data_RTG
#

_chem_comp.id                                   RTG
_chem_comp.name                                 6-O-phosphono-alpha-L-idopyranose
_chem_comp.type                                 "L-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H13 O9 P"
_chem_comp.mon_nstd_parent_comp_id              Z0F
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-02-25
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       260.136
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RTG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4IPN
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RTG  OAH  OAH  O  0  1  N  N  N  28.811  -1.698  15.176  -3.523  -0.970  -1.122  OAH  RTG   1  
RTG  PBA  PBA  P  0  1  N  N  N  28.684  -0.192  15.129  -3.320   0.041  -0.060  PBA  RTG   2  
RTG  OAI  OAI  O  0  1  N  N  N  28.786   0.265  13.687  -4.102   1.393  -0.449  OAI  RTG   3  
RTG  OAJ  OAJ  O  0  1  N  N  N  29.791   0.414  15.958  -3.888  -0.525   1.336  OAJ  RTG   4  
RTG  O6   O6   O  0  1  N  N  N  27.290   0.271  15.707  -1.747   0.354   0.089  O6   RTG   5  
RTG  C6   C6   C  0  1  N  N  N  27.073   0.199  17.063  -0.771  -0.661   0.327  C6   RTG   6  
RTG  C5   C5   C  0  1  N  N  S  27.323  -1.153  17.689   0.617  -0.023   0.415  C5   RTG   7  
RTG  O5   O5   O  0  1  N  N  N  26.120  -1.855  17.817   0.962   0.544  -0.851  O5   RTG   8  
RTG  C4   C4   C  0  1  N  N  S  28.172  -1.006  18.959   1.647  -1.092   0.791  C4   RTG   9  
RTG  O4   O4   O  0  1  N  N  N  28.938   0.194  18.841   1.619  -2.144  -0.176  O4   RTG  10  
RTG  C3   C3   C  0  1  N  N  S  27.490  -1.042  20.200   3.042  -0.458   0.818  C3   RTG  11  
RTG  O3   O3   O  0  1  N  N  N  28.484  -1.487  21.235   3.089   0.550   1.829  O3   RTG  12  
RTG  C2   C2   C  0  1  N  N  R  26.356  -1.898  20.219   3.331   0.172  -0.548  C2   RTG  13  
RTG  O2   O2   O  0  1  N  N  N  25.592  -1.753  21.431   3.347  -0.846  -1.550  O2   RTG  14  
RTG  C1   C1   C  0  1  N  N  R  25.438  -1.663  19.029   2.236   1.192  -0.872  C1   RTG  15  
RTG  O1   O1   O  0  1  N  N  N  23.950  -2.686  19.105   2.255   2.238   0.101  O1   RTG  16  
RTG  H6   H6   H  0  1  N  N  N  28.907  -0.490  13.123  -5.056   1.279  -0.555  H6   RTG  17  
RTG  H7   H7   H  0  1  N  N  N  30.326  -0.279  16.328  -3.788   0.086   2.079  H7   RTG  18  
RTG  H61  H61  H  0  1  N  N  N  27.737   0.927  17.552  -0.996  -1.171   1.264  H61  RTG  19  
RTG  H62  H62  H  0  1  N  N  N  26.025   0.473  17.254  -0.788  -1.381  -0.492  H62  RTG  20  
RTG  H5   H5   H  0  1  N  N  N  27.950  -1.706  16.974   0.610   0.759   1.174  H5   RTG  21  
RTG  H4   H4   H  0  1  N  N  N  28.881  -1.847  18.949   1.411  -1.495   1.775  H4   RTG  22  
RTG  HO4  HO4  H  0  1  N  N  N  29.473   0.306  19.618   2.249  -2.856   0.000  HO4  RTG  23  
RTG  H3   H3   H  0  1  N  N  N  27.169  -0.022  20.459   3.787  -1.225   1.030  H3   RTG  24  
RTG  HO3  HO3  H  0  1  N  N  N  28.062  -1.524  22.085   3.945   0.994   1.903  HO3  RTG  25  
RTG  H2   H2   H  0  1  N  N  N  26.706  -2.939  20.158   4.298   0.674  -0.520  H2   RTG  26  
RTG  HO2  HO2  H  0  1  N  N  N  24.845  -2.339  21.407   3.525  -0.517  -2.442  HO2  RTG  27  
RTG  H1   H1   H  0  1  N  N  N  25.073  -0.627  19.083   2.412   1.613  -1.862  H1   RTG  28  
RTG  HO1  HO1  H  0  1  N  Y  N  23.506  -2.539  19.932   1.585   2.921  -0.042  HO1  RTG  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RTG  OAH  PBA  DOUB  N  N   1  
RTG  PBA  OAI  SING  N  N   2  
RTG  PBA  O6   SING  N  N   3  
RTG  PBA  OAJ  SING  N  N   4  
RTG  O6   C6   SING  N  N   5  
RTG  C6   C5   SING  N  N   6  
RTG  C5   O5   SING  N  N   7  
RTG  C5   C4   SING  N  N   8  
RTG  O5   C1   SING  N  N   9  
RTG  C4   O4   SING  N  N  10  
RTG  C4   C3   SING  N  N  11  
RTG  C3   C2   SING  N  N  12  
RTG  C3   O3   SING  N  N  13  
RTG  C2   C1   SING  N  N  14  
RTG  C2   O2   SING  N  N  15  
RTG  C1   O1   SING  N  N  16  
RTG  OAI  H6   SING  N  N  17  
RTG  OAJ  H7   SING  N  N  18  
RTG  C6   H61  SING  N  N  19  
RTG  C6   H62  SING  N  N  20  
RTG  C5   H5   SING  N  N  21  
RTG  C4   H4   SING  N  N  22  
RTG  O4   HO4  SING  N  N  23  
RTG  C3   H3   SING  N  N  24  
RTG  O3   HO3  SING  N  N  25  
RTG  C2   H2   SING  N  N  26  
RTG  O2   HO2  SING  N  N  27  
RTG  C1   H1   SING  N  N  28  
RTG  O1   HO1  SING  N  N  29  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RTG  SMILES            ACDLabs               12.01  "O=P(O)(OCC1OC(C(C(C1O)O)O)O)O"  
RTG  InChI             InChI                 1.03   "InChI=1S/C6H13O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H2,11,12,13)/t2-,3+,4-,5+,6+/m0/s1"  
RTG  InChIKey          InChI                 1.03   NBSCHQHZLSJFNQ-DSOBHZJASA-N  
RTG  SMILES_CANONICAL  CACTVS                3.385  "O[C@@H]1O[C@@H](CO[P](O)(O)=O)[C@@H](O)[C@H](O)[C@H]1O"  
RTG  SMILES            CACTVS                3.385  "O[CH]1O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH]1O"  
RTG  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C([C@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)OP(=O)(O)O"  
RTG  SMILES            "OpenEye OEToolkits"  2.0.7  "C(C1C(C(C(C(O1)O)O)O)O)OP(=O)(O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RTG  "SYSTEMATIC NAME"  ACDLabs               12.01  6-O-phosphono-alpha-L-idopyranose  
RTG  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[(2~{S},3~{S},4~{S},5~{R},6~{R})-3,4,5,6-tetrakis(oxidanyl)oxan-2-yl]methyl dihydrogen phosphate"  
#
_pdbx_chem_comp_related.comp_id            RTG
_pdbx_chem_comp_related.related_comp_id    Z0F
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  RTG  C1   Z0F  C1   "Carbohydrate core"  
 2  RTG  C2   Z0F  C2   "Carbohydrate core"  
 3  RTG  C3   Z0F  C3   "Carbohydrate core"  
 4  RTG  C4   Z0F  C4   "Carbohydrate core"  
 5  RTG  C5   Z0F  C5   "Carbohydrate core"  
 6  RTG  C6   Z0F  C6   "Carbohydrate core"  
 7  RTG  O1   Z0F  O1   "Carbohydrate core"  
 8  RTG  O2   Z0F  O2   "Carbohydrate core"  
 9  RTG  O3   Z0F  O3   "Carbohydrate core"  
10  RTG  O4   Z0F  O4   "Carbohydrate core"  
11  RTG  O5   Z0F  O5   "Carbohydrate core"  
12  RTG  O6   Z0F  O6   "Carbohydrate core"  
13  RTG  H1   Z0F  H1   "Carbohydrate core"  
14  RTG  H2   Z0F  H2   "Carbohydrate core"  
15  RTG  H3   Z0F  H3   "Carbohydrate core"  
16  RTG  H4   Z0F  H4   "Carbohydrate core"  
17  RTG  H5   Z0F  H5   "Carbohydrate core"  
18  RTG  H61  Z0F  H61  "Carbohydrate core"  
19  RTG  H62  Z0F  H62  "Carbohydrate core"  
20  RTG  HO1  Z0F  HO1  "Carbohydrate core"  
21  RTG  HO2  Z0F  HO2  "Carbohydrate core"  
22  RTG  HO3  Z0F  HO3  "Carbohydrate core"  
23  RTG  HO4  Z0F  HO4  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
RTG  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
RTG  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
RTG  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
RTG  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RTG  "Create component"    2020-02-25  RCSB  
RTG  "Other modification"  2020-04-02  RCSB  
RTG  "Initial release"     2020-07-29  RCSB  
##
