data_YDI
# 
_chem_comp.id                                    YDI 
_chem_comp.name                                  "5-[4-(2-DIMETHYLAMINOETHYLOXY)PHENYL]-2-UREIDO-THIOPHENE-3-CARBOXAMIDE" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H20 N4 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-03-21 
_chem_comp.pdbx_modified_date                    2012-03-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        348.420 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YDI 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2YDI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YDI S01  S01  S 0 1 Y N N 2.704  -3.227 19.948 -2.312 -1.168 0.036  S01  YDI 1  
YDI C02  C02  C 0 1 Y N N 3.991  -3.974 19.066 -3.629 -0.089 -0.061 C02  YDI 2  
YDI C03  C03  C 0 1 Y N N 3.557  -5.127 18.434 -3.186 1.211  -0.031 C03  YDI 3  
YDI C04  C04  C 0 1 Y N N 2.178  -5.359 18.691 -1.797 1.330  0.070  C04  YDI 4  
YDI C05  C05  C 0 1 Y N N 1.562  -4.423 19.505 -1.157 0.153  0.118  C05  YDI 5  
YDI N06  N06  N 0 1 N N N 5.289  -3.465 19.010 -4.957 -0.469 -0.157 N06  YDI 6  
YDI C07  C07  C 0 1 N N N 5.610  -2.228 19.525 -5.284 -1.777 -0.178 C07  YDI 7  
YDI N08  N08  N 0 1 N N N 6.854  -1.792 19.161 -6.576 -2.147 -0.271 N08  YDI 8  
YDI O09  O09  O 0 1 N N N 4.858  -1.575 20.245 -4.412 -2.622 -0.113 O09  YDI 9  
YDI C10  C10  C 0 1 N N N 4.451  -5.924 17.623 -4.087 2.367  -0.098 C10  YDI 10 
YDI O11  O11  O 0 1 N N N 5.637  -5.648 17.490 -5.289 2.197  -0.186 O11  YDI 11 
YDI N12  N12  N 0 1 N N N 3.828  -6.981 16.992 -3.584 3.616  -0.064 N12  YDI 12 
YDI C14  C14  C 0 1 N N N -7.282 -3.661 20.314 8.368  -1.031 -0.326 C14  YDI 13 
YDI N15  N15  N 0 1 N N N -6.070 -2.840 20.513 7.088  -0.339 -0.533 N15  YDI 14 
YDI C16  C16  C 0 1 N N N -5.599 -2.870 21.920 6.667  0.365  0.686  C16  YDI 15 
YDI C17  C17  C 0 1 N N N -4.097 -3.041 21.877 5.186  0.731  0.578  C17  YDI 16 
YDI C19  C19  C 0 1 Y N N 0.187  -4.328 19.961 0.308  -0.009 0.225  C19  YDI 17 
YDI C20  C20  C 0 1 Y N N -0.248 -3.288 20.762 0.870  -1.287 0.267  C20  YDI 18 
YDI C21  C21  C 0 1 Y N N -1.570 -3.193 21.162 2.237  -1.434 0.367  C21  YDI 19 
YDI C22  C22  C 0 1 Y N N -2.460 -4.166 20.744 3.055  -0.314 0.424  C22  YDI 20 
YDI C2   C2   C 0 1 N N N -6.248 -1.457 20.008 7.167  0.583  -1.673 C2   YDI 21 
YDI C23  C23  C 0 1 Y N N -2.038 -5.208 19.946 2.501  0.958  0.382  C23  YDI 22 
YDI C24  C24  C 0 1 Y N N -0.722 -5.282 19.553 1.135  1.114  0.278  C24  YDI 23 
YDI O1   O1   O 0 1 N N N -3.804 -4.180 21.082 4.403  -0.464 0.523  O1   YDI 24 
YDI H06  H06  H 0 1 N N N 6.008  -4.014 18.583 -5.653 0.205  -0.208 H06  YDI 25 
YDI H04  H04  H 0 1 N N N 1.648  -6.206 18.280 -1.286 2.281  0.105  H04  YDI 26 
YDI H081 H081 H 0 0 N N N 7.187  -0.906 19.483 -7.272 -1.472 -0.323 H081 YDI 27 
YDI H082 H082 H 0 0 N N N 7.430  -2.359 18.573 -6.811 -3.088 -0.286 H082 YDI 28 
YDI H121 H121 H 0 0 N N N 4.350  -7.577 16.382 -2.626 3.752  0.006  H121 YDI 29 
YDI H122 H122 H 0 0 N N N 2.854  -7.151 17.145 -4.179 4.381  -0.108 H122 YDI 30 
YDI H141 H141 H 0 0 N N N -7.592 -3.608 19.260 8.287  -1.694 0.535  H141 YDI 31 
YDI H142 H142 H 0 0 N N N -7.065 -4.706 20.580 8.613  -1.615 -1.213 H142 YDI 32 
YDI H143 H143 H 0 0 N N N -8.092 -3.280 20.954 9.153  -0.296 -0.146 H143 YDI 33 
YDI H161 H161 H 0 0 N N N -5.863 -1.933 22.432 6.819  -0.282 1.550  H161 YDI 34 
YDI H162 H162 H 0 0 N N N -6.064 -3.707 22.461 7.258  1.273  0.804  H162 YDI 35 
YDI H21C H21C H 0 0 N N N -5.325 -0.883 20.176 7.480  0.036  -2.562 H21C YDI 36 
YDI H22C H22C H 0 0 N N N -6.471 -1.486 18.931 6.187  1.029  -1.847 H22C YDI 37 
YDI H23C H23C H 0 0 N N N -7.081 -0.976 20.542 7.890  1.369  -1.456 H23C YDI 38 
YDI H171 H171 H 0 0 N N N -3.631 -2.147 21.437 4.892  1.318  1.448  H171 YDI 39 
YDI H172 H172 H 0 0 N N N -3.707 -3.185 22.895 5.021  1.315  -0.328 H172 YDI 40 
YDI H20  H20  H 0 1 N N N 0.457  -2.535 21.082 0.234  -2.159 0.223  H20  YDI 41 
YDI H24  H24  H 0 1 N N N -0.397 -6.094 18.919 0.705  2.104  0.241  H24  YDI 42 
YDI H21  H21  H 0 1 N N N -1.900 -2.376 21.787 2.672  -2.422 0.400  H21  YDI 43 
YDI H23  H23  H 0 1 N N N -2.740 -5.965 19.630 3.141  1.827  0.428  H23  YDI 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YDI S01 C02  SING Y N 1  
YDI S01 C05  SING Y N 2  
YDI C02 C03  DOUB Y N 3  
YDI C02 N06  SING N N 4  
YDI C03 C04  SING Y N 5  
YDI C03 C10  SING N N 6  
YDI C04 C05  DOUB Y N 7  
YDI C05 C19  SING Y N 8  
YDI N06 C07  SING N N 9  
YDI C07 N08  SING N N 10 
YDI C07 O09  DOUB N N 11 
YDI C10 O11  DOUB N N 12 
YDI C10 N12  SING N N 13 
YDI C14 N15  SING N N 14 
YDI N15 C16  SING N N 15 
YDI N15 C2   SING N N 16 
YDI C16 C17  SING N N 17 
YDI C17 O1   SING N N 18 
YDI C19 C20  SING Y N 19 
YDI C19 C24  DOUB Y N 20 
YDI C20 C21  DOUB Y N 21 
YDI C21 C22  SING Y N 22 
YDI C22 C23  DOUB Y N 23 
YDI C22 O1   SING N N 24 
YDI C23 C24  SING Y N 25 
YDI N06 H06  SING N N 26 
YDI C04 H04  SING N N 27 
YDI N08 H081 SING N N 28 
YDI N08 H082 SING N N 29 
YDI N12 H121 SING N N 30 
YDI N12 H122 SING N N 31 
YDI C14 H141 SING N N 32 
YDI C14 H142 SING N N 33 
YDI C14 H143 SING N N 34 
YDI C16 H161 SING N N 35 
YDI C16 H162 SING N N 36 
YDI C2  H21C SING N N 37 
YDI C2  H22C SING N N 38 
YDI C2  H23C SING N N 39 
YDI C17 H171 SING N N 40 
YDI C17 H172 SING N N 41 
YDI C20 H20  SING N N 42 
YDI C24 H24  SING N N 43 
YDI C21 H21  SING N N 44 
YDI C23 H23  SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YDI SMILES           ACDLabs              12.01 "O=C(Nc1sc(cc1C(=O)N)c2ccc(OCCN(C)C)cc2)N"                                                                                               
YDI SMILES_CANONICAL CACTVS               3.370 "CN(C)CCOc1ccc(cc1)c2sc(NC(N)=O)c(c2)C(N)=O"                                                                                             
YDI SMILES           CACTVS               3.370 "CN(C)CCOc1ccc(cc1)c2sc(NC(N)=O)c(c2)C(N)=O"                                                                                             
YDI SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CN(C)CCOc1ccc(cc1)c2cc(c(s2)NC(=O)N)C(=O)N"                                                                                             
YDI SMILES           "OpenEye OEToolkits" 1.7.0 "CN(C)CCOc1ccc(cc1)c2cc(c(s2)NC(=O)N)C(=O)N"                                                                                             
YDI InChI            InChI                1.03  "InChI=1S/C16H20N4O3S/c1-20(2)7-8-23-11-5-3-10(4-6-11)13-9-12(14(17)21)15(24-13)19-16(18)22/h3-6,9H,7-8H2,1-2H3,(H2,17,21)(H3,18,19,22)" 
YDI InChIKey         InChI                1.03  RFSVVCBVIFWEMZ-UHFFFAOYSA-N                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YDI "SYSTEMATIC NAME" ACDLabs              12.01 "2-(carbamoylamino)-5-{4-[2-(dimethylamino)ethoxy]phenyl}thiophene-3-carboxamide"     
YDI "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "2-(aminocarbonylamino)-5-[4-(2-dimethylaminoethyloxy)phenyl]thiophene-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YDI "Create component"     2011-03-21 EBI  
YDI "Modify aromatic_flag" 2011-06-04 RCSB 
YDI "Modify descriptor"    2011-06-04 RCSB 
# 
