data_5AI
# 
_chem_comp.id                                    5AI 
_chem_comp.name                                  "alpha-D-glucopyranosyl 1,3,4-trisphosphate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H15 O15 P3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "[(2R,3R,4R,5R,6R)-2-(hydroxymethyl)-5-oxidanyl-3,6-diphosphonooxy-oxan-4-yl] dihydrogen phosphate" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-07-12 
_chem_comp.pdbx_modified_date                    2024-02-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        420.096 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5AI 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8PPH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5AI O01 O1  O 0 1 N N N N N N 9.832  30.339 82.700 2.535  -0.419 -0.125 O01 5AI 1  
5AI O03 O2  O 0 1 N N N N N N 10.408 31.641 80.637 4.332  -0.851 -1.995 O03 5AI 2  
5AI O04 O3  O 0 1 N N N N N N 8.038  30.838 81.039 4.508  1.283  -0.470 O04 5AI 3  
5AI P1  P1  P 0 1 N N N N N N 9.517  30.515 81.119 4.090  -0.271 -0.513 P1  5AI 4  
5AI O02 O4  O 0 1 N N N N N N 9.865  29.185 80.488 4.914  -1.030 0.455  O02 5AI 5  
5AI O11 O5  O 0 1 N N N N N N 14.406 26.412 85.588 -3.747 0.837  0.802  O11 5AI 6  
5AI O12 O6  O 0 1 N N N N N N 14.578 27.862 87.664 -3.942 1.778  -1.532 O12 5AI 7  
5AI O08 O7  O 0 1 N N N N N N 10.862 29.869 87.084 -1.457 -1.456 0.767  O08 5AI 8  
5AI P4  P2  P 0 1 N N N N N N 13.673 27.246 86.614 -3.064 1.704  -0.184 P4  5AI 9  
5AI O05 O8  O 0 1 N N N N N N 11.038 30.669 89.496 -2.649 -1.798 -1.551 O05 5AI 10 
5AI O06 O9  O 0 1 N N N N N N 10.128 32.145 87.658 -1.060 -3.525 -0.623 O06 5AI 11 
5AI O10 O10 O 0 1 N N N N N N 12.483 26.525 87.214 -2.894 3.183  0.428  O10 5AI 12 
5AI O09 O11 O 0 1 N N N N N N 12.996 28.481 85.808 -1.613 1.093  -0.521 O09 5AI 13 
5AI O07 O12 O 0 1 N N N N N N 12.582 31.583 87.717 -3.309 -3.303 0.501  O07 5AI 14 
5AI P3  P3  P 0 1 N N N N N N 11.179 31.133 88.060 -2.096 -2.542 -0.235 P3  5AI 15 
5AI C1  C1  C 0 1 N N R N N N 9.542  29.348 83.578 2.019  -0.090 1.166  C1  5AI 16 
5AI C2  C2  C 0 1 N N R N N N 9.498  29.634 85.077 0.807  -0.973 1.472  C2  5AI 17 
5AI C3  C3  C 0 1 N N R N N N 10.906 29.727 85.647 -0.294 -0.689 0.446  C3  5AI 18 
5AI C4  C4  C 0 1 N N R N N N 11.661 28.469 85.268 -0.638 0.803  0.482  C4  5AI 19 
5AI C5  C5  C 0 1 N N R N N N 11.717 28.383 83.753 0.630  1.618  0.214  C5  5AI 20 
5AI C6  C6  C 0 1 N N N N N N 12.529 27.220 83.243 0.306  3.110  0.308  C6  5AI 21 
5AI O2  O13 O 0 1 N N N N N N 8.796  30.849 85.311 1.187  -2.349 1.396  O2  5AI 22 
5AI O5  O14 O 0 1 N N N N N N 10.370 28.230 83.273 1.623  1.283  1.185  O5  5AI 23 
5AI O6  O15 O 0 1 N N N N N N 12.598 27.210 81.821 1.460  3.871  -0.056 O6  5AI 24 
5AI H1  H1  H 0 1 N N N N N N 11.038 31.302 80.012 5.250  -0.794 -2.295 H1  5AI 25 
5AI H2  H2  H 0 1 N N N N N N 7.583  30.131 80.597 4.008  1.842  -1.081 H2  5AI 26 
5AI H3  H3  H 0 1 N N N N N N 15.478 27.611 87.493 -4.830 2.138  -1.403 H3  5AI 27 
5AI H4  H4  H 0 1 N N N N N N 10.297 31.106 89.899 -3.332 -1.138 -1.371 H4  5AI 28 
5AI H5  H5  H 0 1 N N N N N N 12.410 25.659 86.829 -2.453 3.806  -0.166 H5  5AI 29 
5AI H6  H6  H 0 1 N N N N N N 12.549 32.437 87.303 -3.742 -3.973 -0.045 H6  5AI 30 
5AI H7  H7  H 0 1 N N N N N N 8.519  29.022 83.338 2.790  -0.257 1.918  H7  5AI 31 
5AI H8  H8  H 0 1 N N N N N N 8.977  28.802 85.573 0.439  -0.752 2.474  H8  5AI 32 
5AI H9  H9  H 0 1 N N N N N N 11.413 30.595 85.201 0.057  -0.960 -0.550 H9  5AI 33 
5AI H10 H10 H 0 1 N N N N N N 11.111 27.597 85.652 -1.038 1.061  1.463  H10 5AI 34 
5AI H11 H11 H 0 1 N N N N N N 12.148 29.316 83.362 1.005  1.389  -0.783 H11 5AI 35 
5AI H12 H12 H 0 1 N N N N N N 12.064 26.283 83.584 -0.514 3.348  -0.369 H12 5AI 36 
5AI H13 H13 H 0 1 N N N N N N 13.549 27.292 83.649 0.017  3.356  1.330  H13 5AI 37 
5AI H14 H14 H 0 1 N N N N N N 9.183  31.301 86.051 1.886  -2.599 2.017  H14 5AI 38 
5AI H15 H15 H 0 1 N N N N N N 13.115 26.467 81.534 1.327  4.828  -0.019 H15 5AI 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5AI O02 P1  DOUB N N 1  
5AI O03 P1  SING N N 2  
5AI O04 P1  SING N N 3  
5AI P1  O01 SING N N 4  
5AI O6  C6  SING N N 5  
5AI O01 C1  SING N N 6  
5AI C6  C5  SING N N 7  
5AI O5  C1  SING N N 8  
5AI O5  C5  SING N N 9  
5AI C1  C2  SING N N 10 
5AI C5  C4  SING N N 11 
5AI C2  O2  SING N N 12 
5AI C2  C3  SING N N 13 
5AI C4  C3  SING N N 14 
5AI C4  O09 SING N N 15 
5AI O11 P4  DOUB N N 16 
5AI C3  O08 SING N N 17 
5AI O09 P4  SING N N 18 
5AI P4  O10 SING N N 19 
5AI P4  O12 SING N N 20 
5AI O08 P3  SING N N 21 
5AI O06 P3  DOUB N N 22 
5AI O07 P3  SING N N 23 
5AI P3  O05 SING N N 24 
5AI O03 H1  SING N N 25 
5AI O04 H2  SING N N 26 
5AI O12 H3  SING N N 27 
5AI O05 H4  SING N N 28 
5AI O10 H5  SING N N 29 
5AI O07 H6  SING N N 30 
5AI C1  H7  SING N N 31 
5AI C2  H8  SING N N 32 
5AI C3  H9  SING N N 33 
5AI C4  H10 SING N N 34 
5AI C5  H11 SING N N 35 
5AI C6  H12 SING N N 36 
5AI C6  H13 SING N N 37 
5AI O2  H14 SING N N 38 
5AI O6  H15 SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5AI InChI            InChI                1.06  "InChI=1S/C6H15O15P3/c7-1-2-4(19-22(9,10)11)5(20-23(12,13)14)3(8)6(18-2)21-24(15,16)17/h2-8H,1H2,(H2,9,10,11)(H2,12,13,14)(H2,15,16,17)/t2-,3-,4-,5-,6-/m1/s1" 
5AI InChIKey         InChI                1.06  IXJMLEYTDGNHLU-QZABAPFNSA-N                                                                                                                                    
5AI SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@H](O[P](O)(O)=O)[C@H](O)[C@@H](O[P](O)(O)=O)[C@@H]1O[P](O)(O)=O"                                                                                  
5AI SMILES           CACTVS               3.385 "OC[CH]1O[CH](O[P](O)(O)=O)[CH](O)[CH](O[P](O)(O)=O)[CH]1O[P](O)(O)=O"                                                                                         
5AI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)O"                                                                                    
5AI SMILES           "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)O"                                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           5AI 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{R},3~{R},4~{R},5~{R},6~{R})-2-(hydroxymethyl)-5-oxidanyl-3,6-diphosphonooxy-oxan-4-yl] dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5AI "Create component" 2023-07-12 PDBE 
5AI "Initial release"  2024-02-28 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      5AI 
_pdbx_chem_comp_synonyms.name         "[(2R,3R,4R,5R,6R)-2-(hydroxymethyl)-5-oxidanyl-3,6-diphosphonooxy-oxan-4-yl] dihydrogen phosphate" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
