data_SSH
# 
_chem_comp.id                                    SSH 
_chem_comp.name                                  "3-DEOXY-D-ARABINO-HEXONIC ACID" 
_chem_comp.type                                  D-saccharide 
_chem_comp.pdbx_type                             ATOMS 
_chem_comp.formula                               "C6 H12 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         D-2-KETO-3-DEOXYGLUCONATE 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2004-07-17 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        180.156 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SSH 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1W3N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SSH O2   O2   O 0 1 N N N N N N -14.098 62.103 12.584 -3.214 0.701  -1.413 O2   SSH 1  
SSH C1   C1   C 0 1 N N N N N N -14.338 62.750 13.663 -2.948 0.005  -0.296 C1   SSH 2  
SSH O1   O1   O 0 1 N N N N N N -14.653 63.975 13.704 -3.716 -0.848 0.081  O1   SSH 3  
SSH C2   C2   C 0 1 N N S N N N -14.230 62.118 15.008 -1.691 0.287  0.486  C2   SSH 4  
SSH C3   C3   C 0 1 N N N N N N -13.610 60.720 15.079 -0.470 -0.078 -0.361 C3   SSH 5  
SSH C4   C4   C 0 1 N N S N N N -12.044 60.932 15.200 0.805  0.324  0.383  C4   SSH 6  
SSH O4   O4   O 0 1 N N N N N N -11.805 62.352 15.230 0.850  1.746  0.518  O4   SSH 7  
SSH C5   C5   C 0 1 N N R N N N -11.308 60.334 13.984 2.027  -0.152 -0.405 C5   SSH 8  
SSH O5   O5   O 0 1 N N N N N N -11.812 58.995 13.840 1.982  -1.574 -0.540 O5   SSH 9  
SSH C6   C6   C 0 1 N N N N N N -9.785  60.152 14.164 3.302  0.249  0.339  C6   SSH 10 
SSH O6   O6   O 0 1 N N N N N N -9.289  59.854 12.848 4.442  -0.091 -0.452 O6   SSH 11 
SSH OT   OT   O 0 1 N Y N N N N -15.235 62.102 15.491 -1.690 -0.493 1.684  OT   SSH 12 
SSH H2   H2   H 0 1 N N N N N N -14.194 62.684 11.838 -4.020 0.520  -1.915 H2   SSH 13 
SSH H2C1 1H2C H 0 0 N N N N N N -13.510 62.755 15.543 -1.652 1.346  0.742  H2C1 SSH 14 
SSH H3C1 1H3C H 0 0 N N N N N N -13.863 60.127 14.188 -0.517 0.451  -1.313 H3C1 SSH 15 
SSH H3C2 2H3C H 0 0 N N N N N N -13.994 60.172 15.952 -0.462 -1.153 -0.542 H3C2 SSH 16 
SSH H4   H4   H 0 1 N N N N N N -11.673 60.433 16.107 0.809  -0.135 1.372  H4   SSH 17 
SSH HA   HA   H 0 1 N N N N N N -11.752 62.646 16.132 0.845  2.112  -0.377 HA   SSH 18 
SSH H5   H5   H 0 1 N N N N N N -11.473 61.024 13.144 2.023  0.307  -1.394 H5   SSH 19 
SSH HB   HB   H 0 1 N N N N N N -11.923 58.795 12.918 1.987  -1.940 0.355  HB   SSH 20 
SSH H6C1 1H6C H 0 0 N N N N N N -9.548  59.355 14.884 3.349  -0.279 1.291  H6C1 SSH 21 
SSH H6C2 2H6C H 0 0 N N N N N N -9.323  61.068 14.562 3.294  1.324  0.520  H6C2 SSH 22 
SSH H6   H6   H 0 1 N N N N N N -10.018 59.788 12.242 5.222  0.178  0.052  H6   SSH 23 
SSH HT   HT   H 0 1 N N N N N N -15.133 62.097 16.435 -1.725 -1.421 1.413  HT   SSH 24 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SSH O2 C1   SING N N 1  
SSH O2 H2   SING N N 2  
SSH C1 O1   DOUB N N 3  
SSH C1 C2   SING N N 4  
SSH C2 C3   SING N N 5  
SSH C2 OT   SING N N 6  
SSH C2 H2C1 SING N N 7  
SSH C3 C4   SING N N 8  
SSH C3 H3C1 SING N N 9  
SSH C3 H3C2 SING N N 10 
SSH C4 O4   SING N N 11 
SSH C4 C5   SING N N 12 
SSH C4 H4   SING N N 13 
SSH O4 HA   SING N N 14 
SSH C5 O5   SING N N 15 
SSH C5 C6   SING N N 16 
SSH C5 H5   SING N N 17 
SSH O5 HB   SING N N 18 
SSH C6 O6   SING N N 19 
SSH C6 H6C1 SING N N 20 
SSH C6 H6C2 SING N N 21 
SSH O6 H6   SING N N 22 
SSH OT HT   SING N N 23 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SSH SMILES           ACDLabs              10.04 "O=C(O)C(O)CC(O)C(O)CO"                                                                   
SSH SMILES_CANONICAL CACTVS               3.341 "OC[C@@H](O)[C@@H](O)C[C@H](O)C(O)=O"                                                     
SSH SMILES           CACTVS               3.341 "OC[CH](O)[CH](O)C[CH](O)C(O)=O"                                                          
SSH SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]([C@@H](CO)O)O)[C@@H](C(=O)O)O"                                                  
SSH SMILES           "OpenEye OEToolkits" 1.5.0 "C(C(C(CO)O)O)C(C(=O)O)O"                                                                 
SSH InChI            InChI                1.03  "InChI=1S/C6H12O6/c7-2-5(10)3(8)1-4(9)6(11)12/h3-5,7-10H,1-2H2,(H,11,12)/t3-,4-,5+/m0/s1" 
SSH InChIKey         InChI                1.03  YGMNHEPVTNXLLS-VAYJURFESA-N                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SSH "SYSTEMATIC NAME" ACDLabs              10.04 "3-deoxy-D-arabino-hexonic acid"               
SSH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,4S,5R)-2,4,5,6-tetrahydroxyhexanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SSH "Create component"    2004-07-17 EBI  
SSH "Modify descriptor"   2011-06-04 RCSB 
SSH "Modify linking type" 2020-06-24 RCSB 
SSH "Modify synonyms"     2021-03-01 PDBE 
SSH "Modify PCM"          2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      SSH 
_pdbx_chem_comp_synonyms.name         D-2-KETO-3-DEOXYGLUCONATE 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            SSH 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Carbohydrate 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C2 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
