data_W2F
# 
_chem_comp.id                                    W2F 
_chem_comp.name                                  "4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-chloranyl-benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H12 Cl N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-04-25 
_chem_comp.pdbx_modified_date                    2023-11-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        281.695 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     W2F 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8OU4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
W2F N1  N1  N  0 1 N N N N N N 23.671 16.035 -8.093  3.938  0.231  -1.013 N1  W2F 1  
W2F N2  N2  N  0 1 N N N N N N 26.085 18.785 -8.159  0.681  -0.600 0.358  N2  W2F 2  
W2F C3  C1  C  0 1 N N N N N N 22.558 16.523 -7.440  4.811  -0.248 -0.113 C3  W2F 3  
W2F C4  C2  C  0 1 N N N N N N 22.681 17.869 -6.800  4.357  -0.705 1.248  C4  W2F 4  
W2F C5  C3  C  0 1 N N N N N N 23.747 18.748 -7.440  2.915  -1.213 1.154  C5  W2F 5  
W2F C7  C4  C  0 1 Y N N N N N 28.219 19.934 -8.369  -1.727 -0.242 0.135  C7  W2F 6  
W2F C9  C5  C  0 1 Y N N N N N 29.015 20.877 -10.461 -4.082 0.176  -0.089 C9  W2F 7  
W2F C11 C6  C  0 1 Y N N N N N 30.451 20.854 -8.531  -3.225 -2.076 -0.218 C11 W2F 8  
W2F C12 C7  C  0 1 Y N N N N N 29.456 20.241 -7.793  -1.954 -1.611 -0.032 C12 W2F 9  
W2F C1  C8  C  0 1 N N S N N N 25.065 17.992 -7.497  2.044  -0.101 0.558  C1  W2F 10 
W2F C2  C9  C  0 1 N N N N N N 24.908 16.639 -8.183  2.624  0.328  -0.764 C2  W2F 11 
W2F C6  C10 C  0 1 N N N N N N 27.170 19.258 -7.531  -0.355 0.261  0.335  C6  W2F 12 
W2F O1  O1  O  0 1 N N N N N N 27.327 19.133 -6.318  -0.159 1.452  0.480  O1  W2F 13 
W2F C8  C11 C  0 1 Y N N N N N 28.025 20.259 -9.707  -2.803 0.652  0.105  C8  W2F 14 
W2F C10 C12 C  0 1 Y N N N N N 30.243 21.179 -9.872  -4.298 -1.189 -0.254 C10 W2F 15 
W2F N3  N3  N  0 1 N N N N N N 31.237 21.791 -10.608 -5.588 -1.669 -0.449 N3  W2F 16 
W2F CL1 CL1 CL 0 0 N N N N N N 26.522 19.917 -10.510 -2.529 2.353  0.312  CL1 W2F 17 
W2F O2  O2  O  0 1 N N N N N N 21.537 15.866 -7.396  5.986  -0.314 -0.401 O2  W2F 18 
W2F O3  O3  O  0 1 N N N N N N 25.825 16.100 -8.773  1.887  0.761  -1.624 O3  W2F 19 
W2F H2  H1  H  0 1 N N N N N N 23.571 15.151 -8.549  4.272  0.523  -1.876 H2  W2F 20 
W2F H7  H2  H  0 1 N N N N N N 25.972 18.988 -9.132  0.525  -1.551 0.243  H7  W2F 21 
W2F H4  H3  H  0 1 N N N N N N 22.936 17.729 -5.739  5.005  -1.510 1.596  H4  W2F 22 
W2F H3  H4  H  0 1 N N N N N N 21.712 18.383 -6.880  4.406  0.129  1.948  H3  W2F 23 
W2F H5  H5  H  0 1 N N N N N N 23.875 19.662 -6.842  2.877  -2.092 0.510  H5  W2F 24 
W2F H6  H6  H  0 1 N N N N N N 23.435 19.018 -8.460  2.552  -1.472 2.148  H6  W2F 25 
W2F H8  H7  H  0 1 N N N N N N 28.835 21.122 -11.497 -4.916 0.862  -0.116 H8  W2F 26 
W2F H9  H8  H  0 1 N N N N N N 31.398 21.084 -8.066  -3.397 -3.134 -0.347 H9  W2F 27 
W2F H10 H9  H  0 1 N N N N N N 29.636 19.996 -6.757  -1.124 -2.302 -0.014 H10 W2F 28 
W2F H1  H10 H  0 1 N N N N N N 25.386 17.804 -6.462  2.024  0.750  1.238  H1  W2F 29 
W2F H12 H11 H  0 1 N N N N N N 32.042 21.931 -10.031 -6.337 -1.053 -0.470 H12 W2F 30 
W2F H11 H12 H  0 1 N N N N N N 31.481 21.211 -11.385 -5.740 -2.620 -0.564 H11 W2F 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
W2F N3  C10 SING N N 1  
W2F CL1 C8  SING N N 2  
W2F C9  C10 DOUB Y N 3  
W2F C9  C8  SING Y N 4  
W2F C10 C11 SING Y N 5  
W2F C8  C7  DOUB Y N 6  
W2F O3  C2  DOUB N N 7  
W2F C11 C12 DOUB Y N 8  
W2F C7  C12 SING Y N 9  
W2F C7  C6  SING N N 10 
W2F C2  N1  SING N N 11 
W2F C2  C1  SING N N 12 
W2F N2  C6  SING N N 13 
W2F N2  C1  SING N N 14 
W2F N1  C3  SING N N 15 
W2F C6  O1  DOUB N N 16 
W2F C1  C5  SING N N 17 
W2F C5  C4  SING N N 18 
W2F C3  O2  DOUB N N 19 
W2F C3  C4  SING N N 20 
W2F N1  H2  SING N N 21 
W2F N2  H7  SING N N 22 
W2F C4  H4  SING N N 23 
W2F C4  H3  SING N N 24 
W2F C5  H5  SING N N 25 
W2F C5  H6  SING N N 26 
W2F C9  H8  SING N N 27 
W2F C11 H9  SING N N 28 
W2F C12 H10 SING N N 29 
W2F C1  H1  SING N N 30 
W2F N3  H12 SING N N 31 
W2F N3  H11 SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
W2F InChI            InChI                1.06  "InChI=1S/C12H12ClN3O3/c13-8-5-6(14)1-2-7(8)11(18)15-9-3-4-10(17)16-12(9)19/h1-2,5,9H,3-4,14H2,(H,15,18)(H,16,17,19)/t9-/m0/s1" 
W2F InChIKey         InChI                1.06  ODBDBMXVJIBLEY-VIFPVBQESA-N                                                                                                     
W2F SMILES_CANONICAL CACTVS               3.385 "Nc1ccc(c(Cl)c1)C(=O)N[C@H]2CCC(=O)NC2=O"                                                                                       
W2F SMILES           CACTVS               3.385 "Nc1ccc(c(Cl)c1)C(=O)N[CH]2CCC(=O)NC2=O"                                                                                        
W2F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1N)Cl)C(=O)N[C@H]2CCC(=O)NC2=O"                                                                                       
W2F SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1N)Cl)C(=O)NC2CCC(=O)NC2=O"                                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           W2F 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "4-azanyl-~{N}-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2-chloranyl-benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
W2F "Create component" 2023-04-25 PDBE 
W2F "Initial release"  2023-11-15 RCSB 
# 
