data_MTH
#

_chem_comp.id                                   MTH
_chem_comp.name                                 "2-(4-AMINO-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-METHYLSULFANYLMETHYL-TETRAHYDRO-FURAN-3,4-DIOL"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C12 H16 N4 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "5'-DEOXY-5'-(METHYLTHIO)-TUBERCIDIN"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2002-12-12
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       296.345
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    MTH
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1NC1
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MTH  CS      CS    C  0  1  N  N  N  56.122  68.580  22.581   5.642  -2.155   0.339  CS      MTH   1  
MTH  "S5'"   S5*   S  0  1  N  N  N  55.506  70.222  23.127   4.348  -1.439  -0.712  "S5'"   MTH   2  
MTH  "C5'"   C5*   C  0  1  N  N  N  56.164  71.262  21.783   3.716  -0.151   0.399  "C5'"   MTH   3  
MTH  "C4'"   C4*   C  0  1  N  N  S  57.624  71.662  21.993   2.583   0.608  -0.294  "C4'"   MTH   4  
MTH  "O4'"   O4*   O  0  1  N  N  N  58.186  72.179  20.746   1.455  -0.263  -0.483  "O4'"   MTH   5  
MTH  "C2'"   C2*   C  0  1  N  N  R  57.637  74.050  22.074   0.612   1.493   0.834  "C2'"   MTH   6  
MTH  "O2'"   O2*   O  0  1  N  N  N  58.456  75.195  22.479  -0.153   2.699   0.760  "O2'"   MTH   7  
MTH  "C3'"   C3*   C  0  1  N  N  S  57.849  72.763  23.005   2.117   1.779   0.594  "C3'"   MTH   8  
MTH  "O3'"   O3*   O  0  1  N  N  N  59.247  72.659  23.481   2.289   3.026  -0.082  "O3'"   MTH   9  
MTH  "C1'"   C1*   C  0  1  N  N  R  57.932  73.616  20.586   0.268   0.548  -0.345  "C1'"   MTH  10  
MTH  N9      N9    N  0  1  Y  N  N  56.756  73.755  19.522  -0.892  -0.287  -0.021  N9      MTH  11  
MTH  C8      C8    C  0  1  Y  N  N  56.885  73.457  18.167  -0.831  -1.521   0.572  C8      MTH  12  
MTH  C7      C7    C  0  1  Y  N  N  55.774  73.630  17.472  -2.071  -2.013   0.728  C7      MTH  13  
MTH  C5      C5    C  0  1  Y  N  N  54.854  74.065  18.410  -2.992  -1.013   0.193  C5      MTH  14  
MTH  C6      C6    C  0  1  Y  N  N  53.472  74.426  18.349  -4.386  -0.915   0.058  C6      MTH  15  
MTH  N6      N6    N  0  1  N  N  N  52.767  74.389  17.212  -5.213  -1.935   0.493  N6      MTH  16  
MTH  N1      N1    N  0  1  Y  N  N  52.865  74.821  19.529  -4.891   0.182  -0.497  N1      MTH  17  
MTH  C2      C2    C  0  1  Y  N  N  53.565  74.859  20.674  -4.104   1.159  -0.913  C2      MTH  18  
MTH  N3      N3    N  0  1  Y  N  N  54.866  74.541  20.843  -2.794   1.110  -0.807  N3      MTH  19  
MTH  C4      C4    C  0  1  Y  N  N  55.444  74.153  19.671  -2.194   0.055  -0.259  C4      MTH  20  
MTH  HCS1    1HCS  H  0  0  N  N  N  57.220  68.506  22.400   6.374  -1.386   0.589  HCS1    MTH  21  
MTH  HCS2    2HCS  H  0  0  N  N  N  55.719  67.944  23.403   5.194  -2.540   1.255  HCS2    MTH  22  
MTH  HCS3    3HCS  H  0  0  N  N  N  55.843  68.274  21.546   6.135  -2.967  -0.194  HCS3    MTH  23  
MTH  "H5'1"  1H5*  H  0  0  N  N  N  55.524  72.162  21.628   3.340  -0.612   1.312  "H5'1"  MTH  24  
MTH  "H5'2"  2H5*  H  0  0  N  N  N  56.026  70.766  20.794   4.520   0.542   0.646  "H5'2"  MTH  25  
MTH  "H4'1"  1H4*  H  0  0  N  N  N  58.106  70.726  22.360   2.925   0.986  -1.257  "H4'1"  MTH  26  
MTH  "H2'1"  1H2*  H  0  0  N  N  N  56.585  74.405  22.177   0.456   0.995   1.791  "H2'1"  MTH  27  
MTH  HO21    1HO2  H  0  0  N  N  N  58.330  75.958  21.927   0.106   3.241   1.518  HO21    MTH  28  
MTH  "H3'1"  1H3*  H  0  0  N  N  N  57.201  72.758  23.912   2.661   1.780   1.539  "H3'1"  MTH  29  
MTH  HO31    1HO3  H  0  0  N  N  N  59.388  73.351  24.117   1.926   3.710   0.498  HO31    MTH  30  
MTH  "H1'1"  1H1*  H  0  0  N  N  N  58.734  74.273  20.177   0.086   1.119  -1.255  "H1'1"  MTH  31  
MTH  HC81    1HC8  H  0  0  N  N  N  57.808  73.106  17.676   0.078  -2.024   0.869  HC81    MTH  32  
MTH  HC71    1HC7  H  0  0  N  N  N  55.648  73.456  16.390  -2.336  -2.965   1.165  HC71    MTH  33  
MTH  HN61    1HN6  H  0  0  N  N  N  52.857  73.450  16.825  -4.831  -2.730   0.896  HN61    MTH  34  
MTH  HN62    2HN6  H  0  0  N  N  N  51.781  74.647  17.169  -6.174  -1.855   0.394  HN62    MTH  35  
MTH  HC21    1HC2  H  0  0  N  N  N  53.013  75.186  21.571  -4.556   2.033  -1.359  HC21    MTH  36  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MTH  CS     "S5'"   SING  N  N   1  
MTH  CS     HCS1    SING  N  N   2  
MTH  CS     HCS2    SING  N  N   3  
MTH  CS     HCS3    SING  N  N   4  
MTH  "S5'"  "C5'"   SING  N  N   5  
MTH  "C5'"  "C4'"   SING  N  N   6  
MTH  "C5'"  "H5'1"  SING  N  N   7  
MTH  "C5'"  "H5'2"  SING  N  N   8  
MTH  "C4'"  "O4'"   SING  N  N   9  
MTH  "C4'"  "C3'"   SING  N  N  10  
MTH  "C4'"  "H4'1"  SING  N  N  11  
MTH  "O4'"  "C1'"   SING  N  N  12  
MTH  "C2'"  "O2'"   SING  N  N  13  
MTH  "C2'"  "C3'"   SING  N  N  14  
MTH  "C2'"  "C1'"   SING  N  N  15  
MTH  "C2'"  "H2'1"  SING  N  N  16  
MTH  "O2'"  HO21    SING  N  N  17  
MTH  "C3'"  "O3'"   SING  N  N  18  
MTH  "C3'"  "H3'1"  SING  N  N  19  
MTH  "O3'"  HO31    SING  N  N  20  
MTH  "C1'"  N9      SING  N  N  21  
MTH  "C1'"  "H1'1"  SING  N  N  22  
MTH  N9     C8      SING  Y  N  23  
MTH  N9     C4      SING  Y  N  24  
MTH  C8     C7      DOUB  Y  N  25  
MTH  C8     HC81    SING  N  N  26  
MTH  C7     C5      SING  Y  N  27  
MTH  C7     HC71    SING  N  N  28  
MTH  C5     C6      DOUB  Y  N  29  
MTH  C5     C4      SING  Y  N  30  
MTH  C6     N6      SING  N  N  31  
MTH  C6     N1      SING  Y  N  32  
MTH  N6     HN61    SING  N  N  33  
MTH  N6     HN62    SING  N  N  34  
MTH  N1     C2      DOUB  Y  N  35  
MTH  C2     N3      SING  Y  N  36  
MTH  C2     HC21    SING  N  N  37  
MTH  N3     C4      DOUB  Y  N  38  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MTH  SMILES            ACDLabs               10.04  "S(C)CC3OC(n2ccc1c(ncnc12)N)C(O)C3O"  
MTH  SMILES_CANONICAL  CACTVS                3.341  "CSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2ccc3c(N)ncnc23"  
MTH  SMILES            CACTVS                3.341  "CSC[CH]1O[CH]([CH](O)[CH]1O)n2ccc3c(N)ncnc23"  
MTH  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CSC[C@@H]1[C@H]([C@H]([C@@H](O1)n2ccc3c2ncnc3N)O)O"  
MTH  SMILES            "OpenEye OEToolkits"  1.5.0  "CSCC1C(C(C(O1)n2ccc3c2ncnc3N)O)O"  
MTH  InChI             InChI                 1.03   "InChI=1S/C12H16N4O3S/c1-20-4-7-8(17)9(18)12(19-7)16-3-2-6-10(13)14-5-15-11(6)16/h2-3,5,7-9,12,17-18H,4H2,1H3,(H2,13,14,15)/t7-,8-,9-,12-/m1/s1"  
MTH  InChIKey          InChI                 1.03   WBPLMFVTQMIPLW-MFYTUXHUSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MTH  "SYSTEMATIC NAME"  ACDLabs               10.04  "7-(5-S-methyl-5-thio-beta-D-ribofuranosyl)-7H-pyrrolo[2,3-d]pyrimidin-4-amine"  
MTH  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R,3R,4S,5S)-2-(4-aminopyrrolo[2,3-d]pyrimidin-7-yl)-5-(methylsulfanylmethyl)oxolane-3,4-diol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MTH  "Create component"   2002-12-12  RCSB  
MTH  "Modify descriptor"  2011-06-04  RCSB  
MTH  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     MTH
_pdbx_chem_comp_synonyms.name        "5'-DEOXY-5'-(METHYLTHIO)-TUBERCIDIN"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
