data_YAF
# 
_chem_comp.id                                    YAF 
_chem_comp.name                                  "[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(1R,3S,3aS,13R)-3-[3-(dimethylcarbamoyl)phenyl]-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C39 H48 N10 O17 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-01-19 
_chem_comp.pdbx_modified_date                    2024-08-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        990.803 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YAF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8FRV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YAF C4  C1  C 0 1 Y N N N N N -6.904  59.919 83.467 5.845   0.250  1.478  C4  YAF 1   
YAF C14 C2  C 0 1 Y N N N N N -7.072  52.687 84.740 8.210   -1.279 -0.131 C14 YAF 2   
YAF C5  C3  C 0 1 Y N N N N N -7.362  59.300 82.345 6.481   1.279  2.163  C5  YAF 3   
YAF C6  C4  C 0 1 Y N N N N N -7.278  59.889 81.108 7.255   0.980  3.280  C6  YAF 4   
YAF C11 C5  C 0 1 N N S N N N -7.072  56.008 83.097 7.480   2.423  -0.341 C11 YAF 5   
YAF C7  C6  C 0 1 Y N N N N N -6.708  61.117 80.979 7.386   -0.328 3.704  C7  YAF 6   
YAF C8  C7  C 0 1 N N N N N N -6.600  61.775 79.642 8.226   -0.644 4.915  C8  YAF 7   
YAF C9  C8  C 0 1 N N R N N N -7.516  57.275 81.282 7.705   3.260  1.950  C9  YAF 8   
YAF C10 C9  C 0 1 N N N N N N -6.362  56.469 81.845 8.528   2.771  0.738  C10 YAF 9   
YAF C12 C10 C 0 1 Y N N N N N -6.514  54.889 83.948 7.556   0.960  -0.695 C12 YAF 10  
YAF C13 C11 C 0 1 Y N N N N N -7.379  53.818 84.023 8.137   0.066  0.186  C13 YAF 11  
YAF N1  N1  N 0 1 N N N N N N -7.917  58.086 82.379 6.370   2.619  1.768  N1  YAF 12  
YAF N2  N2  N 0 1 N N N N N N -2.530  53.522 85.502 6.929   -2.534 -3.981 N2  YAF 13  
YAF C3  C12 C 0 1 Y N N N N N -6.330  61.172 83.362 5.985   -1.063 1.906  C3  YAF 14  
YAF N3  N3  N 0 1 N N N N N N -9.577  56.316 84.890 4.732   4.416  -0.867 N3  YAF 15  
YAF C1  C13 C 0 1 N N N N N N -5.607  63.130 82.002 6.897   -2.774 3.489  C1  YAF 16  
YAF C15 C14 C 0 1 Y N N N N N -5.873  52.626 85.392 7.705   -1.737 -1.330 C15 YAF 17  
YAF C16 C15 C 0 1 Y N N N N N -4.972  53.670 85.326 7.113   -0.841 -2.222 C16 YAF 18  
YAF C17 C16 C 0 1 N N N N N N -3.716  53.418 86.099 6.568   -1.324 -3.508 C17 YAF 19  
YAF C18 C17 C 0 1 N N N N N N -1.321  53.625 86.301 6.538   -2.938 -5.333 C18 YAF 20  
YAF C19 C18 C 0 1 N N N N N N -2.325  53.464 84.061 7.711   -3.444 -3.141 C19 YAF 21  
YAF C2  C19 C 0 1 Y N N N N N -6.226  61.776 82.142 6.750   -1.349 3.021  C2  YAF 22  
YAF C20 C20 C 0 1 Y N N N N N -5.293  54.809 84.600 7.036   0.513  -1.893 C20 YAF 23  
YAF C21 C21 C 0 1 N N S N N N -7.846  57.264 83.567 6.123   2.747  0.318  C21 YAF 24  
YAF C22 C22 C 0 1 N N N N N N -9.172  56.610 83.681 5.747   4.162  -0.024 C22 YAF 25  
YAF C23 C23 C 0 1 N N N N N N -8.932  56.785 85.971 3.993   3.421  -1.385 C23 YAF 26  
YAF C24 C24 C 0 1 N N N N N N -7.621  58.083 84.787 5.073   1.787  -0.147 C24 YAF 27  
YAF C25 C25 C 0 1 N N N N N N -6.453  59.890 85.898 4.258   -0.524 -0.283 C25 YAF 28  
YAF C26 C26 C 0 1 N N S N N N -7.375  60.832 86.565 2.865   -0.547 0.350  C26 YAF 29  
YAF C27 C27 C 0 1 N N S N N N -6.617  61.737 87.520 2.024   -1.643 -0.309 C27 YAF 30  
YAF C28 C28 C 0 1 N N R N N N -7.499  62.388 88.562 0.632   -1.666 0.324  C28 YAF 31  
YAF C29 C29 C 0 1 N N N N N N -6.684  63.206 89.525 -0.209  -2.761 -0.335 C29 YAF 32  
YAF C30 C30 C 0 1 N N N N N N -6.111  69.681 89.614 -8.012  -2.525 0.575  C30 YAF 33  
YAF C31 C31 C 0 1 N N R N N N -6.906  70.943 89.730 -8.605  -1.326 1.317  C31 YAF 34  
YAF C32 C32 C 0 1 N N R N N N -6.225  73.029 89.093 -9.263  0.837  0.818  C32 YAF 35  
YAF C33 C33 C 0 1 Y N N N N N -3.941  73.616 88.466 -8.474  1.816  -1.370 C33 YAF 36  
YAF C34 C34 C 0 1 Y N N N N N -3.787  75.537 89.312 -9.309  3.816  -1.286 C34 YAF 37  
YAF C35 C35 C 0 1 Y N N N N N -3.472  76.809 89.782 -9.735  5.143  -1.470 C35 YAF 38  
YAF C36 C36 C 0 1 Y N N N N N -5.588  76.886 90.657 -10.799 5.048  0.576  C36 YAF 39  
YAF C37 C37 C 0 1 Y N N N N N -5.035  75.076 89.582 -9.684  3.157  -0.104 C37 YAF 40  
YAF C38 C38 C 0 1 N N R N N N -6.609  72.294 87.838 -10.522 -0.028 0.554  C38 YAF 41  
YAF C39 C39 C 0 1 N N S N N N -7.643  71.390 88.472 -10.144 -1.367 1.234  C39 YAF 42  
YAF N10 N4  N 0 1 Y N N N N N -5.999  75.704 90.247 -10.422 3.805  0.791  N10 YAF 43  
YAF N4  N5  N 0 1 N N N N N N -8.025  57.692 85.929 4.133   2.154  -0.980 N4  YAF 44  
YAF N5  N6  N 0 1 N N N N N N -7.030  59.270 84.698 5.063   0.525  0.348  N5  YAF 45  
YAF N6  N7  N 0 1 Y N N N N N -5.103  73.845 89.032 -9.143  1.898  -0.185 N6  YAF 46  
YAF N7  N8  N 0 1 Y N N N N N -3.095  74.597 88.593 -8.573  2.943  -2.014 N7  YAF 47  
YAF N8  N9  N 0 1 N N N N N N -2.313  77.400 89.587 -9.397  5.843  -2.615 N8  YAF 48  
YAF N9  N10 N 0 1 Y N N N N N -4.410  77.468 90.471 -10.470 5.709  -0.519 N9  YAF 49  
YAF O1  O1  O 0 1 N N N N N N -8.618  56.500 81.036 7.583   4.684  1.931  O1  YAF 50  
YAF O10 O2  O 0 1 N N N N N N -7.562  66.174 91.312 -2.832  -3.665 -1.775 O10 YAF 51  
YAF O11 O3  O 0 1 N N N N N N -5.782  66.446 89.786 -4.101  -3.286 0.374  O11 YAF 52  
YAF O12 O4  O 0 1 N N N N N N -7.938  66.660 88.758 -5.976  -5.090 0.752  O12 YAF 53  
YAF O13 O5  O 0 1 N N N N N N -5.853  67.773 87.830 -5.876  -3.722 -1.367 O13 YAF 54  
YAF O14 O6  O 0 1 N N N N N N -6.939  68.567 89.866 -6.593  -2.535 0.742  O14 YAF 55  
YAF O15 O7  O 0 1 N N N N N N -5.964  71.996 89.984 -8.175  -0.104 0.695  O15 YAF 56  
YAF O16 O8  O 0 1 N N N N N N -7.196  73.214 86.963 -11.675 0.549  1.170  O16 YAF 57  
YAF O17 O9  O 0 1 N N N N N N -8.724  72.230 88.830 -10.714 -1.442 2.542  O17 YAF 58  
YAF O2  O10 O 0 1 N N N N N N -3.808  52.983 87.236 5.795   -0.631 -4.140 O2  YAF 59  
YAF O3  O11 O 0 1 N N N N N N -9.812  56.315 82.711 6.367   5.082  0.464  O3  YAF 60  
YAF O4  O12 O 0 1 N N N N N N -9.243  56.356 87.038 3.175   3.680  -2.248 O4  YAF 61  
YAF O5  O13 O 0 1 N N N N N N -7.814  61.634 85.570 2.982   -0.813 1.749  O5  YAF 62  
YAF O6  O14 O 0 1 N N N N N N -5.718  60.985 88.217 1.907   -1.376 -1.708 O6  YAF 63  
YAF O7  O15 O 0 1 N N N N N N -8.430  63.199 87.873 0.749   -1.932 1.723  O7  YAF 64  
YAF O8  O16 O 0 1 N N N N N N -7.282  64.455 89.862 -1.544  -2.707 0.173  O8  YAF 65  
YAF O9  O17 O 0 1 N N N N N N -5.522  64.825 91.643 -2.329  -5.216 0.151  O9  YAF 66  
YAF P1  P1  P 0 1 N N N N N N -6.466  65.441 90.732 -2.704  -3.718 -0.302 P1  YAF 67  
YAF P2  P2  P 0 1 N N N N N N -6.683  67.359 88.938 -5.641  -3.660 0.093  P2  YAF 68  
YAF H1  H1  H 0 1 N N N N N N -7.766  51.861 84.787 8.669   -1.972 0.560  H1  YAF 69  
YAF H2  H2  H 0 1 N N N N N N -7.664  59.378 80.238 7.754   1.772  3.818  H2  YAF 70  
YAF H3  H3  H 0 1 N N N N N N -7.906  55.465 82.629 7.627   3.036  -1.230 H3  YAF 71  
YAF H4  H4  H 0 1 N N N N N N -7.502  62.377 79.455 7.602   -0.609 5.808  H4  YAF 72  
YAF H5  H5  H 0 1 N N N N N N -5.714  62.427 79.625 8.654   -1.641 4.810  H5  YAF 73  
YAF H6  H6  H 0 1 N N N N N N -6.504  61.006 78.862 9.028   0.089  5.002  H6  YAF 74  
YAF H7  H7  H 0 1 N N N N N N -7.196  57.869 80.413 8.164   2.929  2.882  H7  YAF 75  
YAF H8  H8  H 0 1 N N N N N N -6.071  55.633 81.192 9.107   1.887  1.004  H8  YAF 76  
YAF H9  H9  H 0 1 N N N N N N -5.480  57.089 82.063 9.188   3.563  0.383  H9  YAF 77  
YAF H10 H10 H 0 1 N N N N N N -8.324  53.870 83.504 8.534   0.419  1.126  H10 YAF 78  
YAF H11 H11 H 0 1 N N N N N N -5.964  61.674 84.246 5.491   -1.861 1.371  H11 YAF 79  
YAF H12 H12 H 0 1 N N N N N N -10.380 55.732 85.011 4.528   5.334  -1.104 H12 YAF 80  
YAF H13 H13 H 0 1 N N N N N N -6.384  63.902 82.105 6.107   -3.005 4.203  H13 YAF 81  
YAF H14 H14 H 0 1 N N N N N N -4.847  63.268 82.785 6.823   -3.446 2.634  H14 YAF 82  
YAF H15 H15 H 0 1 N N N N N N -5.134  63.216 81.013 7.868   -2.901 3.967  H15 YAF 83  
YAF H16 H16 H 0 1 N N N N N N -5.626  51.747 85.968 7.767   -2.786 -1.579 H16 YAF 84  
YAF H17 H17 H 0 1 N N N N N N -1.588  53.662 87.368 7.310   -2.635 -6.041 H17 YAF 85  
YAF H18 H18 H 0 1 N N N N N N -0.682  52.750 86.113 6.418   -4.021 -5.369 H18 YAF 86  
YAF H19 H19 H 0 1 N N N N N N -0.778  54.541 86.027 5.595   -2.460 -5.597 H19 YAF 87  
YAF H20 H20 H 0 1 N N N N N N -1.254  53.576 83.838 7.102   -3.778 -2.301 H20 YAF 88  
YAF H21 H21 H 0 1 N N N N N N -2.680  52.495 83.679 8.021   -4.307 -3.731 H21 YAF 89  
YAF H22 H22 H 0 1 N N N N N N -2.887  54.277 83.578 8.594   -2.925 -2.767 H22 YAF 90  
YAF H23 H23 H 0 1 N N N N N N -4.594  55.630 84.543 6.582   1.212  -2.580 H23 YAF 91  
YAF H25 H25 H 0 1 N N N N N N -6.190  59.095 86.611 4.740   -1.490 -0.136 H25 YAF 92  
YAF H26 H26 H 0 1 N N N N N N -5.544  60.437 85.607 4.169   -0.321 -1.350 H26 YAF 93  
YAF H27 H27 H 0 1 N N N N N N -8.183  60.300 87.089 2.383   0.419  0.203  H27 YAF 94  
YAF H28 H28 H 0 1 N N N N N N -6.111  62.522 86.940 2.507   -2.609 -0.162 H28 YAF 95  
YAF H29 H29 H 0 1 N N N N N N -8.025  61.600 89.121 0.149   -0.700 0.177  H29 YAF 96  
YAF H30 H30 H 0 1 N N N N N N -6.550  62.624 90.449 -0.225  -2.608 -1.414 H30 YAF 97  
YAF H31 H31 H 0 1 N N N N N N -5.702  63.402 89.070 0.225   -3.736 -0.113 H31 YAF 98  
YAF H32 H32 H 0 1 N N N N N N -5.695  69.604 88.599 -8.432  -3.447 0.979  H32 YAF 99  
YAF H33 H33 H 0 1 N N N N N N -5.290  69.698 90.346 -8.253  -2.451 -0.486 H33 YAF 100 
YAF H34 H34 H 0 1 N N N N N N -7.622  70.856 90.560 -8.288  -1.342 2.360  H34 YAF 101 
YAF H35 H35 H 0 1 N N N N N N -7.094  73.610 89.435 -9.292  1.261  1.822  H35 YAF 102 
YAF H36 H36 H 0 1 N N N N N N -3.709  72.700 87.944 -7.938  0.947  -1.720 H36 YAF 103 
YAF H37 H37 H 0 1 N N N N N N -6.308  77.460 91.222 -11.398 5.546  1.324  H37 YAF 104 
YAF H38 H38 H 0 1 N N N N N N -5.769  71.731 87.406 -10.682 -0.167 -0.515 H38 YAF 105 
YAF H39 H39 H 0 1 N N N N N N -7.921  70.545 87.825 -10.471 -2.209 0.626  H39 YAF 106 
YAF H41 H41 H 0 1 N N N N N N -2.323  78.304 90.014 -8.860  5.419  -3.302 H41 YAF 107 
YAF H42 H42 H 0 1 N N N N N N -1.585  76.848 89.994 -9.697  6.758  -2.730 H42 YAF 108 
YAF H43 H43 H 0 1 N N N N N N -9.143  56.436 81.825 8.428   5.152  1.987  H43 YAF 109 
YAF H44 H44 H 0 1 N N N N N N -8.101  66.534 87.831 -5.844  -5.123 1.709  H44 YAF 110 
YAF H45 H45 H 0 1 N N N N N N -6.522  73.765 86.583 -12.469 -0.000 1.110  H45 YAF 111 
YAF H46 H46 H 0 1 N N N N N N -9.408  71.711 89.236 -11.680 -1.411 2.553  H46 YAF 112 
YAF H47 H47 H 0 1 N N N N N N -8.419  62.275 85.923 3.404   -1.659 1.954  H47 YAF 113 
YAF H48 H48 H 0 1 N N N N N N -5.237  61.542 88.818 1.486   -0.531 -1.914 H48 YAF 114 
YAF H49 H49 H 0 1 N N N N N N -9.003  63.626 88.499 1.170   -2.778 1.929  H49 YAF 115 
YAF H50 H50 H 0 1 N N N N N N -5.781  65.007 92.539 -2.230  -5.325 1.107  H50 YAF 116 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YAF C8  C7  SING N N 1   
YAF C7  C6  DOUB Y N 2   
YAF C7  C2  SING Y N 3   
YAF O1  C9  SING N N 4   
YAF C6  C5  SING Y N 5   
YAF C9  C10 SING N N 6   
YAF C9  N1  SING N N 7   
YAF C10 C11 SING N N 8   
YAF C1  C2  SING N N 9   
YAF C2  C3  DOUB Y N 10  
YAF C5  N1  SING N N 11  
YAF C5  C4  DOUB Y N 12  
YAF N1  C21 SING N N 13  
YAF O3  C22 DOUB N N 14  
YAF C11 C21 SING N N 15  
YAF C11 C12 SING N N 16  
YAF C3  C4  SING Y N 17  
YAF C4  N5  SING N N 18  
YAF C21 C22 SING N N 19  
YAF C21 C24 SING N N 20  
YAF C22 N3  SING N N 21  
YAF C12 C13 DOUB Y N 22  
YAF C12 C20 SING Y N 23  
YAF C13 C14 SING Y N 24  
YAF C19 N2  SING N N 25  
YAF C20 C16 DOUB Y N 26  
YAF N5  C24 SING N N 27  
YAF N5  C25 SING N N 28  
YAF C14 C15 DOUB Y N 29  
YAF C24 N4  DOUB N N 30  
YAF N3  C23 SING N N 31  
YAF C16 C15 SING Y N 32  
YAF C16 C17 SING N N 33  
YAF N2  C17 SING N N 34  
YAF N2  C18 SING N N 35  
YAF O5  C26 SING N N 36  
YAF C25 C26 SING N N 37  
YAF N4  C23 SING N N 38  
YAF C23 O4  DOUB N N 39  
YAF C17 O2  DOUB N N 40  
YAF C26 C27 SING N N 41  
YAF O16 C38 SING N N 42  
YAF C27 O6  SING N N 43  
YAF C27 C28 SING N N 44  
YAF O13 P2  DOUB N N 45  
YAF C38 C39 SING N N 46  
YAF C38 C32 SING N N 47  
YAF O7  C28 SING N N 48  
YAF C33 N7  DOUB Y N 49  
YAF C33 N6  SING Y N 50  
YAF C39 O17 SING N N 51  
YAF C39 C31 SING N N 52  
YAF C28 C29 SING N N 53  
YAF N7  C34 SING Y N 54  
YAF O12 P2  SING N N 55  
YAF P2  O11 SING N N 56  
YAF P2  O14 SING N N 57  
YAF N6  C32 SING N N 58  
YAF N6  C37 SING Y N 59  
YAF C32 O15 SING N N 60  
YAF C34 C37 DOUB Y N 61  
YAF C34 C35 SING Y N 62  
YAF C29 O8  SING N N 63  
YAF C37 N10 SING Y N 64  
YAF N8  C35 SING N N 65  
YAF C30 C31 SING N N 66  
YAF C30 O14 SING N N 67  
YAF C31 O15 SING N N 68  
YAF C35 N9  DOUB Y N 69  
YAF O11 P1  SING N N 70  
YAF O8  P1  SING N N 71  
YAF N10 C36 DOUB Y N 72  
YAF N9  C36 SING Y N 73  
YAF P1  O10 DOUB N N 74  
YAF P1  O9  SING N N 75  
YAF C14 H1  SING N N 76  
YAF C6  H2  SING N N 77  
YAF C11 H3  SING N N 78  
YAF C8  H4  SING N N 79  
YAF C8  H5  SING N N 80  
YAF C8  H6  SING N N 81  
YAF C9  H7  SING N N 82  
YAF C10 H8  SING N N 83  
YAF C10 H9  SING N N 84  
YAF C13 H10 SING N N 85  
YAF C3  H11 SING N N 86  
YAF N3  H12 SING N N 87  
YAF C1  H13 SING N N 88  
YAF C1  H14 SING N N 89  
YAF C1  H15 SING N N 90  
YAF C15 H16 SING N N 91  
YAF C18 H17 SING N N 92  
YAF C18 H18 SING N N 93  
YAF C18 H19 SING N N 94  
YAF C19 H20 SING N N 95  
YAF C19 H21 SING N N 96  
YAF C19 H22 SING N N 97  
YAF C20 H23 SING N N 98  
YAF C25 H25 SING N N 99  
YAF C25 H26 SING N N 100 
YAF C26 H27 SING N N 101 
YAF C27 H28 SING N N 102 
YAF C28 H29 SING N N 103 
YAF C29 H30 SING N N 104 
YAF C29 H31 SING N N 105 
YAF C30 H32 SING N N 106 
YAF C30 H33 SING N N 107 
YAF C31 H34 SING N N 108 
YAF C32 H35 SING N N 109 
YAF C33 H36 SING N N 110 
YAF C36 H37 SING N N 111 
YAF C38 H38 SING N N 112 
YAF C39 H39 SING N N 113 
YAF N8  H41 SING N N 114 
YAF N8  H42 SING N N 115 
YAF O1  H43 SING N N 116 
YAF O12 H44 SING N N 117 
YAF O16 H45 SING N N 118 
YAF O17 H46 SING N N 119 
YAF O5  H47 SING N N 120 
YAF O6  H48 SING N N 121 
YAF O7  H49 SING N N 122 
YAF O9  H50 SING N N 123 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YAF SMILES           ACDLabs              12.01 "CN(C)C(=O)c1cccc(c1)C1CC(O)N2c3cc(C)c(C)cc3N(CC(O)C(O)C(O)COP(=O)(O)OP(=O)(O)OCC3OC(n4cnc5c(N)ncnc54)C(O)C3O)C3=NC(=O)NC(=O)C123"                                                                                                                                                                                                                                                                  
YAF InChI            InChI                1.06  "InChI=1S/C39H48N10O17P2/c1-17-8-22-23(9-18(17)2)49-27(52)11-21(19-6-5-7-20(10-19)34(56)46(3)4)39(49)36(44-38(58)45-37(39)57)47(22)12-24(50)29(53)25(51)13-63-67(59,60)66-68(61,62)64-14-26-30(54)31(55)35(65-26)48-16-43-28-32(40)41-15-42-33(28)48/h5-10,15-16,21,24-27,29-31,35,50-55H,11-14H2,1-4H3,(H,59,60)(H,61,62)(H2,40,41,42)(H,45,57,58)/t21-,24-,25+,26+,27+,29-,30+,31+,35+,39-/m0/s1" 
YAF InChIKey         InChI                1.06  CXEZEWPFZUPPDK-SIXGFUEYSA-N                                                                                                                                                                                                                                                                                                                                                                         
YAF SMILES_CANONICAL CACTVS               3.385 "CN(C)C(=O)c1cccc(c1)[C@@H]2C[C@@H](O)N3c4cc(C)c(C)cc4N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(=O)O[P](O)(=O)OC[C@H]5O[C@H]([C@H](O)[C@@H]5O)n6cnc7c(N)ncnc67)C8=NC(=O)NC(=O)[C@@]238"                                                                                                                                                                                                                   
YAF SMILES           CACTVS               3.385 "CN(C)C(=O)c1cccc(c1)[CH]2C[CH](O)N3c4cc(C)c(C)cc4N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]5O[CH]([CH](O)[CH]5O)n6cnc7c(N)ncnc67)C8=NC(=O)NC(=O)[C]238"                                                                                                                                                                                                                                 
YAF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc2c(cc1C)N3[C@@H](C[C@H]([C@]34C(=O)NC(=O)N=C4N2C[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)OC[C@@H]5[C@H]([C@H]([C@@H](O5)n6cnc7c6ncnc7N)O)O)O)O)O)c8cccc(c8)C(=O)N(C)C)O"                                                                                                                                                                                                                       
YAF SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc2c(cc1C)N3C(CC(C34C(=O)NC(=O)N=C4N2CC(C(C(COP(=O)(O)OP(=O)(O)OCC5C(C(C(O5)n6cnc7c6ncnc7N)O)O)O)O)O)c8cccc(c8)C(=O)N(C)C)O"                                                                                                                                                                                                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           YAF 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           ACDLabs 
_pdbx_chem_comp_identifier.program_version   12.01 
_pdbx_chem_comp_identifier.identifier        "[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(1R,3S,3aS,13R)-3-[3-(dimethylcarbamoyl)phenyl]-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YAF "Create component" 2023-01-20 RCSB 
YAF "Initial release"  2024-08-07 RCSB 
# 
