data_5WI
# 
_chem_comp.id                                    5WI 
_chem_comp.name                                  "(3S,6Z)-3-[(2S)-butan-2-yl]-6-[(2R)-2-methyl-2,3-bis(oxidanyl)propylidene]piperazine-2,5-dione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H20 N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-08-24 
_chem_comp.pdbx_modified_date                    2023-02-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        256.298 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5WI 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7V3E 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5WI C1  C1  C 0 1 N N S 19.065 34.901 162.944 2.101  -0.047 0.825  C1  5WI 1  
5WI C2  C2  C 0 1 N N N 18.068 33.845 163.471 0.944  0.813  1.227  C2  5WI 2  
5WI C4  C3  C 0 1 N N N 17.678 33.042 161.194 -0.629 -0.793 0.456  C4  5WI 3  
5WI C5  C4  C 0 1 N N N 19.011 33.512 160.812 0.444  -1.810 0.411  C5  5WI 4  
5WI C9  C5  C 0 1 N N N 17.041 32.252 160.310 -1.844 -1.056 -0.031 C9  5WI 5  
5WI C10 C6  C 0 1 N N S 18.396 36.168 162.450 2.702  0.505  -0.469 C10 5WI 6  
5WI C11 C7  C 0 1 N N R 15.771 31.506 160.718 -2.873 0.042  -0.122 C11 5WI 7  
5WI C12 C8  C 0 1 N N N 14.620 32.513 160.767 -3.602 -0.052 -1.464 C12 5WI 8  
5WI C14 C9  C 0 1 N N N 15.478 30.425 159.690 -3.882 -0.110 1.018  C14 5WI 9  
5WI C16 C10 C 0 1 N N N 16.891 36.264 162.741 3.180  1.940  -0.238 C16 5WI 10 
5WI C17 C11 C 0 1 N N N 19.112 37.387 163.049 3.887  -0.365 -0.892 C17 5WI 11 
5WI C18 C12 C 0 1 N N N 20.543 37.420 162.534 4.410  0.111  -2.249 C18 5WI 12 
5WI N3  N1  N 0 1 N N N 17.402 32.947 162.549 -0.335 0.455  1.026  N3  5WI 13 
5WI N6  N2  N 0 1 N N N 19.736 34.427 161.714 1.718  -1.435 0.609  N6  5WI 14 
5WI O7  O1  O 0 1 N N N 19.508 33.137 159.814 0.174  -2.976 0.195  O7  5WI 15 
5WI O8  O2  O 0 1 N N N 17.849 33.770 164.631 1.171  1.880  1.757  O8  5WI 16 
5WI O13 O3  O 0 1 N N N 13.424 31.905 160.348 -4.577 0.989  -1.550 O13 5WI 17 
5WI O15 O4  O 0 1 N N N 15.961 30.931 161.985 -2.225 1.311  -0.019 O15 5WI 18 
5WI H1  H1  H 0 1 N N N 19.803 35.140 163.724 2.857  -0.009 1.609  H1  5WI 19 
5WI H3  H3  H 0 1 N N N 17.429 32.145 159.308 -2.090 -2.055 -0.361 H3  5WI 20 
5WI H5  H5  H 0 1 N N N 18.525 36.212 161.358 1.946  0.495  -1.254 H5  5WI 21 
5WI H6  H6  H 0 1 N N N 14.849 33.359 160.103 -2.882 0.056  -2.276 H6  5WI 22 
5WI H7  H7  H 0 1 N N N 14.500 32.878 161.798 -4.095 -1.020 -1.543 H7  5WI 23 
5WI H8  H8  H 0 1 N N N 14.565 29.883 159.977 -3.363 -0.043 1.974  H8  5WI 24 
5WI H9  H9  H 0 1 N N N 15.335 30.888 158.702 -4.626 0.684  0.952  H9  5WI 25 
5WI H10 H10 H 0 1 N N N 16.323 29.722 159.647 -4.376 -1.078 0.939  H10 5WI 26 
5WI H11 H11 H 0 1 N N N 16.500 37.213 162.346 3.608  2.333  -1.160 H11 5WI 27 
5WI H12 H12 H 0 1 N N N 16.370 35.424 162.258 2.335  2.559  0.064  H12 5WI 28 
5WI H13 H13 H 0 1 N N N 16.724 36.223 163.828 3.936  1.949  0.547  H13 5WI 29 
5WI H14 H14 H 0 1 N N N 18.590 38.307 162.748 4.681  -0.285 -0.149 H14 5WI 30 
5WI H15 H15 H 0 1 N N N 19.116 37.310 164.146 3.566  -1.404 -0.971 H15 5WI 31 
5WI H16 H16 H 0 1 N N N 21.066 38.290 162.957 3.617  0.031  -2.992 H16 5WI 32 
5WI H17 H17 H 0 1 N N N 21.062 36.498 162.835 4.732  1.149  -2.171 H17 5WI 33 
5WI H18 H18 H 0 1 N N N 20.536 37.495 161.437 5.255  -0.509 -2.551 H18 5WI 34 
5WI H19 H19 H 0 1 N N N 16.751 32.267 162.886 -1.053 1.058  1.274  H19 5WI 35 
5WI H20 H20 H 0 1 N N N 20.667 34.722 161.497 2.410  -2.115 0.609  H20 5WI 36 
5WI H21 H21 H 0 1 N N N 12.717 32.539 160.382 -5.078 0.991  -2.377 H21 5WI 37 
5WI H22 H22 H 0 1 N N N 16.143 31.614 162.619 -1.638 1.515  -0.760 H22 5WI 38 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5WI C14 C11 SING N N 1  
5WI O7  C5  DOUB N N 2  
5WI C9  C11 SING N N 3  
5WI C9  C4  DOUB N Z 4  
5WI O13 C12 SING N N 5  
5WI C11 C12 SING N N 6  
5WI C11 O15 SING N N 7  
5WI C5  C4  SING N N 8  
5WI C5  N6  SING N N 9  
5WI C4  N3  SING N N 10 
5WI N6  C1  SING N N 11 
5WI C10 C16 SING N N 12 
5WI C10 C1  SING N N 13 
5WI C10 C17 SING N N 14 
5WI C18 C17 SING N N 15 
5WI N3  C2  SING N N 16 
5WI C1  C2  SING N N 17 
5WI C2  O8  DOUB N N 18 
5WI C1  H1  SING N N 19 
5WI C9  H3  SING N N 20 
5WI C10 H5  SING N N 21 
5WI C12 H6  SING N N 22 
5WI C12 H7  SING N N 23 
5WI C14 H8  SING N N 24 
5WI C14 H9  SING N N 25 
5WI C14 H10 SING N N 26 
5WI C16 H11 SING N N 27 
5WI C16 H12 SING N N 28 
5WI C16 H13 SING N N 29 
5WI C17 H14 SING N N 30 
5WI C17 H15 SING N N 31 
5WI C18 H16 SING N N 32 
5WI C18 H17 SING N N 33 
5WI C18 H18 SING N N 34 
5WI N3  H19 SING N N 35 
5WI N6  H20 SING N N 36 
5WI O13 H21 SING N N 37 
5WI O15 H22 SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5WI InChI            InChI                1.03  "InChI=1S/C12H20N2O4/c1-4-7(2)9-11(17)13-8(10(16)14-9)5-12(3,18)6-15/h5,7,9,15,18H,4,6H2,1-3H3,(H,13,17)(H,14,16)/b8-5-/t7-,9-,12+/m0/s1" 
5WI InChIKey         InChI                1.03  KGPSCQPJVWXIGR-PMSMWWAASA-N                                                                                                               
5WI SMILES_CANONICAL CACTVS               3.385 "CC[C@H](C)[C@@H]1NC(=O)/C(NC1=O)=C/[C@@](C)(O)CO"                                                                                        
5WI SMILES           CACTVS               3.385 "CC[CH](C)[CH]1NC(=O)C(NC1=O)=C[C](C)(O)CO"                                                                                               
5WI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H](C)[C@H]1C(=O)N/C(=C\[C@](C)(CO)O)/C(=O)N1"                                                                                       
5WI SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(C)C1C(=O)NC(=CC(C)(CO)O)C(=O)N1"                                                                                                     
# 
_pdbx_chem_comp_identifier.comp_id           5WI 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(3~{S},6~{Z})-3-[(2~{S})-butan-2-yl]-6-[(2~{R})-2-methyl-2,3-bis(oxidanyl)propylidene]piperazine-2,5-dione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5WI "Create component" 2021-08-24 PDBJ 
5WI "Initial release"  2023-02-15 RCSB 
# 
