data_6OG
# 
_chem_comp.id                                    6OG 
_chem_comp.name                                  
;6-O-METHYL GUANOSINE-5'-MONOPHOSPHATE
;
_chem_comp.type                                  "DNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C11 H16 N5 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               DG 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2004-04-30 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         G32 
_chem_comp.formula_weight                        361.248 
_chem_comp.one_letter_code                       G 
_chem_comp.three_letter_code                     6OG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1T38 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6OG P      P      P 0 1 N N N -8.171 14.841 32.234 -5.299 0.927  -0.324 P      6OG 1  
6OG OP1    OP1    O 0 1 N N N -9.585 14.590 32.655 -6.364 -0.022 0.071  OP1    6OG 2  
6OG OP2    OP2    O 0 1 N N N -7.496 13.889 31.297 -5.122 2.043  0.824  OP2    6OG 3  
6OG "O5'"  "O5'"  O 0 1 N N N -7.283 15.014 33.550 -3.914 0.130  -0.515 "O5'"  6OG 4  
6OG N9     N9     N 0 1 Y N N -3.831 14.895 34.842 1.309  -0.007 0.110  N9     6OG 5  
6OG C4     C4     C 0 1 Y N N -2.587 14.532 35.267 2.641  -0.184 -0.168 C4     6OG 6  
6OG N3     N3     N 0 1 Y N N -2.036 14.855 36.453 3.360  -1.150 -0.731 N3     6OG 7  
6OG C2     C2     C 0 1 Y N N -0.833 14.350 36.586 4.670  -1.023 -0.860 C2     6OG 8  
6OG N2     N2     N 0 1 N N N -0.144 14.569 37.714 5.386  -2.051 -1.453 N2     6OG 9  
6OG N1     N1     N 0 1 Y N N -0.220 13.593 35.622 5.323  0.054  -0.442 N1     6OG 10 
6OG C6     C6     C 0 1 Y N N -0.776 13.258 34.392 4.682  1.065  0.131  C6     6OG 11 
6OG O6     O6     O 0 1 N N N -0.076 12.511 33.514 5.357  2.160  0.554  O6     6OG 12 
6OG C5     C5     C 0 1 Y N N -2.055 13.781 34.246 3.290  0.975  0.290  C5     6OG 13 
6OG N7     N7     N 0 1 Y N N -2.948 13.677 33.197 2.338  1.786  0.814  N7     6OG 14 
6OG C8     C8     C 0 1 Y N N -3.988 14.357 33.593 1.176  1.212  0.709  C8     6OG 15 
6OG "C2'"  "C2'"  C 0 1 N N N -5.491 16.782 34.839 0.101  -1.996 0.941  "C2'"  6OG 16 
6OG "C5'"  "C5'"  C 0 1 N N N -7.833 14.690 34.819 -3.343 -0.694 0.504  "C5'"  6OG 17 
6OG "C4'"  "C4'"  C 0 1 N N R -7.090 15.408 35.913 -2.033 -1.300 -0.005 "C4'"  6OG 18 
6OG "O4'"  "O4'"  O 0 1 N N N -5.791 14.816 36.074 -1.044 -0.266 -0.203 "O4'"  6OG 19 
6OG "C1'"  "C1'"  C 0 1 N N R -4.786 15.688 35.604 0.228  -0.949 -0.188 "C1'"  6OG 20 
6OG "C3'"  "C3'"  C 0 1 N N S -6.817 16.853 35.561 -1.421 -2.232 1.065  "C3'"  6OG 21 
6OG "O3'"  "O3'"  O 0 1 N N N -6.689 17.582 36.753 -1.740 -3.596 0.782  "O3'"  6OG 22 
6OG C      C      C 0 1 N N N 1.236  12.058 33.843 6.772  2.168  0.353  C      6OG 23 
6OG HOP2   HOP2   H 0 0 N N N -8.097 13.189 31.069 -4.439 2.700  0.632  HOP2   6OG 24 
6OG HN21   HN21   H 0 0 N N N -0.691 15.129 38.336 4.926  -2.846 -1.764 HN21   6OG 25 
6OG HN22   HN22   H 0 0 N N N 0.067  13.694 38.151 6.348  -1.975 -1.556 HN22   6OG 26 
6OG H8     H8     H 0 1 N N N -4.880 14.483 32.998 0.242  1.637  1.047  H8     6OG 27 
6OG "H2'"  "H2'"  H 0 1 N N N -4.944 17.736 34.880 0.610  -2.919 0.665  "H2'"  6OG 28 
6OG "H2''" "H2''" H 0 0 N N N -5.611 16.533 33.774 0.503  -1.602 1.875  "H2''" 6OG 29 
6OG "H5'"  "H5'"  H 0 1 N N N -8.890 14.993 34.842 -3.144 -0.091 1.390  "H5'"  6OG 30 
6OG "H5''" "H5''" H 0 0 N N N -7.753 13.605 34.981 -4.039 -1.494 0.757  "H5''" 6OG 31 
6OG "H4'"  "H4'"  H 0 1 N N N -7.718 15.337 36.813 -2.204 -1.846 -0.933 "H4'"  6OG 32 
6OG "H1'"  "H1'"  H 0 1 N N N -4.196 16.182 36.390 0.408  -1.442 -1.143 "H1'"  6OG 33 
6OG "H3'"  "H3'"  H 0 1 N N N -7.602 17.334 34.959 -1.771 -1.955 2.059  "H3'"  6OG 34 
6OG "HO3'" "HO3'" H 0 0 N N N -7.529 17.618 37.195 -1.332 -4.229 1.388  "HO3'" 6OG 35 
6OG H1     H1     H 0 1 N N N 1.641  11.469 33.007 7.219  1.326  0.882  H1     6OG 36 
6OG H2     H2     H 0 1 N N N 1.887  12.925 34.030 6.988  2.084  -0.712 H2     6OG 37 
6OG H3     H3     H 0 1 N N N 1.192  11.431 34.746 7.188  3.100  0.736  H3     6OG 38 
6OG OP3    OP3    O 0 1 N Y N -8.366 16.191 31.186 -5.702 1.642  -1.709 OP3    6OG 39 
6OG HOP3   HOP3   H 0 0 N Y N -9.285 16.427 31.141 -6.529 2.142  -1.667 HOP3   6OG 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6OG P     OP1    DOUB N N 1  
6OG P     OP2    SING N N 2  
6OG P     "O5'"  SING N N 3  
6OG OP2   HOP2   SING N N 4  
6OG "O5'" "C5'"  SING N N 5  
6OG N9    C4     SING Y N 6  
6OG N9    C8     SING Y N 7  
6OG N9    "C1'"  SING N N 8  
6OG C4    N3     SING Y N 9  
6OG C4    C5     DOUB Y N 10 
6OG N3    C2     DOUB Y N 11 
6OG C2    N2     SING N N 12 
6OG C2    N1     SING Y N 13 
6OG N2    HN21   SING N N 14 
6OG N2    HN22   SING N N 15 
6OG N1    C6     DOUB Y N 16 
6OG C6    O6     SING N N 17 
6OG C6    C5     SING Y N 18 
6OG O6    C      SING N N 19 
6OG C5    N7     SING Y N 20 
6OG N7    C8     DOUB Y N 21 
6OG C8    H8     SING N N 22 
6OG "C2'" "C1'"  SING N N 23 
6OG "C2'" "C3'"  SING N N 24 
6OG "C2'" "H2'"  SING N N 25 
6OG "C2'" "H2''" SING N N 26 
6OG "C5'" "C4'"  SING N N 27 
6OG "C5'" "H5'"  SING N N 28 
6OG "C5'" "H5''" SING N N 29 
6OG "C4'" "O4'"  SING N N 30 
6OG "C4'" "C3'"  SING N N 31 
6OG "C4'" "H4'"  SING N N 32 
6OG "O4'" "C1'"  SING N N 33 
6OG "C1'" "H1'"  SING N N 34 
6OG "C3'" "O3'"  SING N N 35 
6OG "C3'" "H3'"  SING N N 36 
6OG "O3'" "HO3'" SING N N 37 
6OG C     H1     SING N N 38 
6OG C     H2     SING N N 39 
6OG C     H3     SING N N 40 
6OG P     OP3    SING N N 41 
6OG OP3   HOP3   SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6OG SMILES           ACDLabs              12.01 "O=P(O)(O)OCC3OC(n2cnc1c2nc(nc1OC)N)CC3O"                                                                                                                   
6OG SMILES_CANONICAL CACTVS               3.370 "COc1nc(N)nc2n(cnc12)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3"                                                                                                
6OG SMILES           CACTVS               3.370 "COc1nc(N)nc2n(cnc12)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3"                                                                                                    
6OG SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "COc1c2c(nc(n1)N)n(cn2)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O"                                                                                                
6OG SMILES           "OpenEye OEToolkits" 1.7.0 "COc1c2c(nc(n1)N)n(cn2)C3CC(C(O3)COP(=O)(O)O)O"                                                                                                             
6OG InChI            InChI                1.03  "InChI=1S/C11H16N5O7P/c1-21-10-8-9(14-11(12)15-10)16(4-13-8)7-2-5(17)6(23-7)3-22-24(18,19)20/h4-7,17H,2-3H2,1H3,(H2,12,14,15)(H2,18,19,20)/t5-,6+,7+/m0/s1" 
6OG InChIKey         InChI                1.03  GFRAHVJOXXMIDI-RRKCRQDMSA-N                                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6OG "SYSTEMATIC NAME" ACDLabs              12.01 "9-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-6-methoxy-9H-purin-2-amine"              
6OG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "[(2R,3S,5R)-5-(2-azanyl-6-methoxy-purin-9-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6OG "Create component"     2004-04-30 RCSB 
6OG "Modify aromatic_flag" 2011-06-04 RCSB 
6OG "Modify descriptor"    2011-06-04 RCSB 
# 
