data_AFJ
#

_chem_comp.id                                   AFJ
_chem_comp.name                                 "(2R,4S,5S)-N-butyl-4-hydroxy-2,7-dimethyl-5-{[N-(4-methylpentanoyl)-L-methionyl]amino}octanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H49 N3 O4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(2R,4S,5S)-4-Hydroxy-2,7-dimethyl-5-[(S)-2-(4-methyl-pentanoylamino)-4-methylsulfanyl-butyrylamino]-octanoic acid butylamide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2008-07-21
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       487.739
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    AFJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3DUY
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AFJ  S1    S1    S  0  1  N  N  N  23.904   4.868  16.172    2.793   3.982   0.384  S1    AFJ   1  
AFJ  C2    C2    C  0  1  N  N  N  25.499   5.083  17.031    3.152   2.223   0.645  C2    AFJ   2  
AFJ  C5    C5    C  0  1  N  N  N  26.519   5.800  16.107    1.961   1.384   0.176  C5    AFJ   3  
AFJ  C8    C8    C  0  1  N  N  S  27.937   5.945  16.747    2.264  -0.099   0.396  C8    AFJ   4  
AFJ  N10   N10   N  0  1  N  N  N  27.950   7.018  17.750    3.382  -0.502  -0.460  N10   AFJ   5  
AFJ  C12   C12   C  0  1  N  N  N  27.752   6.811  19.082    4.651  -0.314  -0.045  C12   AFJ   6  
AFJ  O13   O13   O  0  1  N  N  N  27.545   5.711  19.589    4.866   0.188   1.038  O13   AFJ   7  
AFJ  C14   C14   C  0  1  N  N  N  27.793   8.043  19.958    5.801  -0.728  -0.925  C14   AFJ   8  
AFJ  C17   C17   C  0  1  N  N  N  29.015   8.095  20.919    7.122  -0.408  -0.223  C17   AFJ   9  
AFJ  C20   C20   C  0  1  N  N  N  30.387   8.421  20.254    8.290  -0.828  -1.118  C20   AFJ  10  
AFJ  C22   C22   C  0  1  N  N  N  31.558   7.819  21.078    8.291   0.023  -2.389  C22   AFJ  11  
AFJ  C26   C26   C  0  1  N  N  N  30.588   9.957  20.172    9.607  -0.623  -0.366  C26   AFJ  12  
AFJ  C30   C30   C  0  1  N  N  N  29.019   6.219  15.718    1.046  -0.917   0.050  C30   AFJ  13  
AFJ  O31   O31   O  0  1  N  N  N  28.718   6.575  14.578    1.107  -1.754  -0.826  O31   AFJ  14  
AFJ  N32   N32   N  0  1  N  N  N  30.310   6.052  16.116   -0.110  -0.719   0.713  N32   AFJ  15  
AFJ  C34   C34   C  0  1  N  N  S  31.462   6.287  15.230   -1.293  -1.513   0.376  C34   AFJ  16  
AFJ  C36   C36   C  0  1  N  N  S  32.093   4.925  14.801   -2.555  -0.740   0.765  C36   AFJ  17  
AFJ  O38   O38   O  0  1  N  N  N  32.786   4.301  15.898   -2.540  -0.479   2.170  O38   AFJ  18  
AFJ  C40   C40   C  0  1  N  N  N  31.129   3.922  14.081   -2.596   0.585   0.000  C40   AFJ  19  
AFJ  C43   C43   C  0  1  N  N  R  31.796   2.988  13.027   -3.920   1.297   0.283  C43   AFJ  20  
AFJ  C45   C45   C  0  1  N  N  N  30.966   1.683  12.902   -3.895   2.691  -0.347  C45   AFJ  21  
AFJ  C49   C49   C  0  1  N  N  N  31.886   3.619  11.649   -5.055   0.499  -0.306  C49   AFJ  22  
AFJ  O50   O50   O  0  1  N  N  N  30.954   4.293  11.226   -4.827  -0.536  -0.895  O50   AFJ  23  
AFJ  N51   N51   N  0  1  N  N  N  33.017   3.396  10.945   -6.324   0.937  -0.179  N51   AFJ  24  
AFJ  C53   C53   C  0  1  N  N  N  33.218   3.933   9.605   -7.427   0.161  -0.752  C53   AFJ  25  
AFJ  C56   C56   C  0  1  N  N  N  34.468   3.338   8.922   -8.751   0.873  -0.468  C56   AFJ  26  
AFJ  C59   C59   C  0  1  N  N  N  34.418   3.557   7.393   -9.903   0.063  -1.067  C59   AFJ  27  
AFJ  C62   C62   C  0  1  N  N  N  34.752   5.009   6.995  -11.228   0.775  -0.784  C62   AFJ  28  
AFJ  C66   C66   C  0  1  N  N  N  32.450   7.322  15.855   -1.252  -2.838   1.141  C66   AFJ  29  
AFJ  C69   C69   C  0  1  N  N  N  31.826   8.715  16.203   -0.058  -3.667   0.662  C69   AFJ  30  
AFJ  C71   C71   C  0  1  N  N  N  31.477   9.562  14.945    0.056  -4.934   1.511  C71   AFJ  31  
AFJ  C75   C75   C  0  1  N  N  N  32.801   9.514  17.115   -0.261  -4.052  -0.805  C75   AFJ  32  
AFJ  C79   C79   C  0  1  N  N  N  22.794   4.777  17.610    4.296   4.799   0.990  C79   AFJ  33  
AFJ  H2    H2    H  0  1  N  N  N  25.343   5.689  17.936    4.039   1.944   0.076  H2    AFJ  34  
AFJ  H2A   H2A   H  0  1  N  N  N  25.896   4.093  17.301    3.329   2.041   1.705  H2A   AFJ  35  
AFJ  H5    H5    H  0  1  N  N  N  26.618   5.212  15.182    1.074   1.663   0.745  H5    AFJ  36  
AFJ  H5A   H5A   H  0  1  N  N  N  26.137   6.815  15.922    1.784   1.566  -0.884  H5A   AFJ  37  
AFJ  H8    H8    H  0  1  N  N  N  28.157   4.979  17.225    2.528  -0.265   1.441  H8    AFJ  38  
AFJ  HN10  HN10  H  0  0  N  N  N  28.113   7.954  17.437    3.210  -0.903  -1.326  HN10  AFJ  39  
AFJ  H14   H14   H  0  1  N  N  N  27.839   8.925  19.302    5.743  -1.799  -1.119  H14   AFJ  40  
AFJ  H14A  H14A  H  0  0  N  N  N  26.891   8.020  20.587    5.750  -0.185  -1.869  H14A  AFJ  41  
AFJ  H17   H17   H  0  1  N  N  N  28.815   8.880  21.664    7.180   0.663  -0.030  H17   AFJ  42  
AFJ  H17A  H17A  H  0  0  N  N  N  29.114   7.083  21.337    7.173  -0.951   0.720  H17A  AFJ  43  
AFJ  H20   H20   H  0  1  N  N  N  30.383   7.982  19.245    8.184  -1.880  -1.384  H20   AFJ  44  
AFJ  H22   H22   H  0  1  N  N  N  32.432   7.677  20.425    9.123  -0.277  -3.026  H22   AFJ  45  
AFJ  H22A  H22A  H  0  0  N  N  N  31.821   8.505  21.897    7.353  -0.123  -2.924  H22A  AFJ  46  
AFJ  H22B  H22B  H  0  0  N  N  N  31.251   6.849  21.496    8.398   1.074  -2.123  H22B  AFJ  47  
AFJ  H26   H26   H  0  1  N  N  N  30.636  10.376  21.188    9.607  -1.230   0.540  H26   AFJ  48  
AFJ  H26A  H26A  H  0  0  N  N  N  31.526  10.176  19.641   10.439  -0.923  -1.003  H26A  AFJ  49  
AFJ  H26B  H26B  H  0  0  N  N  N  29.745  10.408  19.629    9.714   0.428  -0.100  H26B  AFJ  50  
AFJ  HN32  HN32  H  0  0  N  N  N  30.484   5.756  17.055   -0.158  -0.049   1.414  HN32  AFJ  51  
AFJ  H34   H34   H  0  1  N  N  N  31.134   6.762  14.294   -1.304  -1.712  -0.695  H34   AFJ  52  
AFJ  H36   H36   H  0  1  N  N  N  32.820   5.197  14.022   -3.435  -1.331   0.514  H36   AFJ  53  
AFJ  HO38  HO38  H  0  0  N  N  N  33.696   4.164  15.661   -1.782   0.045   2.464  HO38  AFJ  54  
AFJ  H40   H40   H  0  1  N  N  N  30.681   3.281  14.854   -1.768   1.217   0.323  H40   AFJ  55  
AFJ  H40A  H40A  H  0  0  N  N  N  30.405   4.538  13.528   -2.509   0.391  -1.069  H40A  AFJ  56  
AFJ  H43   H43   H  0  1  N  N  N  32.819   2.791  13.380   -4.061   1.387   1.361  H43   AFJ  57  
AFJ  H45   H45   H  0  1  N  N  N  30.770   1.473  11.840   -4.812   3.221  -0.091  H45   AFJ  58  
AFJ  H45A  H45A  H  0  0  N  N  N  31.529   0.847  13.343   -3.037   3.245   0.032  H45A  AFJ  59  
AFJ  H45B  H45B  H  0  0  N  N  N  30.011   1.804  13.434   -3.819   2.598  -1.430  H45B  AFJ  60  
AFJ  HN51  HN51  H  0  0  N  N  N  33.741   2.843  11.357   -6.506   1.765   0.292  HN51  AFJ  61  
AFJ  H53   H53   H  0  1  N  N  N  32.336   3.691   8.994   -7.286   0.071  -1.829  H53   AFJ  62  
AFJ  H53A  H53A  H  0  0  N  N  N  33.363   5.020   9.693   -7.444  -0.832  -0.303  H53A  AFJ  63  
AFJ  H56   H56   H  0  1  N  N  N  35.365   3.831   9.325   -8.892   0.963   0.609  H56   AFJ  64  
AFJ  H56A  H56A  H  0  0  N  N  N  34.498   2.257   9.122   -8.733   1.866  -0.917  H56A  AFJ  65  
AFJ  H59   H59   H  0  1  N  N  N  35.152   2.888   6.921   -9.763  -0.027  -2.144  H59   AFJ  66  
AFJ  H59A  H59A  H  0  0  N  N  N  33.393   3.343   7.056   -9.921  -0.930  -0.618  H59A  AFJ  67  
AFJ  H62   H62   H  0  1  N  N  N  34.832   5.629   7.900  -11.368   0.865   0.294  H62   AFJ  68  
AFJ  H62A  H62A  H  0  0  N  N  N  35.708   5.029   6.452  -11.210   1.768  -1.232  H62A  AFJ  69  
AFJ  H62B  H62B  H  0  0  N  N  N  33.954   5.405   6.349  -12.049   0.198  -1.210  H62B  AFJ  70  
AFJ  H66   H66   H  0  1  N  N  N  32.838   6.889  16.789   -1.152  -2.639   2.208  H66   AFJ  71  
AFJ  H66A  H66A  H  0  0  N  N  N  33.221   7.511  15.093   -2.174  -3.391   0.960  H66A  AFJ  72  
AFJ  H69   H69   H  0  1  N  N  N  30.880   8.517  16.728    0.854  -3.079   0.761  H69   AFJ  73  
AFJ  H71   H71   H  0  1  N  N  N  31.395  10.622  15.227   -0.857  -5.522   1.412  H71   AFJ  74  
AFJ  H71A  H71A  H  0  0  N  N  N  32.270   9.444  14.192    0.906  -5.525   1.169  H71A  AFJ  75  
AFJ  H71B  H71B  H  0  0  N  N  N  30.519   9.219  14.526    0.200  -4.660   2.556  H71B  AFJ  76  
AFJ  H75   H75   H  0  1  N  N  N  33.739   9.703  16.573   -0.343  -3.149  -1.410  H75   AFJ  77  
AFJ  H75A  H75A  H  0  0  N  N  N  32.340  10.473  17.393    0.590  -4.642  -1.146  H75A  AFJ  78  
AFJ  H75B  H75B  H  0  0  N  N  N  33.013   8.931  18.024   -1.174  -4.639  -0.904  H75B  AFJ  79  
AFJ  H79   H79   H  0  1  N  N  N  23.391   4.759  18.534    4.191   5.878   0.880  H79   AFJ  80  
AFJ  H79A  H79A  H  0  0  N  N  N  22.132   5.656  17.618    4.444   4.553   2.041  H79A  AFJ  81  
AFJ  H79B  H79B  H  0  0  N  N  N  22.187   3.861  17.547    5.154   4.456   0.412  H79B  AFJ  82  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AFJ  S1   C2    SING  N  N   1  
AFJ  S1   C79   SING  N  N   2  
AFJ  C5   C2    SING  N  N   3  
AFJ  C2   H2    SING  N  N   4  
AFJ  C2   H2A   SING  N  N   5  
AFJ  C5   C8    SING  N  N   6  
AFJ  C5   H5    SING  N  N   7  
AFJ  C5   H5A   SING  N  N   8  
AFJ  C30  C8    SING  N  N   9  
AFJ  C8   N10   SING  N  N  10  
AFJ  C8   H8    SING  N  N  11  
AFJ  N10  C12   SING  N  N  12  
AFJ  N10  HN10  SING  N  N  13  
AFJ  C12  O13   DOUB  N  N  14  
AFJ  C12  C14   SING  N  N  15  
AFJ  C14  C17   SING  N  N  16  
AFJ  C14  H14   SING  N  N  17  
AFJ  C14  H14A  SING  N  N  18  
AFJ  C20  C17   SING  N  N  19  
AFJ  C17  H17   SING  N  N  20  
AFJ  C17  H17A  SING  N  N  21  
AFJ  C26  C20   SING  N  N  22  
AFJ  C20  C22   SING  N  N  23  
AFJ  C20  H20   SING  N  N  24  
AFJ  C22  H22   SING  N  N  25  
AFJ  C22  H22A  SING  N  N  26  
AFJ  C22  H22B  SING  N  N  27  
AFJ  C26  H26   SING  N  N  28  
AFJ  C26  H26A  SING  N  N  29  
AFJ  C26  H26B  SING  N  N  30  
AFJ  O31  C30   DOUB  N  N  31  
AFJ  C30  N32   SING  N  N  32  
AFJ  C34  N32   SING  N  N  33  
AFJ  N32  HN32  SING  N  N  34  
AFJ  C36  C34   SING  N  N  35  
AFJ  C34  C66   SING  N  N  36  
AFJ  C34  H34   SING  N  N  37  
AFJ  C40  C36   SING  N  N  38  
AFJ  C36  O38   SING  N  N  39  
AFJ  C36  H36   SING  N  N  40  
AFJ  O38  HO38  SING  N  N  41  
AFJ  C43  C40   SING  N  N  42  
AFJ  C40  H40   SING  N  N  43  
AFJ  C40  H40A  SING  N  N  44  
AFJ  C49  C43   SING  N  N  45  
AFJ  C45  C43   SING  N  N  46  
AFJ  C43  H43   SING  N  N  47  
AFJ  C45  H45   SING  N  N  48  
AFJ  C45  H45A  SING  N  N  49  
AFJ  C45  H45B  SING  N  N  50  
AFJ  N51  C49   SING  N  N  51  
AFJ  O50  C49   DOUB  N  N  52  
AFJ  C53  N51   SING  N  N  53  
AFJ  N51  HN51  SING  N  N  54  
AFJ  C56  C53   SING  N  N  55  
AFJ  C53  H53   SING  N  N  56  
AFJ  C53  H53A  SING  N  N  57  
AFJ  C59  C56   SING  N  N  58  
AFJ  C56  H56   SING  N  N  59  
AFJ  C56  H56A  SING  N  N  60  
AFJ  C62  C59   SING  N  N  61  
AFJ  C59  H59   SING  N  N  62  
AFJ  C59  H59A  SING  N  N  63  
AFJ  C62  H62   SING  N  N  64  
AFJ  C62  H62A  SING  N  N  65  
AFJ  C62  H62B  SING  N  N  66  
AFJ  C66  C69   SING  N  N  67  
AFJ  C66  H66   SING  N  N  68  
AFJ  C66  H66A  SING  N  N  69  
AFJ  C71  C69   SING  N  N  70  
AFJ  C69  C75   SING  N  N  71  
AFJ  C69  H69   SING  N  N  72  
AFJ  C71  H71   SING  N  N  73  
AFJ  C71  H71A  SING  N  N  74  
AFJ  C71  H71B  SING  N  N  75  
AFJ  C75  H75   SING  N  N  76  
AFJ  C75  H75A  SING  N  N  77  
AFJ  C75  H75B  SING  N  N  78  
AFJ  C79  H79   SING  N  N  79  
AFJ  C79  H79A  SING  N  N  80  
AFJ  C79  H79B  SING  N  N  81  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AFJ  SMILES            ACDLabs               10.04  "O=C(NC(C(=O)NC(CC(C)C)C(O)CC(C(=O)NCCCC)C)CCSC)CCC(C)C"  
AFJ  SMILES_CANONICAL  CACTVS                3.341  "CCCCNC(=O)[C@H](C)C[C@H](O)[C@H](CC(C)C)NC(=O)[C@H](CCSC)NC(=O)CCC(C)C"  
AFJ  SMILES            CACTVS                3.341  "CCCCNC(=O)[CH](C)C[CH](O)[CH](CC(C)C)NC(=O)[CH](CCSC)NC(=O)CCC(C)C"  
AFJ  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CCCCNC(=O)[C@H](C)C[C@@H]([C@H](CC(C)C)NC(=O)[C@H](CCSC)NC(=O)CCC(C)C)O"  
AFJ  SMILES            "OpenEye OEToolkits"  1.5.0  "CCCCNC(=O)C(C)CC(C(CC(C)C)NC(=O)C(CCSC)NC(=O)CCC(C)C)O"  
AFJ  InChI             InChI                 1.03   "InChI=1S/C25H49N3O4S/c1-8-9-13-26-24(31)19(6)16-22(29)21(15-18(4)5)28-25(32)20(12-14-33-7)27-23(30)11-10-17(2)3/h17-22,29H,8-16H2,1-7H3,(H,26,31)(H,27,30)(H,28,32)/t19-,20+,21+,22+/m1/s1"  
AFJ  InChIKey          InChI                 1.03   XTRMRNMVFXWTCC-MLNNCEHLSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AFJ  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2R,4S,5S)-N-butyl-4-hydroxy-2,7-dimethyl-5-{[N-(4-methylpentanoyl)-L-methionyl]amino}octanamide"  
AFJ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R,4S,5S)-N-butyl-4-hydroxy-2,7-dimethyl-5-[[(2S)-2-(4-methylpentanoylamino)-4-methylsulfanyl-butanoyl]amino]octanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AFJ  "Create component"   2008-07-21  RCSB  
AFJ  "Modify descriptor"  2011-06-04  RCSB  
AFJ  "Modify synonyms"    2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     AFJ
_pdbx_chem_comp_synonyms.name        "(2R,4S,5S)-4-Hydroxy-2,7-dimethyl-5-[(S)-2-(4-methyl-pentanoylamino)-4-methylsulfanyl-butyrylamino]-octanoic acid butylamide"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
