data_ITH
# 
_chem_comp.id                                    ITH 
_chem_comp.name                                  "4-[(2S,3R)-3-[3,5-bis(oxidanylidene)piperazin-1-ium-1-yl]butan-2-yl]piperazin-4-ium-2,6-dione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H20 N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    2 
_chem_comp.pdbx_initial_date                     2022-04-11 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        284.312 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ITH 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ZBG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ITH C1  C1  C 0 1 N N N -14.184 -23.502 -1.103 -1.305 -3.006 -0.393 C1  ITH 1  
ITH C2  C2  C 0 1 N N S -14.116 -24.876 -0.487 -0.683 -1.649 -0.058 C2  ITH 2  
ITH C3  C3  C 0 1 N N R -14.958 -25.114 0.832  0.500  -1.385 -0.992 C3  ITH 3  
ITH C4  C4  C 0 1 N N N -14.941 -26.587 1.219  -0.008 -0.762 -2.294 C4  ITH 4  
ITH N1  N1  N 1 1 N N N -14.677 -24.240 2.007  1.441  -0.464 -0.342 N1  ITH 5  
ITH C5  C5  C 0 1 N N N -13.415 -24.455 2.757  2.509  -0.106 -1.286 C5  ITH 6  
ITH C6  C6  C 0 1 N N N -13.553 -24.923 4.179  3.497  0.802  -0.603 C6  ITH 7  
ITH O1  O1  O 0 1 N N N -12.575 -25.318 4.790  4.111  1.621  -1.252 O1  ITH 8  
ITH N2  N2  N 0 1 N N N -14.801 -24.920 4.765  3.704  0.712  0.724  N2  ITH 9  
ITH C7  C7  C 0 1 N N N -15.976 -24.631 4.121  3.034  -0.186 1.469  C7  ITH 10 
ITH O2  O2  O 0 1 N N N -17.066 -24.965 4.561  3.236  -0.245 2.664  O2  ITH 11 
ITH C8  C8  C 0 1 N N N -15.833 -23.846 2.859  2.036  -1.117 0.833  C8  ITH 12 
ITH N3  N3  N 1 1 N N N -14.490 -25.787 -1.600 -1.689 -0.592 -0.231 N3  ITH 13 
ITH C9  C9  C 0 1 N N N -13.443 -26.689 -2.121 -1.111 0.704  0.148  C9  ITH 14 
ITH C10 C10 C 0 1 N N N -12.600 -26.105 -3.205 -2.159 1.778  0.013  C10 ITH 15 
ITH O3  O3  O 0 1 N N N -11.505 -26.563 -3.449 -1.826 2.912  -0.256 O3  ITH 16 
ITH N4  N4  N 0 1 N N N -13.130 -25.072 -3.933 -3.461 1.487  0.186  N4  ITH 17 
ITH C11 C11 C 0 1 N N N -14.316 -24.447 -3.636 -3.858 0.236  0.480  C11 ITH 18 
ITH O4  O4  O 0 1 N N N -14.614 -23.360 -4.087 -5.038 -0.001 0.628  O4  ITH 19 
ITH C12 C12 C 0 1 N N N -15.227 -25.176 -2.709 -2.850 -0.873 0.626  C12 ITH 20 
ITH H1  H1  H 0 1 N N N -13.920 -22.747 -0.347 -0.536 -3.777 -0.356 H1  ITH 21 
ITH H2  H2  H 0 1 N N N -13.477 -23.442 -1.944 -2.086 -3.237 0.333  H2  ITH 22 
ITH H3  H3  H 0 1 N N N -15.205 -23.314 -1.468 -1.738 -2.970 -1.393 H3  ITH 23 
ITH H4  H4  H 0 1 N N N -13.065 -25.073 -0.230 -0.336 -1.653 0.976  H4  ITH 24 
ITH H5  H5  H 0 1 N N N -15.998 -24.900 0.544  1.005  -2.326 -1.212 H5  ITH 25 
ITH H7  H6  H 0 1 N N N -15.530 -26.732 2.136  0.840  -0.508 -2.930 H7  ITH 26 
ITH H8  H7  H 0 1 N N N -15.377 -27.185 0.405  -0.650 -1.475 -2.812 H8  ITH 27 
ITH H6  H8  H 0 1 N N N -13.904 -26.908 1.395  -0.576 0.140  -2.067 H6  ITH 28 
ITH H19 H9  H 0 1 N Y N -14.478 -23.373 1.551  0.952  0.370  -0.054 H19 ITH 29 
ITH H10 H10 H 0 1 N N N -12.827 -25.208 2.213  3.018  -1.011 -1.620 H10 ITH 30 
ITH H9  H11 H 0 1 N N N -12.867 -23.501 2.770  2.078  0.407  -2.146 H9  ITH 31 
ITH H11 H12 H 0 1 N N N -14.853 -25.147 5.738  4.345  1.303  1.149  H11 ITH 32 
ITH H12 H13 H 0 1 N N N -15.715 -22.786 3.127  1.252  -1.356 1.551  H12 ITH 33 
ITH H13 H14 H 0 1 N N N -16.753 -23.975 2.269  2.539  -2.033 0.524  H13 ITH 34 
ITH H20 H15 H 0 1 N Y N -15.154 -26.408 -1.184 -1.982 -0.561 -1.196 H20 ITH 35 
ITH H14 H16 H 0 1 N N N -13.933 -27.591 -2.516 -0.767 0.660  1.182  H14 ITH 36 
ITH H15 H17 H 0 1 N N N -12.783 -26.967 -1.286 -0.269 0.933  -0.505 H15 ITH 37 
ITH H16 H18 H 0 1 N N N -12.620 -24.753 -4.732 -4.123 2.191  0.098  H16 ITH 38 
ITH H18 H19 H 0 1 N N N -15.963 -24.468 -2.301 -3.303 -1.819 0.329  H18 ITH 39 
ITH H17 H20 H 0 1 N N N -15.749 -25.966 -3.269 -2.526 -0.936 1.665  H17 ITH 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ITH O4  C11 DOUB N N 1  
ITH N4  C11 SING N N 2  
ITH N4  C10 SING N N 3  
ITH C11 C12 SING N N 4  
ITH O3  C10 DOUB N N 5  
ITH C10 C9  SING N N 6  
ITH C12 N3  SING N N 7  
ITH C9  N3  SING N N 8  
ITH N3  C2  SING N N 9  
ITH C1  C2  SING N N 10 
ITH C2  C3  SING N N 11 
ITH C3  C4  SING N N 12 
ITH C3  N1  SING N N 13 
ITH N1  C5  SING N N 14 
ITH N1  C8  SING N N 15 
ITH C5  C6  SING N N 16 
ITH C8  C7  SING N N 17 
ITH C7  O2  DOUB N N 18 
ITH C7  N2  SING N N 19 
ITH C6  N2  SING N N 20 
ITH C6  O1  DOUB N N 21 
ITH C1  H1  SING N N 22 
ITH C1  H2  SING N N 23 
ITH C1  H3  SING N N 24 
ITH C2  H4  SING N N 25 
ITH C3  H5  SING N N 26 
ITH C4  H7  SING N N 27 
ITH C4  H8  SING N N 28 
ITH C4  H6  SING N N 29 
ITH N1  H19 SING N N 30 
ITH C5  H10 SING N N 31 
ITH C5  H9  SING N N 32 
ITH N2  H11 SING N N 33 
ITH C8  H12 SING N N 34 
ITH C8  H13 SING N N 35 
ITH N3  H20 SING N N 36 
ITH C9  H14 SING N N 37 
ITH C9  H15 SING N N 38 
ITH N4  H16 SING N N 39 
ITH C12 H18 SING N N 40 
ITH C12 H17 SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ITH InChI            InChI                1.06  "InChI=1S/C12H18N4O4/c1-7(15-3-9(17)13-10(18)4-15)8(2)16-5-11(19)14-12(20)6-16/h7-8H,3-6H2,1-2H3,(H,13,17,18)(H,14,19,20)/p+2/t7-,8+" 
ITH InChIKey         InChI                1.06  OBYGAPWKTPDTAS-OCAPTIKFSA-P                                                                                                           
ITH SMILES_CANONICAL CACTVS               3.385 "C[C@@H]([C@@H](C)[NH+]1CC(=O)NC(=O)C1)[NH+]2CC(=O)NC(=O)C2"                                                                          
ITH SMILES           CACTVS               3.385 "C[CH]([CH](C)[NH+]1CC(=O)NC(=O)C1)[NH+]2CC(=O)NC(=O)C2"                                                                              
ITH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]([C@H](C)[NH+]1CC(=O)NC(=O)C1)[NH+]2CC(=O)NC(=O)C2"                                                                            
ITH SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C(C)[NH+]1CC(=O)NC(=O)C1)[NH+]2CC(=O)NC(=O)C2"                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           ITH 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "4-[(2~{S},3~{R})-3-[3,5-bis(oxidanylidene)piperazin-1-ium-1-yl]butan-2-yl]piperazin-4-ium-2,6-dione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ITH "Create component"  2022-04-11 PDBE 
ITH "Initial release"   2022-05-25 RCSB 
ITH "Modify descriptor" 2022-08-22 RCSB 
# 
