data_APH
#

_chem_comp.id                                   APH
_chem_comp.name                                 P-AMIDINOPHENYL-3-ALANINE
_chem_comp.type                                 "D-PEPTIDE LINKING"
_chem_comp.pdbx_type                            ATOMP
_chem_comp.formula                              "C10 H13 N3 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "D-BETA(4-AMIDINOPHENYL)-ALANINE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       207.229
_chem_comp.one_letter_code                      A
_chem_comp.three_letter_code                    APH
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1QUR
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
APH  N     N     N  0  1  N  N  N  16.128  -14.223  20.589  -2.145   1.402   0.902  N     APH   1  
APH  CA    CA    C  0  1  N  N  R  16.365  -12.833  20.342  -2.411   0.036   0.431  CA    APH   2  
APH  C     C     C  0  1  N  N  N  17.435  -12.828  19.266  -3.887  -0.128   0.175  C     APH   3  
APH  O     O     O  0  1  N  N  N  17.123  -12.931  18.077  -4.584   0.845   0.009  O     APH   4  
APH  CB    CB    C  0  1  N  N  N  15.086  -12.131  19.871  -1.637  -0.216  -0.864  CB    APH   5  
APH  CG    CG    C  0  1  Y  N  N  13.968  -12.119  20.904  -0.158  -0.173  -0.582  CG    APH   6  
APH  CD1   CD1   C  0  1  Y  N  N  13.125  -13.198  21.061   0.511  -1.331  -0.229  CD1   APH   7  
APH  CD2   CD2   C  0  1  Y  N  N  13.818  -11.034  21.769   0.528   1.025  -0.683  CD2   APH   8  
APH  CE1   CE1   C  0  1  Y  N  N  12.139  -13.204  22.088   1.865  -1.298   0.030  CE1   APH   9  
APH  CE2   CE2   C  0  1  Y  N  N  12.840  -11.044  22.790   1.883   1.070  -0.427  CE2   APH  10  
APH  CZ    CZ    C  0  1  Y  N  N  12.001  -12.128  22.954   2.561  -0.093  -0.065  CZ    APH  11  
APH  CF    CF    C  0  1  N  N  N  11.019  -12.127  24.021   4.015  -0.051   0.213  CF    APH  12  
APH  NG1   NG1   N  0  1  N  N  N  10.289  -13.199  24.294   4.647  -1.140   0.546  NG1   APH  13  
APH  NG2   NG2   N  0  1  N  N  N  10.859  -11.010  24.735   4.700   1.141   0.118  NG2   APH  14  
APH  OXT   OXT   O  0  1  N  Y  N  18.712  -12.709  19.693  -4.428  -1.356   0.130  OXT   APH  15  
APH  H     HN1   H  0  1  N  N  N  16.073  -14.712  19.718  -2.432   2.084   0.216  H     APH  16  
APH  H2    HN2   H  0  1  N  Y  N  16.878  -14.597  21.134  -2.593   1.572   1.790  H2    APH  17  
APH  HA    HA    H  0  1  N  N  N  16.680  -12.288  21.244  -2.092  -0.678   1.190  HA    APH  18  
APH  HB2   HB1   H  0  1  N  N  N  15.340  -11.087  19.633  -1.903  -1.196  -1.261  HB2   APH  19  
APH  HB3   HB2   H  0  1  N  N  N  14.713  -12.694  19.002  -1.891   0.553  -1.595  HB3   APH  20  
APH  HD1   HD1   H  0  1  N  N  N  13.213  -14.047  20.399  -0.030  -2.264  -0.155  HD1   APH  21  
APH  HD2   HD2   H  0  1  N  N  N  14.460  -10.173  21.657   0.002   1.925  -0.964  HD2   APH  22  
APH  HE1   HE1   H  0  1  N  N  N  11.488  -14.059  22.195   2.386  -2.203   0.307  HE1   APH  23  
APH  HE2   HE2   H  0  1  N  N  N  12.748  -10.194  23.449   2.418   2.006  -0.506  HE2   APH  24  
APH  HG1   HG1   H  0  1  N  N  N   9.676  -12.998  25.058   5.599  -1.112   0.728  HG1   APH  25  
APH  HG21  HG21  H  0  0  N  N  N  11.484  -10.307  24.397   4.230   1.952  -0.131  HG21  APH  26  
APH  HG22  HG22  H  0  0  N  N  N  10.214  -10.895  25.491   5.653   1.169   0.299  HG22  APH  27  
APH  HXT   HXT   H  0  1  N  Y  N  19.298  -12.719  18.946  -5.379  -1.411  -0.037  HXT   APH  28  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
APH  N    CA    SING  N  N   1  
APH  N    H     SING  N  N   2  
APH  N    H2    SING  N  N   3  
APH  CA   C     SING  N  N   4  
APH  CA   CB    SING  N  N   5  
APH  CA   HA    SING  N  N   6  
APH  C    O     DOUB  N  N   7  
APH  C    OXT   SING  N  N   8  
APH  CB   CG    SING  N  N   9  
APH  CB   HB2   SING  N  N  10  
APH  CB   HB3   SING  N  N  11  
APH  CG   CD1   DOUB  Y  N  12  
APH  CG   CD2   SING  Y  N  13  
APH  CD1  CE1   SING  Y  N  14  
APH  CD1  HD1   SING  N  N  15  
APH  CD2  CE2   DOUB  Y  N  16  
APH  CD2  HD2   SING  N  N  17  
APH  CE1  CZ    DOUB  Y  N  18  
APH  CE1  HE1   SING  N  N  19  
APH  CE2  CZ    SING  Y  N  20  
APH  CE2  HE2   SING  N  N  21  
APH  CZ   CF    SING  N  N  22  
APH  CF   NG1   DOUB  N  N  23  
APH  CF   NG2   SING  N  N  24  
APH  NG1  HG1   SING  N  N  25  
APH  NG2  HG21  SING  N  N  26  
APH  NG2  HG22  SING  N  N  27  
APH  OXT  HXT   SING  N  N  28  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
APH  SMILES            ACDLabs               10.04  "O=C(O)C(N)Cc1ccc(cc1)C(=[N@H])N"  
APH  SMILES_CANONICAL  CACTVS                3.341  "N[C@H](Cc1ccc(cc1)C(N)=N)C(O)=O"  
APH  SMILES            CACTVS                3.341  "N[CH](Cc1ccc(cc1)C(N)=N)C(O)=O"  
APH  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1cc(ccc1C[C@H](C(=O)O)N)C(=N)N"  
APH  SMILES            "OpenEye OEToolkits"  1.5.0  "c1cc(ccc1CC(C(=O)O)N)C(=N)N"  
APH  InChI             InChI                 1.03   "InChI=1S/C10H13N3O2/c11-8(10(14)15)5-6-1-3-7(4-2-6)9(12)13/h1-4,8H,5,11H2,(H3,12,13)(H,14,15)/t8-/m1/s1"  
APH  InChIKey          InChI                 1.03   XPRCPVGCTGELMN-MRVPVSSYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
APH  "SYSTEMATIC NAME"  ACDLabs               10.04  4-carbamimidoyl-D-phenylalanine  
APH  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R)-2-amino-3-(4-carbamimidoylphenyl)propanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
APH  "Create component"   1999-07-08  EBI   
APH  "Modify descriptor"  2011-06-04  RCSB  
APH  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     APH
_pdbx_chem_comp_synonyms.name        "D-BETA(4-AMIDINOPHENYL)-ALANINE"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
