data_AMG
#

_chem_comp.id                                   AMG
_chem_comp.name                                 "methyl alpha-D-galactopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H14 O6"
_chem_comp.mon_nstd_parent_comp_id              GLA
_chem_comp.pdbx_synonyms                        "ALPHA-METHYL-D-GALACTOSIDE; methyl alpha-D-galactoside; methyl D-galactoside; methyl galactoside"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       194.182
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    AMG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1JAC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  AMG  ALPHA-METHYL-D-GALACTOSIDE    PDB  ?  
2  AMG  "methyl alpha-D-galactoside"  PDB  ?  
3  AMG  "methyl D-galactoside"        PDB  ?  
4  AMG  "methyl galactoside"          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AMG  C1   C1   C  0  1  N  N  S  33.992  36.959  92.622   1.208  -0.638  -0.268  C1   AMG   1  
AMG  C2   C2   C  0  1  N  N  R  35.150  35.956  92.669   0.362  -0.549  -1.540  C2   AMG   2  
AMG  C3   C3   C  0  1  N  N  S  36.485  36.631  92.927  -0.616   0.621  -1.409  C3   AMG   3  
AMG  C4   C4   C  0  1  N  N  R  36.755  37.731  91.882  -1.409   0.454  -0.109  C4   AMG   4  
AMG  C5   C5   C  0  1  N  N  R  35.544  38.661  91.748  -0.430   0.290   1.055  C5   AMG   5  
AMG  C6   C6   C  0  1  N  N  N  35.611  39.768  90.698  -1.214   0.154   2.362  C6   AMG   6  
AMG  C7   C7   C  0  1  N  N  N  32.819  38.105  94.656   2.685   0.445   1.113  C7   AMG   7  
AMG  O1   O1   O  0  1  N  N  N  33.974  37.626  93.915   1.914   0.590  -0.080  O1   AMG   8  
AMG  O2   O2   O  0  1  N  N  N  35.076  34.930  93.654   1.213  -0.337  -2.667  O2   AMG   9  
AMG  O3   O3   O  0  1  N  N  N  37.470  35.530  92.820  -1.513   0.627  -2.521  O3   AMG  10  
AMG  O4   O4   O  0  1  N  N  N  37.031  37.017  90.695  -2.242  -0.703  -0.200  O4   AMG  11  
AMG  O5   O5   O  0  1  N  N  N  34.322  37.854  91.509   0.365  -0.877   0.856  O5   AMG  12  
AMG  O6   O6   O  0  1  N  N  N  35.474  39.305  89.400  -0.301   0.008   3.452  O6   AMG  13  
AMG  H1   H1   H  0  1  N  N  N  32.978  36.525  92.454   1.923  -1.455  -0.365  H1   AMG  14  
AMG  H2   H2   H  0  1  N  N  N  35.062  35.495  91.657  -0.195  -1.476  -1.673  H2   AMG  15  
AMG  H3   H3   H  0  1  N  N  N  36.527  37.141  93.917  -0.062   1.560  -1.381  H3   AMG  16  
AMG  H4   H4   H  0  1  N  N  N  37.600  38.403  92.156  -2.028   1.335   0.056  H4   AMG  17  
AMG  H5   H5   H  0  1  N  N  N  35.530  39.205  92.721   0.217   1.165   1.109  H5   AMG  18  
AMG  H61  H61  H  0  1  N  N  N  34.861  40.564  90.914  -1.822   1.046   2.515  H61  AMG  19  
AMG  H62  H62  H  0  1  N  N  N  36.548  40.361  90.808  -1.860  -0.721   2.309  H62  AMG  20  
AMG  H71  H71  H  0  1  N  N  N  32.805  38.616  95.646   3.243   1.363   1.299  H71  AMG  21  
AMG  H72  H72  H  0  1  N  N  N  32.270  38.780  93.958   2.019   0.249   1.954  H72  AMG  22  
AMG  H73  H73  H  0  1  N  N  N  32.139  37.227  94.758   3.380  -0.385   0.999  H73  AMG  23  
AMG  HO2  HO2  H  0  1  N  Y  N  35.793  34.308  93.683   1.812  -1.095  -2.712  HO2  AMG  24  
AMG  HO3  HO3  H  0  1  N  Y  N  38.305  35.952  92.981  -0.973   0.735  -3.316  HO3  AMG  25  
AMG  HO4  HO4  H  0  1  N  Y  N  37.197  37.695  90.050  -2.842  -0.558  -0.944  HO4  AMG  26  
AMG  HO6  HO6  H  0  1  N  Y  N  35.515  39.993  88.746  -0.834  -0.073   4.254  HO6  AMG  27  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AMG  C1  C2   SING  N  N   1  
AMG  C1  O1   SING  N  N   2  
AMG  C1  O5   SING  N  N   3  
AMG  C1  H1   SING  N  N   4  
AMG  C2  C3   SING  N  N   5  
AMG  C2  O2   SING  N  N   6  
AMG  C2  H2   SING  N  N   7  
AMG  C3  C4   SING  N  N   8  
AMG  C3  O3   SING  N  N   9  
AMG  C3  H3   SING  N  N  10  
AMG  C4  C5   SING  N  N  11  
AMG  C4  O4   SING  N  N  12  
AMG  C4  H4   SING  N  N  13  
AMG  C5  C6   SING  N  N  14  
AMG  C5  O5   SING  N  N  15  
AMG  C5  H5   SING  N  N  16  
AMG  C6  O6   SING  N  N  17  
AMG  C6  H61  SING  N  N  18  
AMG  C6  H62  SING  N  N  19  
AMG  C7  O1   SING  N  N  20  
AMG  C7  H71  SING  N  N  21  
AMG  C7  H72  SING  N  N  22  
AMG  C7  H73  SING  N  N  23  
AMG  O2  HO2  SING  N  N  24  
AMG  O3  HO3  SING  N  N  25  
AMG  O4  HO4  SING  N  N  26  
AMG  O6  HO6  SING  N  N  27  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AMG  SMILES            ACDLabs               10.04  "OC1C(O)C(O)C(OC1OC)CO"  
AMG  SMILES_CANONICAL  CACTVS                3.341  "CO[C@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O"  
AMG  SMILES            CACTVS                3.341  "CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O"  
AMG  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CO[C@@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O)O"  
AMG  SMILES            "OpenEye OEToolkits"  1.5.0  "COC1C(C(C(C(O1)CO)O)O)O"  
AMG  InChI             InChI                 1.03   "InChI=1S/C7H14O6/c1-12-7-6(11)5(10)4(9)3(2-8)13-7/h3-11H,2H2,1H3/t3-,4+,5+,6-,7+/m1/s1"  
AMG  InChIKey          InChI                 1.03   HOVAGTYPODGVJG-PZRMXXKTSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AMG  "SYSTEMATIC NAME"                      ACDLabs               10.04  "methyl alpha-D-galactopyranoside"  
AMG  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.5.0  "(2R,3R,4S,5R,6S)-2-(hydroxymethyl)-6-methoxy-oxane-3,4,5-triol"  
AMG  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    DGalp[1Me]a  
AMG  "COMMON NAME"                          GMML                  1.0    1-methyl-a-D-galactopyranose  
AMG  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    a-methyl-galactoside  
#
_pdbx_chem_comp_related.comp_id            AMG
_pdbx_chem_comp_related.related_comp_id    GLA
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  AMG  C1   GLA  C1   "Carbohydrate core"  
 2  AMG  C2   GLA  C2   "Carbohydrate core"  
 3  AMG  C3   GLA  C3   "Carbohydrate core"  
 4  AMG  C4   GLA  C4   "Carbohydrate core"  
 5  AMG  C5   GLA  C5   "Carbohydrate core"  
 6  AMG  C6   GLA  C6   "Carbohydrate core"  
 7  AMG  O1   GLA  O1   "Carbohydrate core"  
 8  AMG  O2   GLA  O2   "Carbohydrate core"  
 9  AMG  O3   GLA  O3   "Carbohydrate core"  
10  AMG  O4   GLA  O4   "Carbohydrate core"  
11  AMG  O5   GLA  O5   "Carbohydrate core"  
12  AMG  O6   GLA  O6   "Carbohydrate core"  
13  AMG  H1   GLA  H1   "Carbohydrate core"  
14  AMG  H2   GLA  H2   "Carbohydrate core"  
15  AMG  H3   GLA  H3   "Carbohydrate core"  
16  AMG  H4   GLA  H4   "Carbohydrate core"  
17  AMG  H5   GLA  H5   "Carbohydrate core"  
18  AMG  H61  GLA  H61  "Carbohydrate core"  
19  AMG  H62  GLA  H62  "Carbohydrate core"  
20  AMG  HO2  GLA  HO2  "Carbohydrate core"  
21  AMG  HO3  GLA  HO3  "Carbohydrate core"  
22  AMG  HO4  GLA  HO4  "Carbohydrate core"  
23  AMG  HO6  GLA  HO6  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
AMG  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
AMG  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
AMG  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
AMG  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AMG  "Create component"          1999-07-08  EBI   
AMG  "Modify descriptor"         2011-06-04  RCSB  
AMG  "Other modification"        2020-07-03  RCSB  
AMG  "Modify parent residue"     2020-07-17  RCSB  
AMG  "Modify name"               2020-07-17  RCSB  
AMG  "Modify synonyms"           2020-07-17  RCSB  
AMG  "Modify linking type"       2020-07-17  RCSB  
AMG  "Modify leaving atom flag"  2020-07-17  RCSB  
##
