data_NPI
#

_chem_comp.id                                   NPI
_chem_comp.name                                 "(2S)-2-aminoheptanedioic acid"
_chem_comp.type                                 "L-PEPTIDE LINKING"
_chem_comp.pdbx_type                            ATOMP
_chem_comp.formula                              "C7 H13 N O4"
_chem_comp.mon_nstd_parent_comp_id              ALA
_chem_comp.pdbx_synonyms                        "L-2-AMINOPIMELIC ACID"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       175.182
_chem_comp.one_letter_code                      A
_chem_comp.three_letter_code                    NPI
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2TDT
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NPI  CA   C2    C  0  1  N  N  S  13.244  4.614   1.262   2.305  -0.474  -0.395  CA   NPI   1  
NPI  CB   C3    C  0  1  N  N  N  13.418  5.754   0.304   1.043   0.245   0.087  CB   NPI   2  
NPI  C4   C4    C  0  1  N  N  N  13.904  5.216  -1.008  -0.193  -0.512  -0.403  C4   NPI   3  
NPI  C5   C5    C  0  1  N  N  N  13.994  6.334  -2.069  -1.455   0.207   0.079  C5   NPI   4  
NPI  C6   C6    C  0  1  N  N  N  14.395  5.872  -3.454  -2.691  -0.549  -0.411  C6   NPI   5  
NPI  C    C1    C  0  1  N  N  N  14.543  3.802   1.276   3.519   0.335  -0.019  C    NPI   6  
NPI  O    O11   O  0  1  N  N  N  14.669  2.771   0.602   4.170   0.032   0.953  O    NPI   7  
NPI  OXT  O12   O  0  1  N  N  N  15.515  4.245   2.034   3.878   1.393  -0.762  OXT  NPI   8  
NPI  N    N2    N  0  1  N  N  N  12.917  5.107   2.602   2.385  -1.799   0.234  N    NPI   9  
NPI  C7   C7    C  0  1  N  N  N  14.398  6.925  -4.581  -3.934   0.159   0.064  C7   NPI  10  
NPI  O71  O71   O  0  1  N  N  N  14.232  6.630  -5.774  -3.840   1.165   0.727  O71  NPI  11  
NPI  O72  O72   O  0  1  N  N  N  14.613  8.205  -4.415  -5.145  -0.329  -0.249  O72  NPI  12  
NPI  HA   H2    H  0  1  N  N  N  12.409  3.975   0.941   2.267  -0.588  -1.479  HA   NPI  13  
NPI  H31  H31   H  0  1  N  N  N  12.455  6.267   0.160   1.040   0.280   1.176  H31  NPI  14  
NPI  H32  H32   H  0  1  N  N  N  14.153  6.467   0.707   1.029   1.260  -0.310  H32  NPI  15  
NPI  H41  H41   H  0  1  N  N  N  14.903  4.778  -0.866  -0.189  -0.547  -1.492  H41  NPI  16  
NPI  H42  H42   H  0  1  N  N  N  13.202  4.446  -1.360  -0.179  -1.527  -0.006  H42  NPI  17  
NPI  H51  H51   H  0  1  N  N  N  13.001  6.800  -2.147  -1.459   0.243   1.169  H51  NPI  18  
NPI  H52  H52   H  0  1  N  N  N  14.748  7.058  -1.727  -1.469   1.222  -0.318  H52  NPI  19  
NPI  H61  H61   H  0  1  N  N  N  15.421  5.483  -3.377  -2.687  -0.585  -1.500  H61  NPI  20  
NPI  H62  H62   H  0  1  N  N  N  13.681  5.089  -3.749  -2.677  -1.564  -0.014  H62  NPI  21  
NPI  HXT  HOC   H  0  1  N  N  N  16.263  3.664   1.963   4.664   1.882  -0.481  HXT  NPI  22  
NPI  H    HN21  H  0  0  N  N  N  12.805  4.332   3.225   2.422  -1.720   1.240  H    NPI  23  
NPI  H2   HN22  H  0  0  N  N  N  13.657  5.695   2.931   1.615  -2.383  -0.054  H2   NPI  24  
NPI  HO   HO    H  0  1  N  N  N  14.596  8.642  -5.259  -5.913   0.160   0.079  HO   NPI  25  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NPI  CA   CB   SING  N  N   1  
NPI  CA   C    SING  N  N   2  
NPI  CA   N    SING  N  N   3  
NPI  CA   HA   SING  N  N   4  
NPI  CB   C4   SING  N  N   5  
NPI  CB   H31  SING  N  N   6  
NPI  CB   H32  SING  N  N   7  
NPI  C4   C5   SING  N  N   8  
NPI  C4   H41  SING  N  N   9  
NPI  C4   H42  SING  N  N  10  
NPI  C5   C6   SING  N  N  11  
NPI  C5   H51  SING  N  N  12  
NPI  C5   H52  SING  N  N  13  
NPI  C6   C7   SING  N  N  14  
NPI  C6   H61  SING  N  N  15  
NPI  C6   H62  SING  N  N  16  
NPI  C    O    DOUB  N  N  17  
NPI  C    OXT  SING  N  N  18  
NPI  OXT  HXT  SING  N  N  19  
NPI  N    H    SING  N  N  20  
NPI  N    H2   SING  N  N  21  
NPI  C7   O71  DOUB  N  N  22  
NPI  C7   O72  SING  N  N  23  
NPI  O72  HO   SING  N  N  24  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NPI  SMILES            ACDLabs               12.01  "O=C(O)C(N)CCCCC(=O)O"  
NPI  InChI             InChI                 1.03   "InChI=1S/C7H13NO4/c8-5(7(11)12)3-1-2-4-6(9)10/h5H,1-4,8H2,(H,9,10)(H,11,12)/t5-/m0/s1"  
NPI  InChIKey          InChI                 1.03   JUQLUIFNNFIIKC-YFKPBYRVSA-N  
NPI  SMILES_CANONICAL  CACTVS                3.370  "N[C@@H](CCCCC(O)=O)C(O)=O"  
NPI  SMILES            CACTVS                3.370  "N[CH](CCCCC(O)=O)C(O)=O"  
NPI  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.2  "C(CCC(=O)O)C[C@@H](C(=O)O)N"  
NPI  SMILES            "OpenEye OEToolkits"  1.7.2  "C(CCC(=O)O)CC(C(=O)O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NPI  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2S)-2-aminoheptanedioic acid"  
NPI  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.2  "(2S)-2-azanylheptanedioic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NPI  "Create component"    1999-07-08  RCSB  
NPI  "Modify descriptor"   2011-06-04  RCSB  
NPI  "Other modification"  2011-07-08  RCSB  
NPI  "Modify synonyms"     2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     NPI
_pdbx_chem_comp_synonyms.name        "L-2-AMINOPIMELIC ACID"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
