 H15 SING N N 45 
VRF C15 H16 SING N N 46 
VRF C16 H17 SING N N 47 
VRF C19 H18 SING N N 48 
VRF C20 H19 SING N N 49 
VRF C23 H20 SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VRF SMILES           ACDLabs              12.01 "C=CC(=O)N(C)CCOc1ccccc1Oc1cccc2cc(C#N)ccc21"                                                                                      
VRF InChI            InChI                1.06  "InChI=1S/C23H20N2O3/c1-3-23(26)25(2)13-14-27-21-8-4-5-9-22(21)28-20-10-6-7-18-15-17(16-24)11-12-19(18)20/h3-12,15H,1,13-14H2,2H3" 
VRF InChIKey         InChI                1.06  WLNNVBKTQQOUDW-UHFFFAOYSA-N                                                                                                        
VRF SMILES_CANONICAL CACTVS               3.385 "CN(CCOc1ccccc1Oc2cccc3cc(ccc23)C#N)C(=O)C=C"                                                                                      
VRF SMILES           CACTVS               3.385 "CN(CCOc1ccccc1Oc2cccc3cc(ccc23)C#N)C(=O)C=C"                                                                                      
VRF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(CCOc1ccccc1Oc2cccc3c2ccc(c3)C#N)C(=O)C=C"                                                                                      
VRF SMILES           "OpenEye OEToolkits" 2.0.7 "CN(CCOc1ccccc1Oc2cccc3c2ccc(c3)C#N)C(=O)C=C"                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VRF "SYSTEMATIC NAME" ACDLabs              12.01 "N-(2-{2-[(6-cyanonaphthalen-1-yl)oxy]phenoxy}ethyl)-N-methylprop-2-enamide"      
VRF "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[2-[2-(6-cyanonaphthalen-1-yl)oxyphenoxy]ethyl]-~{N}-methyl-prop-2-enamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VRF "Create component" 2023-09-15 RCSB 
VRF "Initial release"  2023-11-08 RCSB 
# 
