data_5PI
#

_chem_comp.id                                   5PI
_chem_comp.name                                 "N-(ETHYLSULFONYL)-5-PROPOXY-L-TRYPTOPHYL-N~1~-{4-[AMINO(IMINO)METHYL]BENZYL}-L-GLUTAMAMIDE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H39 N7 O6 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;2-[2-ETHANESULFONYLAMINO-3-(5-PROPOXY-1H-INDOL-3-YL)-PROPIONYLAMINO]-PENTANEDIOIC ACID 5-AMIDE
1-(4-CARBAMIMIDOYL-BENZYLAMIDE)
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-12-17
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       613.728
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5PI
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1WV7
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5PI  C14   C14   C  0  1  N  N  N  35.774   6.979  10.145  -0.048   0.072    0.145  C14   5PI   1  
5PI  O1    O1    O  0  1  N  N  N  34.901   7.202  10.975   0.581   1.106    0.069  O1    5PI   2  
5PI  N5    N5    N  0  1  N  N  N  35.694   7.398   8.829  -0.317  -0.636   -0.968  N5    5PI   3  
5PI  C15   C15   C  0  1  N  N  S  34.566   8.296   8.403   0.150  -0.158   -2.271  C15   5PI   4  
5PI  C18   C18   C  0  1  N  N  N  34.574   8.643   6.945   1.541  -0.727   -2.554  C18   5PI   5  
5PI  C19   C19   C  0  1  N  N  N  35.895   9.232   6.512   2.511  -0.267   -1.464  C19   5PI   6  
5PI  C20   C20   C  0  1  N  N  N  33.182   7.668   8.659  -0.805  -0.611   -3.345  C20   5PI   7  
5PI  O5    O5    O  0  1  N  N  N  32.949   6.499   8.418  -1.781  -1.269   -3.050  O5    5PI   8  
5PI  N6    N6    N  0  1  N  N  N  32.292   8.482   9.154  -0.575  -0.286   -4.632  N6    5PI   9  
5PI  C21   C21   C  0  1  N  N  N  30.979   7.941   9.381  -1.504  -0.727   -5.676  C21   5PI  10  
5PI  C16   C16   C  0  1  Y  N  N  31.500   6.526  11.432  -0.167  -1.018   -7.771  C16   5PI  11  
5PI  C17   C17   C  0  1  Y  N  N  31.259   6.210  12.769   0.276  -0.573   -8.999  C17   5PI  12  
5PI  C22   C22   C  0  1  Y  N  N  30.253   6.884  13.499  -0.139   0.667   -9.481  C22   5PI  13  
5PI  C23   C23   C  0  1  Y  N  N  29.420   7.784  12.820  -1.002   1.452   -8.716  C23   5PI  14  
5PI  C24   C24   C  0  1  Y  N  N  29.632   8.075  11.482  -1.444   0.994   -7.491  C24   5PI  15  
5PI  C25   C25   C  0  1  Y  N  N  30.696   7.490  10.787  -1.023  -0.235   -7.017  C25   5PI  16  
5PI  C26   C26   C  0  1  N  N  N  30.139   6.711  14.968   0.333   1.150  -10.798  C26   5PI  17  
5PI  N1    N1    N  0  1  N  N  N  30.891   5.826  15.613  -0.079   2.377  -11.271  N1    5PI  18  
5PI  C2    C2    C  0  1  N  N  N  35.857   9.684   5.094   3.882  -0.828   -1.742  C2    5PI  19  
5PI  O2    O2    O  0  1  N  N  N  35.856   8.905   4.183   4.065  -1.527   -2.716  O2    5PI  20  
5PI  N3    N3    N  0  1  N  N  N  35.852  10.984   4.939   4.905  -0.553   -0.908  N3    5PI  21  
5PI  C1    C1    C  0  1  N  N  N  38.105   7.027  11.358   0.536  -1.320    2.111  C1    5PI  22  
5PI  N4    N4    N  0  1  N  N  N  36.414   5.167  11.451  -0.777   0.726    2.366  N4    5PI  23  
5PI  C5    C5    C  0  1  N  N  R  37.017   6.176  10.608  -0.529  -0.418    1.486  C5    5PI  24  
5PI  S1    S1    S  0  1  N  N  N  36.506   3.567  10.948  -2.291   0.981    2.986  S1    5PI  25  
5PI  O4    O4    O  0  1  N  N  N  36.290   3.722   9.553  -2.098   2.102    3.837  O4    5PI  26  
5PI  O3    O3    O  0  1  N  N  N  35.600   2.928  11.839  -3.102   1.048    1.821  O3    5PI  27  
5PI  C9    C9    C  0  1  N  N  N  38.146   2.961  11.124  -2.609  -0.531    3.936  C9    5PI  28  
5PI  C8    C8    C  0  1  N  N  N  38.422   2.536  12.524  -3.994  -0.446    4.581  C8    5PI  29  
5PI  N2    N2    N  0  1  N  N  N  29.348   7.500  15.708   1.140   0.416  -11.510  N2    5PI  30  
5PI  C13   C13   C  0  1  Y  N  N  43.109   4.800  10.856   0.314  -0.458    7.428  C13   5PI  31  
5PI  C12   C12   C  0  1  Y  N  N  42.507   4.664  12.152  -0.325  -1.615    7.044  C12   5PI  32  
5PI  C3    C3    C  0  1  Y  N  N  41.231   5.169  12.443  -0.358  -1.979    5.703  C3    5PI  33  
5PI  C4    C4    C  0  1  Y  N  N  40.482   5.825  11.402   0.266  -1.159    4.746  C4    5PI  34  
5PI  C27   C27   C  0  1  Y  N  N  41.074   5.980  10.136   0.908   0.014    5.146  C27   5PI  35  
5PI  C6    C6    C  0  1  Y  N  N  42.397   5.486   9.822   0.934   0.356    6.484  C6    5PI  36  
5PI  N7    N7    N  0  1  Y  N  N  40.481   5.252  13.602  -0.904  -3.049    5.025  N7    5PI  37  
5PI  C29   C29   C  0  1  Y  N  N  39.317   5.894  13.350  -0.647  -2.931    3.687  C29   5PI  38  
5PI  C28   C28   C  0  1  Y  N  N  39.248   6.262  11.999   0.055  -1.812    3.452  C28   5PI  39  
5PI  O6    O6    O  0  1  N  N  N  43.058   5.644   8.593   1.562   1.495    6.880  O6    5PI  40  
5PI  C7    C7    C  0  1  N  N  N  42.279   5.363   7.442   1.413   1.577    8.299  C7    5PI  41  
5PI  C10   C10   C  0  1  N  N  N  43.182   5.534   6.222   2.101   2.844    8.811  C10   5PI  42  
5PI  C11   C11   C  0  1  N  N  N  42.465   5.175   4.923   1.942   2.931   10.331  C11   5PI  43  
5PI  HN5   HN5   H  0  1  N  N  N  36.428   7.062   8.206  -0.821  -1.463   -0.906  HN5   5PI  44  
5PI  H15   H15   H  0  1  N  N  N  34.734   9.209   9.021   0.197   0.930   -2.263  H15   5PI  45  
5PI  H181  1H18  H  0  0  N  N  N  33.725   9.318   6.685   1.494  -1.816   -2.562  H181  5PI  46  
5PI  H182  2H18  H  0  0  N  N  N  34.298   7.763   6.318   1.889  -0.372   -3.524  H182  5PI  47  
5PI  H191  1H19  H  0  0  N  N  N  36.735   8.521   6.690   2.559   0.821   -1.456  H191  5PI  48  
5PI  H192  2H19  H  0  0  N  N  N  36.216  10.055   7.193   2.163  -0.623   -0.494  H192  5PI  49  
5PI  HN6   HN6   H  0  1  N  N  N  32.591   9.439   9.343   0.204   0.239   -4.868  HN6   5PI  50  
5PI  H211  1H21  H  0  0  N  N  N  30.782   7.108   8.667  -1.552  -1.816   -5.684  H211  5PI  51  
5PI  H212  2H21  H  0  0  N  N  N  30.204   8.672   9.052  -2.496  -0.321   -5.475  H212  5PI  52  
5PI  H16   H16   H  0  1  N  N  N  32.317   6.019  10.891   0.154  -1.978   -7.397  H16   5PI  53  
5PI  H17   H17   H  0  1  N  N  N  31.866   5.425  13.251   0.945  -1.185   -9.587  H17   5PI  54  
5PI  H23   H23   H  0  1  N  N  N  28.583   8.272  13.348  -1.328   2.413   -9.083  H23   5PI  55  
5PI  H24   H24   H  0  1  N  N  N  28.951   8.775  10.968  -2.112   1.600   -6.899  H24   5PI  56  
5PI  HN11  1HN1  H  0  0  N  N  N  31.868   6.019  15.392   0.230   2.694  -12.134  HN11  5PI  57  
5PI  HN12  2HN1  H  0  0  N  N  N  30.813   5.707  16.623  -0.679   2.924  -10.741  HN12  5PI  58  
5PI  HN31  1HN3  H  0  0  N  N  N  35.826  11.294   3.968   5.787  -0.914   -1.087  HN31  5PI  59  
5PI  HN32  2HN3  H  0  0  N  N  N  35.853  11.647   5.714   4.758   0.005   -0.129  HN32  5PI  60  
5PI  H11   1H1   H  0  1  N  N  N  37.613   7.673  12.122   1.459  -0.756    2.241  H11   5PI  61  
5PI  H12A  2H1   H  0  0  N  N  N  38.514   7.802  10.668   0.720  -2.172    1.457  H12A  5PI  62  
5PI  HN4   HN4   H  0  1  N  N  N  35.438   5.410  11.619  -0.054   1.334    2.585  HN4   5PI  63  
5PI  H5    H5    H  0  1  N  N  N  37.608   5.770   9.754  -1.452  -0.983    1.356  H5    5PI  64  
5PI  H91   1H9   H  0  1  N  N  N  38.897   3.705  10.768  -2.571  -1.393    3.270  H91   5PI  65  
5PI  H92   2H9   H  0  1  N  N  N  38.358   2.141  10.399  -1.852  -0.638    4.713  H92   5PI  66  
5PI  H81   1H8   H  0  1  N  N  N  37.672   1.792  12.880  -4.185  -1.355    5.151  H81   5PI  67  
5PI  H82   2H8   H  0  1  N  N  N  39.463   2.152  12.636  -4.032   0.415    5.247  H82   5PI  68  
5PI  H83   3H8   H  0  1  N  N  N  38.210   3.356  13.249  -4.751  -0.339    3.804  H83   5PI  69  
5PI  HN2   HN2   H  0  1  N  N  N  29.567   8.322  15.145   1.450   0.733  -12.373  HN2   5PI  70  
5PI  H13   H13   H  0  1  N  N  N  44.110   4.381  10.657   0.337  -0.180    8.471  H13   5PI  71  
5PI  H12   H12   H  0  1  N  N  N  43.050   4.148  12.962  -0.802  -2.239    7.785  H12   5PI  72  
5PI  H27   H27   H  0  1  N  N  N  40.483   6.505   9.366   1.384   0.649    4.414  H27   5PI  73  
5PI  HN7   HN7   H  0  1  N  N  N  40.749   4.890  14.517  -1.398  -3.776    5.436  HN7   5PI  74  
5PI  H29   H29   H  0  1  N  N  N  38.550   6.086  14.120  -0.964  -3.634    2.931  H29   5PI  75  
5PI  H71   1H7   H  0  1  N  N  N  41.351   5.978   7.385   1.870   0.702    8.763  H71   5PI  76  
5PI  H72   2H7   H  0  1  N  N  N  41.789   4.362   7.483   0.354   1.611    8.552  H72   5PI  77  
5PI  H101  1H10  H  0  0  N  N  N  44.128   4.955   6.335   1.645   3.718    8.347  H101  5PI  78  
5PI  H102  2H10  H  0  0  N  N  N  43.610   6.563   6.177   3.161   2.809    8.558  H102  5PI  79  
5PI  H111  1H11  H  0  0  N  N  N  41.519   5.754   4.810   2.432   3.834   10.696  H111  5PI  80  
5PI  H112  2H11  H  0  0  N  N  N  43.124   5.300   4.032   0.883   2.965   10.584  H112  5PI  81  
5PI  H113  3H11  H  0  0  N  N  N  42.037   4.146   4.968   2.399   2.057   10.794  H113  5PI  82  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5PI  C14  O1    DOUB  N  N   1  
5PI  C14  N5    SING  N  N   2  
5PI  C14  C5    SING  N  N   3  
5PI  N5   C15   SING  N  N   4  
5PI  N5   HN5   SING  N  N   5  
5PI  C15  C18   SING  N  N   6  
5PI  C15  C20   SING  N  N   7  
5PI  C15  H15   SING  N  N   8  
5PI  C18  C19   SING  N  N   9  
5PI  C18  H181  SING  N  N  10  
5PI  C18  H182  SING  N  N  11  
5PI  C19  C2    SING  N  N  12  
5PI  C19  H191  SING  N  N  13  
5PI  C19  H192  SING  N  N  14  
5PI  C20  O5    DOUB  N  N  15  
5PI  C20  N6    SING  N  N  16  
5PI  N6   C21   SING  N  N  17  
5PI  N6   HN6   SING  N  N  18  
5PI  C21  C25   SING  N  N  19  
5PI  C21  H211  SING  N  N  20  
5PI  C21  H212  SING  N  N  21  
5PI  C16  C17   DOUB  Y  N  22  
5PI  C16  C25   SING  Y  N  23  
5PI  C16  H16   SING  N  N  24  
5PI  C17  C22   SING  Y  N  25  
5PI  C17  H17   SING  N  N  26  
5PI  C22  C23   DOUB  Y  N  27  
5PI  C22  C26   SING  N  N  28  
5PI  C23  C24   SING  Y  N  29  
5PI  C23  H23   SING  N  N  30  
5PI  C24  C25   DOUB  Y  N  31  
5PI  C24  H24   SING  N  N  32  
5PI  C26  N1    SING  N  N  33  
5PI  C26  N2    DOUB  N  N  34  
5PI  N1   HN11  SING  N  N  35  
5PI  N1   HN12  SING  N  N  36  
5PI  C2   O2    DOUB  N  N  37  
5PI  C2   N3    SING  N  N  38  
5PI  N3   HN31  SING  N  N  39  
5PI  N3   HN32  SING  N  N  40  
5PI  C1   C5    SING  N  N  41  
5PI  C1   C28   SING  N  N  42  
5PI  C1   H11   SING  N  N  43  
5PI  C1   H12A  SING  N  N  44  
5PI  N4   C5    SING  N  N  45  
5PI  N4   S1    SING  N  N  46  
5PI  N4   HN4   SING  N  N  47  
5PI  C5   H5    SING  N  N  48  
5PI  S1   O4    DOUB  N  N  49  
5PI  S1   O3    DOUB  N  N  50  
5PI  S1   C9    SING  N  N  51  
5PI  C9   C8    SING  N  N  52  
5PI  C9   H91   SING  N  N  53  
5PI  C9   H92   SING  N  N  54  
5PI  C8   H81   SING  N  N  55  
5PI  C8   H82   SING  N  N  56  
5PI  C8   H83   SING  N  N  57  
5PI  N2   HN2   SING  N  N  58  
5PI  C13  C12   DOUB  Y  N  59  
5PI  C13  C6    SING  Y  N  60  
5PI  C13  H13   SING  N  N  61  
5PI  C12  C3    SING  Y  N  62  
5PI  C12  H12   SING  N  N  63  
5PI  C3   C4    DOUB  Y  N  64  
5PI  C3   N7    SING  Y  N  65  
5PI  C4   C27   SING  Y  N  66  
5PI  C4   C28   SING  Y  N  67  
5PI  C27  C6    DOUB  Y  N  68  
5PI  C27  H27   SING  N  N  69  
5PI  C6   O6    SING  N  N  70  
5PI  N7   C29   SING  Y  N  71  
5PI  N7   HN7   SING  N  N  72  
5PI  C29  C28   DOUB  Y  N  73  
5PI  C29  H29   SING  N  N  74  
5PI  O6   C7    SING  N  N  75  
5PI  C7   C10   SING  N  N  76  
5PI  C7   H71   SING  N  N  77  
5PI  C7   H72   SING  N  N  78  
5PI  C10  C11   SING  N  N  79  
5PI  C10  H101  SING  N  N  80  
5PI  C10  H102  SING  N  N  81  
5PI  C11  H111  SING  N  N  82  
5PI  C11  H112  SING  N  N  83  
5PI  C11  H113  SING  N  N  84  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5PI  SMILES            ACDLabs               10.04  "O=C(NCc1ccc(C(=[N@H])N)cc1)C(NC(=O)C(NS(=O)(=O)CC)Cc3c2cc(OCCC)ccc2nc3)CCC(=O)N"  
5PI  SMILES_CANONICAL  CACTVS                3.341  "CCCOc1ccc2[nH]cc(C[C@@H](N[S](=O)(=O)CC)C(=O)N[C@@H](CCC(N)=O)C(=O)NCc3ccc(cc3)C(N)=N)c2c1"  
5PI  SMILES            CACTVS                3.341  "CCCOc1ccc2[nH]cc(C[CH](N[S](=O)(=O)CC)C(=O)N[CH](CCC(N)=O)C(=O)NCc3ccc(cc3)C(N)=N)c2c1"  
5PI  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CCCOc1ccc2c(c1)c(c[nH]2)C[C@H](C(=O)N[C@@H](CCC(=O)N)C(=O)NCc3ccc(cc3)C(=N)N)NS(=O)(=O)CC"  
5PI  SMILES            "OpenEye OEToolkits"  1.5.0  "CCCOc1ccc2c(c1)c(c[nH]2)CC(C(=O)NC(CCC(=O)N)C(=O)NCc3ccc(cc3)C(=N)N)NS(=O)(=O)CC"  
5PI  InChI             InChI                 1.03   "InChI=1S/C29H39N7O6S/c1-3-13-42-21-9-10-23-22(15-21)20(17-33-23)14-25(36-43(40,41)4-2)29(39)35-24(11-12-26(30)37)28(38)34-16-18-5-7-19(8-6-18)27(31)32/h5-10,15,17,24-25,33,36H,3-4,11-14,16H2,1-2H3,(H2,30,37)(H3,31,32)(H,34,38)(H,35,39)/t24-,25+/m0/s1"  
5PI  InChIKey          InChI                 1.03   UHMORXPPNXDKHY-LOSJGSFVSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5PI  "SYSTEMATIC NAME"  ACDLabs               10.04  "N-(ethylsulfonyl)-5-propoxy-D-tryptophyl-N~1~-(4-carbamimidoylbenzyl)-L-glutamamide"  
5PI  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S)-N-[(4-carbamimidoylphenyl)methyl]-2-[[(2R)-2-(ethylsulfonylamino)-3-(5-propoxy-1H-indol-3-yl)propanoyl]amino]pentanediamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5PI  "Create component"   2004-12-17  RCSB  
5PI  "Modify descriptor"  2011-06-04  RCSB  
5PI  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     5PI
_pdbx_chem_comp_synonyms.name        "2-[2-ETHANESULFONYLAMINO-3-(5-PROPOXY-1H-INDOL-3-YL)-PROPIONYLAMINO]-PENTANEDIOIC ACID 5-AMIDE 1-(4-CARBAMIMIDOYL-BENZYLAMIDE)"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
