data_VBK
# 
_chem_comp.id                                    VBK 
_chem_comp.name                                  "[(4S)-6,7-dihydro-4H-thieno[3,2-c]pyran-4-yl]methanamine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H11 N O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "4H,6H,7H-thieno[3,2-c]pyran-4-ylmethanamine; 6,7-dihydro-4H-thieno[3,2-c]pyran-4-ylmethanamine; 12225896" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-05-05 
_chem_comp.pdbx_modified_date                    2022-10-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        169.244 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VBK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7OF9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VBK C01 C1  C 0 1 N N S 39.757 26.045 -5.710 -1.355 -0.123 -0.371 C01 VBK 1  
VBK C02 C2  C 0 1 Y N N 39.357 25.106 -4.609 0.134  -0.398 -0.208 C02 VBK 2  
VBK C03 C3  C 0 1 N N N 41.602 23.937 -4.837 0.620  2.046  0.205  C03 VBK 3  
VBK C04 C4  C 0 1 Y N N 40.249 24.129 -4.222 1.013  0.592  0.052  C04 VBK 4  
VBK C05 C5  C 0 1 N N N 41.857 24.953 -5.966 -0.796 2.214  -0.362 C05 VBK 5  
VBK C06 C6  C 0 1 N N N 39.170 27.445 -5.599 -2.159 -1.174 0.396  C06 VBK 6  
VBK C07 C7  C 0 1 Y N N 38.150 25.037 -3.843 0.721  -1.653 -0.308 C07 VBK 7  
VBK C08 C8  C 0 1 Y N N 38.177 24.020 -2.914 2.040  -1.688 -0.134 C08 VBK 8  
VBK N01 N1  N 0 1 N N N 38.873 28.004 -6.886 -3.592 -0.977 0.139  N01 VBK 9  
VBK O01 O1  O 0 1 N N N 41.195 26.200 -5.715 -1.633 1.177  0.157  O01 VBK 10 
VBK S01 S1  S 0 1 Y N N 39.652 23.151 -2.969 2.636  -0.064 0.179  S01 VBK 11 
VBK H01 H1  H 0 1 N N N 39.437 25.613 -6.670 -1.621 -0.156 -1.428 H01 VBK 12 
VBK H02 H2  H 0 1 N N N 41.666 22.920 -5.250 0.630  2.321  1.260  H02 VBK 13 
VBK H03 H3  H 0 1 N N N 42.370 24.066 -4.060 1.317  2.676  -0.347 H03 VBK 14 
VBK H04 H4  H 0 1 N N N 41.484 24.535 -6.913 -1.193 3.185  -0.068 H04 VBK 15 
VBK H05 H5  H 0 1 N N N 42.939 25.133 -6.046 -0.763 2.146  -1.449 H05 VBK 16 
VBK H07 H6  H 0 1 N N N 39.895 28.095 -5.088 -1.865 -2.170 0.065  H07 VBK 17 
VBK H06 H7  H 0 1 N N N 38.242 27.396 -5.010 -1.965 -1.073 1.464  H06 VBK 18 
VBK H08 H8  H 0 1 N N N 37.313 25.706 -3.978 0.144  -2.543 -0.513 H08 VBK 19 
VBK H09 H9  H 0 1 N N N 37.367 23.798 -2.234 2.650  -2.578 -0.178 H09 VBK 20 
VBK H1  H10 H 0 1 N N N 38.491 28.921 -6.772 -3.789 -1.002 -0.850 H1  VBK 21 
VBK H11 H11 H 0 1 N N N 39.712 28.058 -7.427 -4.146 -1.660 0.635  H11 VBK 22 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VBK N01 C06 SING N N 1  
VBK C05 O01 SING N N 2  
VBK C05 C03 SING N N 3  
VBK O01 C01 SING N N 4  
VBK C01 C06 SING N N 5  
VBK C01 C02 SING N N 6  
VBK C03 C04 SING N N 7  
VBK C02 C04 DOUB Y N 8  
VBK C02 C07 SING Y N 9  
VBK C04 S01 SING Y N 10 
VBK C07 C08 DOUB Y N 11 
VBK S01 C08 SING Y N 12 
VBK C01 H01 SING N N 13 
VBK C03 H02 SING N N 14 
VBK C03 H03 SING N N 15 
VBK C05 H04 SING N N 16 
VBK C05 H05 SING N N 17 
VBK C06 H07 SING N N 18 
VBK C06 H06 SING N N 19 
VBK C07 H08 SING N N 20 
VBK C08 H09 SING N N 21 
VBK N01 H1  SING N N 22 
VBK N01 H11 SING N N 23 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VBK InChI            InChI                1.03  "InChI=1S/C8H11NOS/c9-5-7-6-2-4-11-8(6)1-3-10-7/h2,4,7H,1,3,5,9H2/t7-/m1/s1" 
VBK InChIKey         InChI                1.03  NMVKUIFBCHQTHO-SSDOTTSWSA-N                                                  
VBK SMILES_CANONICAL CACTVS               3.385 "NC[C@H]1OCCc2sccc12"                                                        
VBK SMILES           CACTVS               3.385 "NC[CH]1OCCc2sccc12"                                                         
VBK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1csc2c1[C@H](OCC2)CN"                                                      
VBK SMILES           "OpenEye OEToolkits" 2.0.7 "c1csc2c1C(OCC2)CN"                                                          
# 
_pdbx_chem_comp_identifier.comp_id           VBK 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(4~{S})-6,7-dihydro-4~{H}-thieno[3,2-c]pyran-4-yl]methanamine" 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 VBK "4H,6H,7H-thieno[3,2-c]pyran-4-ylmethanamine"       PUBCHEM ? 
2 VBK "6,7-dihydro-4H-thieno[3,2-c]pyran-4-ylmethanamine" PUBCHEM ? 
3 VBK 12225896                                            PUBCHEM ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VBK "Create component" 2021-05-05 PDBE 
VBK "Initial release"  2022-11-02 RCSB 
# 
