data_4CI
# 
_chem_comp.id                                    4CI 
_chem_comp.name                                  "N-[3',6'-bis(oxidanyl)-3-oxidanylidene-spiro[2-benzofuran-1,9'-xanthene]-5-yl]methanethioamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H13 N O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-07-27 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        391.397 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     4CI 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7F7O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
4CI O29 O1  O 0 1 N N N N N N -21.727 -25.075 27.345 1.719  0.596  3.068  O29 4CI 1  
4CI C27 C1  C 0 1 N N N N N N -21.625 -24.013 26.756 1.092  0.446  2.038  C27 4CI 2  
4CI C26 C2  C 0 1 Y N N N N N -20.459 -23.104 26.745 1.652  0.562  0.692  C26 4CI 3  
4CI C25 C3  C 0 1 Y N N N N N -19.155 -23.322 27.170 2.948  0.852  0.261  C25 4CI 4  
4CI C12 C4  C 0 1 Y N N N N N -18.225 -22.280 27.037 3.158  0.889  -1.117 C12 4CI 5  
4CI N13 N1  N 0 1 N N N N N N -16.950 -22.541 27.431 4.438  1.175  -1.603 N13 4CI 6  
4CI C14 C5  C 0 1 N N N N N N -15.772 -21.742 27.131 5.518  0.609  -1.029 C14 4CI 7  
4CI S24 S1  S 0 1 N N N N N N -14.469 -22.231 28.257 5.332  -0.487 0.120  S24 4CI 8  
4CI C11 C6  C 0 1 Y N N N N N -18.639 -21.062 26.457 2.131  0.649  -2.017 C11 4CI 9  
4CI C10 C7  C 0 1 Y N N N N N -19.965 -20.883 26.037 0.838  0.359  -1.594 C10 4CI 10 
4CI C9  C8  C 0 1 Y N N N N N -20.880 -21.920 26.201 0.619  0.321  -0.235 C9  4CI 11 
4CI O28 O2  O 0 1 N N N N N N -22.647 -23.370 25.943 -0.219 0.144  1.969  O28 4CI 12 
4CI C8  C9  C 0 1 N N S N N N -22.342 -21.970 25.799 -0.614 0.047  0.568  C8  4CI 13 
4CI C7  C10 C 0 1 Y N N N N N -23.327 -21.300 26.737 -1.677 1.072  0.277  C7  4CI 14 
4CI C4  C11 C 0 1 Y N N N N N -23.211 -21.420 28.133 -1.544 2.350  0.792  C4  4CI 15 
4CI C3  C12 C 0 1 Y N N N N N -24.143 -20.819 28.983 -2.507 3.307  0.539  C3  4CI 16 
4CI C30 C13 C 0 1 Y N N N N N -22.500 -21.510 24.356 -1.120 -1.342 0.286  C30 4CI 17 
4CI C37 C14 C 0 1 Y N N N N N -21.532 -21.805 23.377 -0.441 -2.428 0.809  C37 4CI 18 
4CI C36 C15 C 0 1 Y N N N N N -21.685 -21.372 22.059 -0.886 -3.712 0.565  C36 4CI 19 
4CI C34 C16 C 0 1 Y N N N N N -22.808 -20.636 21.692 -2.020 -3.917 -0.209 C34 4CI 20 
4CI O35 O3  O 0 1 N N N N N N -22.957 -20.215 20.405 -2.461 -5.180 -0.449 O35 4CI 21 
4CI C33 C17 C 0 1 Y N N N N N -23.774 -20.335 22.649 -2.701 -2.832 -0.735 C33 4CI 22 
4CI C31 C18 C 0 1 Y N N N N N -23.621 -20.767 23.969 -2.252 -1.540 -0.489 C31 4CI 23 
4CI O32 O4  O 0 1 N N N N N N -24.601 -20.447 24.871 -2.930 -0.493 -1.017 O32 4CI 24 
4CI C6  C19 C 0 1 Y N N N N N -24.419 -20.590 26.222 -2.779 0.749  -0.498 C6  4CI 25 
4CI C5  C20 C 0 1 Y N N N N N -25.349 -19.991 27.072 -3.749 1.711  -0.753 C5  4CI 26 
4CI C2  C21 C 0 1 Y N N N N N -25.215 -20.103 28.452 -3.614 2.988  -0.234 C2  4CI 27 
4CI O1  O5  O 0 1 N N N N N N -26.130 -19.516 29.271 -4.564 3.928  -0.484 O1  4CI 28 
4CI H1  H1  H 0 1 N N N N N N -18.863 -24.272 27.593 3.749  1.039  0.961  H1  4CI 29 
4CI H2  H2  H 0 1 N N N N N N -16.808 -23.364 27.982 4.548  1.780  -2.353 H2  4CI 30 
4CI H3  H3  H 0 1 N N N N N N -15.697 -20.986 26.363 6.510  0.896  -1.346 H3  4CI 31 
4CI H6  H6  H 0 1 N N N N N N -17.927 -20.259 26.335 2.341  0.688  -3.076 H6  4CI 32 
4CI H7  H7  H 0 1 N N N N N N -20.274 -19.949 25.590 0.042  0.174  -2.299 H7  4CI 33 
4CI H8  H8  H 0 1 N N N N N N -22.391 -21.984 28.554 -0.683 2.600  1.394  H8  4CI 34 
4CI H9  H9  H 0 1 N N N N N N -24.033 -20.909 30.054 -2.399 4.302  0.943  H9  4CI 35 
4CI H10 H10 H 0 1 N N N N N N -20.657 -22.376 23.650 0.442  -2.271 1.412  H10 4CI 36 
4CI H11 H11 H 0 1 N N N N N N -20.931 -21.608 21.323 -0.352 -4.557 0.976  H11 4CI 37 
4CI H12 H12 H 0 1 N N N N N N -23.770 -19.730 20.322 -3.091 -5.508 0.207  H12 4CI 38 
4CI H13 H13 H 0 1 N N N N N N -24.647 -19.764 22.369 -3.584 -2.990 -1.337 H13 4CI 39 
4CI H14 H14 H 0 1 N N N N N N -26.178 -19.437 26.656 -4.610 1.462  -1.356 H14 4CI 40 
4CI H15 H15 H 0 1 N N N N N N -25.898 -19.684 30.177 -5.276 3.951  0.171  H15 4CI 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
4CI O35 C34 SING N N 1  
4CI C34 C36 DOUB Y N 2  
4CI C34 C33 SING Y N 3  
4CI C36 C37 SING Y N 4  
4CI C33 C31 DOUB Y N 5  
4CI C37 C30 DOUB Y N 6  
4CI C31 C30 SING Y N 7  
4CI C31 O32 SING N N 8  
4CI C30 C8  SING N N 9  
4CI O32 C6  SING N N 10 
4CI C8  O28 SING N N 11 
4CI C8  C9  SING N N 12 
4CI C8  C7  SING N N 13 
4CI O28 C27 SING N N 14 
4CI C10 C9  DOUB Y N 15 
4CI C10 C11 SING Y N 16 
4CI C9  C26 SING Y N 17 
4CI C6  C7  DOUB Y N 18 
4CI C6  C5  SING Y N 19 
4CI C11 C12 DOUB Y N 20 
4CI C7  C4  SING Y N 21 
4CI C26 C27 SING N N 22 
4CI C26 C25 DOUB Y N 23 
4CI C27 O29 DOUB N N 24 
4CI C12 C25 SING Y N 25 
4CI C12 N13 SING N N 26 
4CI C5  C2  DOUB Y N 27 
4CI C14 N13 SING N N 28 
4CI C14 S24 DOUB N N 29 
4CI C4  C3  DOUB Y N 30 
4CI C2  C3  SING Y N 31 
4CI C2  O1  SING N N 32 
4CI C25 H1  SING N N 33 
4CI N13 H2  SING N N 34 
4CI C14 H3  SING N N 35 
4CI C11 H6  SING N N 36 
4CI C10 H7  SING N N 37 
4CI C4  H8  SING N N 38 
4CI C3  H9  SING N N 39 
4CI C37 H10 SING N N 40 
4CI C36 H11 SING N N 41 
4CI O35 H12 SING N N 42 
4CI C33 H13 SING N N 43 
4CI C5  H14 SING N N 44 
4CI O1  H15 SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
4CI InChI            InChI                1.03  "InChI=1S/C21H13NO5S/c23-12-2-5-16-18(8-12)26-19-9-13(24)3-6-17(19)21(16)15-4-1-11(22-10-28)7-14(15)20(25)27-21/h1-10,23-24H,(H,22,28)" 
4CI InChIKey         InChI                1.03  XXJHFVNZDWPRIR-UHFFFAOYSA-N                                                                                                             
4CI SMILES_CANONICAL CACTVS               3.385 "Oc1ccc2c(Oc3cc(O)ccc3[C@@]24OC(=O)c5cc(NC=S)ccc45)c1"                                                                                  
4CI SMILES           CACTVS               3.385 "Oc1ccc2c(Oc3cc(O)ccc3[C]24OC(=O)c5cc(NC=S)ccc45)c1"                                                                                    
4CI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1NC=S)C(=O)OC23c4ccc(cc4Oc5c3ccc(c5)O)O"                                                                                      
4CI SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1NC=S)C(=O)OC23c4ccc(cc4Oc5c3ccc(c5)O)O"                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           4CI 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[3',6'-bis(oxidanyl)-3-oxidanylidene-spiro[2-benzofuran-1,9'-xanthene]-5-yl]methanethioamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
4CI "Create component" 2021-07-27 PDBJ 
4CI "Initial release"  2022-07-06 RCSB 
4CI "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            4CI 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C14 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
